| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961682
Identifier: 157961682
GI number: 157961682
Start: 2260562
End: 2262001
Strand: Reverse
Name: 157961682
Synonym: Spea_1858
Alternate gene names: NA
Gene position: 2262001-2260562 (Counterclockwise)
Preceding gene: 157961685
Following gene: 157961681
Centisome position: 43.71
GC content: 49.58
Gene sequence:
>1440_bases ATGAAAAAGACAATTTTAGCAGTATCAGTAGCAGCACTACTATCAGTACCAGCAATGGCAGAGCAGATTGGCCTAGAGCC AGTAAAAGGCGGCATGAGCACCAACCCAGTAGGTGAGATTGGCCTAGAGCCAGTGAGTGACATCACTATTGACCCAGTTT TCAATGGGCTTAACCCAATCGAAGATGACATGCAGGTTCGCCCGCAGCCAGATGAAATGCAAGTTCGTCCACTGCCGGAT GACATGCAAGTGCGTCCATTACCTGACGACATGCAAGGCCGCCCAGTTCTTGAGGGTGACATTGGCCTAAACCCTGTTGA CCAGTTGCCAATTGGCCTCAACCCTGTTGGTGATCATGGTGAGAACTTAGTACCTGAGATGCCATCATTTGAAGACAACG ACGGTGACTTAGACCCAATCGTTGAAGATGTTTTCGACCTGCATCCTGTTGATGATGACATGAGCGTGCGTCCCCTGGAG CCAGTTGTGGGCTTACCTGTTGAGTCACCAATTGGTGTTGACCCAATCTTCGACGGTCTAGACCCTGTTGAAGATGACAT GAGCACTGACCCTGTTGAAGATGACATGACAGTTCGCCCACTGCCATCTGATGATATGGGTACTGACCCTGTTGATAACG AAATGGGTGTTGATCCAATCTTTGACGACATTACTAACCCTGATGACGACATGCAGGTTCGACCAATCCAGCCAGACAAT GGTTTACCAGTTGAAGATCCAATTACAGTTGACCCTGTCGAAGATGACATGCAGGTACGACCGATTGAAGATGACATGCA AGTGCGTCCAATTGAAGATGACATGCAGGTGCGCCCAATCGAGGGCGAGTTACCACCACTAGAAGATGACTTCGCTCATG CTGACCCAATCAAGCAGCCTATCGACAAAGTAGTCGATGACGTTCGCGACGGCTTCGAAGAAGTGAACCAAGGAATCGAC GACAACACAGATGCTATCGGTGACAACACCGACGTTATAGATAAGAACACTGGTCTGATTGGCGACAACACAGATGCTAT CGATAAGAACACTGGCCTGATTGGCGACAACACAGATGCAATCGGCGAGAACACCAGCAACATTGGCAAAAACACCTCTG CCATCGCGGCTAACAAGGAGCAGATTGACTTCAACACGCTAAGTATTAACGACCTATATGGCCACGTTGACCGCTTAGAT ACTCGTATCGATGGTGTACAGGCTTCGATGCACGCAATCACCAACGCGCGTCCCCTGCTACAAGGTGCTGGTCAAACAGC CATTGGCTTTGGTTACGGTTTCGCGGGCAGTGAAGGTTCAGCAGCCATGGGAGTCGCCCACTCATTCGATGCTAACTGGT CAATGTCAGCGACATTCAACGTCACAACGGGTACACAGACTGATGTGTCAGGTGGTGCGGGTGTTCAGTACATTTTCTAA
Upstream 100 bases:
>100_bases CTGACCGACTATAGCGAACGACTTTAACGAATGACTTTAACAGAACTCCCCTGCGGGGAACCCACGGCATAATGCCGACA TTAATAGATGGAACATAGCA
Downstream 100 bases:
>100_bases CTAGAGAATAGTTCAGCCTATGGCTCTTACGAGAGCCATATTTGAAACATTTTCATCAGCGAAGAGTTCAATACTTGCCC ATTAGATTCAAAAGGATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MKKTILAVSVAALLSVPAMAEQIGLEPVKGGMSTNPVGEIGLEPVSDITIDPVFNGLNPIEDDMQVRPQPDEMQVRPLPD DMQVRPLPDDMQGRPVLEGDIGLNPVDQLPIGLNPVGDHGENLVPEMPSFEDNDGDLDPIVEDVFDLHPVDDDMSVRPLE PVVGLPVESPIGVDPIFDGLDPVEDDMSTDPVEDDMTVRPLPSDDMGTDPVDNEMGVDPIFDDITNPDDDMQVRPIQPDN GLPVEDPITVDPVEDDMQVRPIEDDMQVRPIEDDMQVRPIEGELPPLEDDFAHADPIKQPIDKVVDDVRDGFEEVNQGID DNTDAIGDNTDVIDKNTGLIGDNTDAIDKNTGLIGDNTDAIGENTSNIGKNTSAIAANKEQIDFNTLSINDLYGHVDRLD TRIDGVQASMHAITNARPLLQGAGQTAIGFGYGFAGSEGSAAMGVAHSFDANWSMSATFNVTTGTQTDVSGGAGVQYIF
Sequences:
