| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961674
Identifier: 157961674
GI number: 157961674
Start: 2250740
End: 2251738
Strand: Reverse
Name: 157961674
Synonym: Spea_1850
Alternate gene names: NA
Gene position: 2251738-2250740 (Counterclockwise)
Preceding gene: 157961675
Following gene: 157961673
Centisome position: 43.52
GC content: 43.44
Gene sequence:
>999_bases ATGTTCGTAATGCCTAACAATGATGATTGGATCCGCGGTTGCCTCTACACCATCGCCATGGGAACTCCATTTTTATTACA GCCTTGGCTTTCTGCACAAACATCAGCCTTTATCGCCCTTGGCGCTATGTTTACATTACGACTCGATCCGCGTTGCAAGC CAAAACAACAAGCTATGGCAATGATGGGGGGAATGTTACTGATGATCCTTTCTGCCATGCTTGGAAAACTCTTACTAGGA CACAGAGAGCTGGCGATTACTGCTCTGTTGATTTTAAGCTATATAGCAGGTCAACCTAAGCCCGAACAAAGCTACTTTAG TTTACTAAGCAAGTTTGTCGCTGCAGCCTTAATGCTTGACGAAATGGGGTTCTCAGCCACATTGAATACTGCGTTAGCCT ACTTTGTAGGCGCTACACTGGCATTTTTACTTACTGTTATACAGACACGCTTTTTGCCGACCCAAGCAAAAAGTTGGTCA CCATGGAATGAATGGCGTGAACTAAGGACTGGCCACCTAAATGGCCCACTTTATGGCTTTACGCTACCCATCACTATCCT AGCTGCAATGTTAACTGCTGATTGGCTAAATGTTCAACATGCCTCTTGGGTCGGCCTAACTGTTCTTTTTGTTATGCATA TTGATGAACAAAATGCATGGGAAAAAGTCAAAATGCGAATAACTGGTACCTTGTTGGGGGTAATCTGTGCTTATGGCACA ATCGTTTACTTACCCATTTGGGGTCTACCTTTAGTGGTCATGTTAGCCGCTCTTTTTATACCGACCTGTTTACGCCAAAA CTATATGCTATTCAGTGGACTCATTACCCTGATAATTTTGCTTATTGTTGACTTAGCAATGCAACAACAGGGAGGGGATG TATTTCTGATCCGCTGGCGCTTTATTGATACGCTAATAGGCTGTGCTTGGGTTGCAGTAAGCCTGCTATTACTCCATATA GGGAAGAAATGGTGGCCCAATAAACCAAAGATAAAATAA
Upstream 100 bases:
>100_bases ATCAGCTACATTGAAGATCTAGTAAATGTACCAATAAAACAGACGGTATTACCTTCTGATATGTTAGTAATCTCTATCAG ACTAAAATTTGGGCCCTCAA
Downstream 100 bases:
>100_bases CAAGTGATTCATCTGTACAAAAAACGCCTTACACGTTGCTCACCTATTCAATTCATTAGTTAAGGTGTTAGAATCCTCTG ACTATACTGAAAGCGAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MFVMPNNDDWIRGCLYTIAMGTPFLLQPWLSAQTSAFIALGAMFTLRLDPRCKPKQQAMAMMGGMLLMILSAMLGKLLLG HRELAITALLILSYIAGQPKPEQSYFSLLSKFVAAALMLDEMGFSATLNTALAYFVGATLAFLLTVIQTRFLPTQAKSWS PWNEWRELRTGHLNGPLYGFTLPITILAAMLTADWLNVQHASWVGLTVLFVMHIDEQNAWEKVKMRITGTLLGVICAYGT IVYLPIWGLPLVVMLAALFIPTCLRQNYMLFSGLITLIILLIVDLAMQQQGGDVFLIRWRFIDTLIGCAWVAVSLLLLHI GKKWWPNKPKIK
Sequences:
>Translated_332_residues MFVMPNNDDWIRGCLYTIAMGTPFLLQPWLSAQTSAFIALGAMFTLRLDPRCKPKQQAMAMMGGMLLMILSAMLGKLLLG HRELAITALLILSYIAGQPKPEQSYFSLLSKFVAAALMLDEMGFSATLNTALAYFVGATLAFLLTVIQTRFLPTQAKSWS PWNEWRELRTGHLNGPLYGFTLPITILAAMLTADWLNVQHASWVGLTVLFVMHIDEQNAWEKVKMRITGTLLGVICAYGT IVYLPIWGLPLVVMLAALFIPTCLRQNYMLFSGLITLIILLIVDLAMQQQGGDVFLIRWRFIDTLIGCAWVAVSLLLLHI GKKWWPNKPKIK >Mature_332_residues MFVMPNNDDWIRGCLYTIAMGTPFLLQPWLSAQTSAFIALGAMFTLRLDPRCKPKQQAMAMMGGMLLMILSAMLGKLLLG HRELAITALLILSYIAGQPKPEQSYFSLLSKFVAAALMLDEMGFSATLNTALAYFVGATLAFLLTVIQTRFLPTQAKSWS PWNEWRELRTGHLNGPLYGFTLPITILAAMLTADWLNVQHASWVGLTVLFVMHIDEQNAWEKVKMRITGTLLGVICAYGT IVYLPIWGLPLVVMLAALFIPTCLRQNYMLFSGLITLIILLIVDLAMQQQGGDVFLIRWRFIDTLIGCAWVAVSLLLLHI GKKWWPNKPKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37197; Mature: 37197
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVMPNNDDWIRGCLYTIAMGTPFLLQPWLSAQTSAFIALGAMFTLRLDPRCKPKQQAMA CEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH MMGGMLLMILSAMLGKLLLGHRELAITALLILSYIAGQPKPEQSYFSLLSKFVAAALMLD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EMGFSATLNTALAYFVGATLAFLLTVIQTRFLPTQAKSWSPWNEWRELRTGHLNGPLYGF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHH TLPITILAAMLTADWLNVQHASWVGLTVLFVMHIDEQNAWEKVKMRITGTLLGVICAYGT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH IVYLPIWGLPLVVMLAALFIPTCLRQNYMLFSGLITLIILLIVDLAMQQQGGDVFLIRWR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH FIDTLIGCAWVAVSLLLLHIGKKWWPNKPKIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFVMPNNDDWIRGCLYTIAMGTPFLLQPWLSAQTSAFIALGAMFTLRLDPRCKPKQQAMA CEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH MMGGMLLMILSAMLGKLLLGHRELAITALLILSYIAGQPKPEQSYFSLLSKFVAAALMLD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EMGFSATLNTALAYFVGATLAFLLTVIQTRFLPTQAKSWSPWNEWRELRTGHLNGPLYGF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHH TLPITILAAMLTADWLNVQHASWVGLTVLFVMHIDEQNAWEKVKMRITGTLLGVICAYGT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH IVYLPIWGLPLVVMLAALFIPTCLRQNYMLFSGLITLIILLIVDLAMQQQGGDVFLIRWR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH FIDTLIGCAWVAVSLLLLHIGKKWWPNKPKIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA