| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yceG [C]
Identifier: 157961745
GI number: 157961745
Start: 2333016
End: 2334023
Strand: Direct
Name: yceG [C]
Synonym: Spea_1922
Alternate gene names: 157961745
Gene position: 2333016-2334023 (Clockwise)
Preceding gene: 157961744
Following gene: 157961746
Centisome position: 45.09
GC content: 44.35
Gene sequence:
>1008_bases ATGAAAAAAGCAATAATAGGTCTTCTCGCAACATTTTTTACGCTATTAACTTTGGGCGCTATAGGCGCATATTGGGGATA TAACACGCTGCAAGCCTATGGTGAAGAACCGATTAACATAACGGCTTCTCAGGAGCTAAATATCAAGCGTGGTACCAGCT TTAATCAGTTTATTGCGACTTTAGAATCCGAGCAGTTAATCGATGAAGGCTGGAAACTTAAGTGGTTGGTTCGACTTAAG CCAGAACTCGCCAATATTCGTTCAGGTCTTTATGATGTAACACCAAATGATACGCTTAATAGTCTGCTCGACAAAGTCAT AAGCGGCAAAGAGAAATCATTTGGGGTGACGCTATTAGAGGGGCAAACAATCAAAGAATGGCGTCAGGAGCTTGCTCAGC AACAAAGGCTCACTCAAGAAGAAGATGTGTTTAATCAAGTGTTGCTTGCCAATGGCGATGAGTCTGGGCTGCCTGAAGGA AAATTCTTCCCGGATACTTATCACTACCGTGCGGGGAGTAGCGATAAAGCCTTACTGAACGAAAGCTACTTAAAGATGCA ACTTGAACTTGATAAAGCCTGGCAGGGGCGTCAAAAAGACTTACCGCTAAAGTCGGCTTATGAGCTACTCATTTTAGCGT CAATTATCGAGAAAGAGACCGGAAAAGCGAGTGAGCGTCCATGGATCGCGGCGGTTTTTGTAAACCGCTTGCGTAAAGGG ATGCGCCTGCAAACCGATCCTACGGTGATCTATGGTATGGGTGATAGATACAAAGGTAATATAACCCGCAAAGATCTGCG TGAAACCACAGCCTTTAATACTTACAGAATTAATGGAATGCCACCAACGCCTATTGCCGCGCCGAGTCTAGCGGCGATTC AGGCCGCCGCACATCCTGCGGATGTAAATTATATTTATTTCGTCTCACGAAATGATGGTAGCCATGTCTTTTCAAGAACA CTGAACGAGCATAATCGTGCAGTGAACAAATATCAGAGAAATCGATGA
Upstream 100 bases:
>100_bases ATAGCCTATTTGGGCTTGTCGATGTGTTGGCTATCGCAGATATGCGTTTTAGCCGTGCATCTTTGACTTTAAAGATAAGA GAACAACTCAGTCTGACATT
Downstream 100 bases:
>100_bases ATACACCAGTAACAGCAGCGCAATCAGCCAAATTTATCGTTATCGAAGGGCTAGAAGGGGCAGGCAAGTCAAGCGCGATA GCCCTTGTTCGAGACTTTAT
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKKAIIGLLATFFTLLTLGAIGAYWGYNTLQAYGEEPINITASQELNIKRGTSFNQFIATLESEQLIDEGWKLKWLVRLK PELANIRSGLYDVTPNDTLNSLLDKVISGKEKSFGVTLLEGQTIKEWRQELAQQQRLTQEEDVFNQVLLANGDESGLPEG KFFPDTYHYRAGSSDKALLNESYLKMQLELDKAWQGRQKDLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG MRLQTDPTVIYGMGDRYKGNITRKDLRETTAFNTYRINGMPPTPIAAPSLAAIQAAAHPADVNYIYFVSRNDGSHVFSRT LNEHNRAVNKYQRNR
Sequences:
>Translated_335_residues MKKAIIGLLATFFTLLTLGAIGAYWGYNTLQAYGEEPINITASQELNIKRGTSFNQFIATLESEQLIDEGWKLKWLVRLK PELANIRSGLYDVTPNDTLNSLLDKVISGKEKSFGVTLLEGQTIKEWRQELAQQQRLTQEEDVFNQVLLANGDESGLPEG KFFPDTYHYRAGSSDKALLNESYLKMQLELDKAWQGRQKDLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG MRLQTDPTVIYGMGDRYKGNITRKDLRETTAFNTYRINGMPPTPIAAPSLAAIQAAAHPADVNYIYFVSRNDGSHVFSRT LNEHNRAVNKYQRNR >Mature_335_residues MKKAIIGLLATFFTLLTLGAIGAYWGYNTLQAYGEEPINITASQELNIKRGTSFNQFIATLESEQLIDEGWKLKWLVRLK PELANIRSGLYDVTPNDTLNSLLDKVISGKEKSFGVTLLEGQTIKEWRQELAQQQRLTQEEDVFNQVLLANGDESGLPEG KFFPDTYHYRAGSSDKALLNESYLKMQLELDKAWQGRQKDLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG MRLQTDPTVIYGMGDRYKGNITRKDLRETTAFNTYRINGMPPTPIAAPSLAAIQAAAHPADVNYIYFVSRNDGSHVFSRT LNEHNRAVNKYQRNR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=291, Percent_Identity=42.9553264604811, Blast_Score=236, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37926; Mature: 37926
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAIIGLLATFFTLLTLGAIGAYWGYNTLQAYGEEPINITASQELNIKRGTSFNQFIAT CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHH LESEQLIDEGWKLKWLVRLKPELANIRSGLYDVTPNDTLNSLLDKVISGKEKSFGVTLLE HHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEC GQTIKEWRQELAQQQRLTQEEDVFNQVLLANGDESGLPEGKFFPDTYHYRAGSSDKALLN CCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ESYLKMQLELDKAWQGRQKDLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG HHHEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC MRLQTDPTVIYGMGDRYKGNITRKDLRETTAFNTYRINGMPPTPIAAPSLAAIQAAAHPA CEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCC DVNYIYFVSRNDGSHVFSRTLNEHNRAVNKYQRNR CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKAIIGLLATFFTLLTLGAIGAYWGYNTLQAYGEEPINITASQELNIKRGTSFNQFIAT CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHH LESEQLIDEGWKLKWLVRLKPELANIRSGLYDVTPNDTLNSLLDKVISGKEKSFGVTLLE HHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEC GQTIKEWRQELAQQQRLTQEEDVFNQVLLANGDESGLPEGKFFPDTYHYRAGSSDKALLN CCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ESYLKMQLELDKAWQGRQKDLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG HHHEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC MRLQTDPTVIYGMGDRYKGNITRKDLRETTAFNTYRINGMPPTPIAAPSLAAIQAAAHPA CEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCC DVNYIYFVSRNDGSHVFSRTLNEHNRAVNKYQRNR CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]