>Translated_479_residues MKKTILAVSVAALLSVPAMAEQIGLEPVKGGMSTNPVGEIGLEPVSDITIDPVFNGLNPIEDDMQVRPQPDEMQVRPLPD DMQVRPLPDDMQGRPVLEGDIGLNPVDQLPIGLNPVGDHGENLVPEMPSFEDNDGDLDPIVEDVFDLHPVDDDMSVRPLE PVVGLPVESPIGVDPIFDGLDPVEDDMSTDPVEDDMTVRPLPSDDMGTDPVDNEMGVDPIFDDITNPDDDMQVRPIQPDN GLPVEDPITVDPVEDDMQVRPIEDDMQVRPIEDDMQVRPIEGELPPLEDDFAHADPIKQPIDKVVDDVRDGFEEVNQGID DNTDAIGDNTDVIDKNTGLIGDNTDAIDKNTGLIGDNTDAIGENTSNIGKNTSAIAANKEQIDFNTLSINDLYGHVDRLD TRIDGVQASMHAITNARPLLQGAGQTAIGFGYGFAGSEGSAAMGVAHSFDANWSMSATFNVTTGTQTDVSGGAGVQYIF >Mature_479_residues MKKTILAVSVAALLSVPAMAEQIGLEPVKGGMSTNPVGEIGLEPVSDITIDPVFNGLNPIEDDMQVRPQPDEMQVRPLPD DMQVRPLPDDMQGRPVLEGDIGLNPVDQLPIGLNPVGDHGENLVPEMPSFEDNDGDLDPIVEDVFDLHPVDDDMSVRPLE PVVGLPVESPIGVDPIFDGLDPVEDDMSTDPVEDDMTVRPLPSDDMGTDPVDNEMGVDPIFDDITNPDDDMQVRPIQPDN GLPVEDPITVDPVEDDMQVRPIEDDMQVRPIEDDMQVRPIEGELPPLEDDFAHADPIKQPIDKVVDDVRDGFEEVNQGID DNTDAIGDNTDVIDKNTGLIGDNTDAIDKNTGLIGDNTDAIGENTSNIGKNTSAIAANKEQIDFNTLSINDLYGHVDRLD TRIDGVQASMHAITNARPLLQGAGQTAIGFGYGFAGSEGSAAMGVAHSFDANWSMSATFNVTTGTQTDVSGGAGVQYIF
Specific function: Unknown
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51426; Mature: 51426
Theoretical pI: Translated: 3.57; Mature: 3.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTILAVSVAALLSVPAMAEQIGLEPVKGGMSTNPVGEIGLEPVSDITIDPVFNGLNPI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCCCC EDDMQVRPQPDEMQVRPLPDDMQVRPLPDDMQGRPVLEGDIGLNPVDQLPIGLNPVGDHG CCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCC ENLVPEMPSFEDNDGDLDPIVEDVFDLHPVDDDMSVRPLEPVVGLPVESPIGVDPIFDGL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCC DPVEDDMSTDPVEDDMTVRPLPSDDMGTDPVDNEMGVDPIFDDITNPDDDMQVRPIQPDN CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCC GLPVEDPITVDPVEDDMQVRPIEDDMQVRPIEDDMQVRPIEGELPPLEDDFAHADPIKQP CCCCCCCEEECCCCCCCEEECCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHH IDKVVDDVRDGFEEVNQGIDDNTDAIGDNTDVIDKNTGLIGDNTDAIDKNTGLIGDNTDA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC IGENTSNIGKNTSAIAANKEQIDFNTLSINDLYGHVDRLDTRIDGVQASMHAITNARPLL CCCCCHHCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QGAGQTAIGFGYGFAGSEGSAAMGVAHSFDANWSMSATFNVTTGTQTDVSGGAGVQYIF HCCCCEEEEECCCCCCCCCCEEECEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEC >Mature Secondary Structure MKKTILAVSVAALLSVPAMAEQIGLEPVKGGMSTNPVGEIGLEPVSDITIDPVFNGLNPI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCCCC EDDMQVRPQPDEMQVRPLPDDMQVRPLPDDMQGRPVLEGDIGLNPVDQLPIGLNPVGDHG CCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCC ENLVPEMPSFEDNDGDLDPIVEDVFDLHPVDDDMSVRPLEPVVGLPVESPIGVDPIFDGL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCC DPVEDDMSTDPVEDDMTVRPLPSDDMGTDPVDNEMGVDPIFDDITNPDDDMQVRPIQPDN CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCC GLPVEDPITVDPVEDDMQVRPIEDDMQVRPIEDDMQVRPIEGELPPLEDDFAHADPIKQP CCCCCCCEEECCCCCCCEEECCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHH IDKVVDDVRDGFEEVNQGIDDNTDAIGDNTDVIDKNTGLIGDNTDAIDKNTGLIGDNTDA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC IGENTSNIGKNTSAIAANKEQIDFNTLSINDLYGHVDRLDTRIDGVQASMHAITNARPLL CCCCCHHCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QGAGQTAIGFGYGFAGSEGSAAMGVAHSFDANWSMSATFNVTTGTQTDVSGGAGVQYIF HCCCCEEEEECCCCCCCCCCEEECEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA