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The map label for this gene is yccT [C]

Identifier: 157961544

GI number: 157961544

Start: 2091983

End: 2092657

Strand: Reverse

Name: yccT [C]

Synonym: Spea_1720

Alternate gene names: 157961544

Gene position: 2092657-2091983 (Counterclockwise)

Preceding gene: 157961547

Following gene: 157961542

Centisome position: 40.44

GC content: 43.85

Gene sequence:

>675_bases
ATGAAGCGTTATGGTCTTGTCTTAAGTAGTGCCTTGAGTAGTGCTCTTCTATTGGTTACCACATCGGCGTTAGCTGAAGT
CACCCTCACAATGCCTTCAAACTCAGAACTCGTACTAGTAAACGGGGTCGATGCTAACGGACGTGAAAAACTAAGCCTGA
ATAATGGTCTCAACCAGATTGCATTTAGATATCTTGGGCGTTACCAACAGCAAGGCTCTCAAAACCAGTTCCAATCAGAT
GTAATTGTCATCAAGTTCGATGAAAGTGATGCTCAACTCTATCTATCTATGCCACGAGTTCGCTCCAACAGCGCAGCTAA
CAAGTTTAATCAGTCCCCAGAAGTGACACTGGAAGACCAAAACAGCAATGCGGTAGCCTTTGAATTGGGGATGCTGATAA
AAAAAGGTCTGCAACTAGGTCGAGACTATGAAGTTGAGATGGCAGCCTATAACGTTACAGATCAAAAAGCGTCGCTAAAC
ATTAAGCCAGCAACAATTTCAACGCCGCAAACAGCTATTCCTGTTGCCACTGCAGTGAGTGTGAGTGCAGCAACAGCGAC
TAAACAAAGTAAAAAAAGCGAGCAGATAAATGTTGGCCAGATGCTCGATTTCTGGTACCAACAGGCCGATGAAGAAACGC
GAAAAGCCTTTAAAAAGCGAATTGAAGACAAGTAA

Upstream 100 bases:

>100_bases
TCCAAGCATTTGCATACAAGTTTGTAATAAAATTATCTTGCGATGCAAATTCAGCGTCCTTCTGCTATAAAGAGGACTTT
AATTGAAATTAGGATCCCGA

Downstream 100 bases:

>100_bases
TCGATCTCAATATGAACTTAAGCCCACTACATGAAAGTGGGCTTTTTTATTAGTCTCTTCATTAGACTTGTTTGGAGGCC
TCTAGGTTCATAAACTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKRYGLVLSSALSSALLLVTTSALAEVTLTMPSNSELVLVNGVDANGREKLSLNNGLNQIAFRYLGRYQQQGSQNQFQSD
VIVIKFDESDAQLYLSMPRVRSNSAANKFNQSPEVTLEDQNSNAVAFELGMLIKKGLQLGRDYEVEMAAYNVTDQKASLN
IKPATISTPQTAIPVATAVSVSAATATKQSKKSEQINVGQMLDFWYQQADEETRKAFKKRIEDK

Sequences:

>Translated_224_residues
MKRYGLVLSSALSSALLLVTTSALAEVTLTMPSNSELVLVNGVDANGREKLSLNNGLNQIAFRYLGRYQQQGSQNQFQSD
VIVIKFDESDAQLYLSMPRVRSNSAANKFNQSPEVTLEDQNSNAVAFELGMLIKKGLQLGRDYEVEMAAYNVTDQKASLN
IKPATISTPQTAIPVATAVSVSAATATKQSKKSEQINVGQMLDFWYQQADEETRKAFKKRIEDK
>Mature_224_residues
MKRYGLVLSSALSSALLLVTTSALAEVTLTMPSNSELVLVNGVDANGREKLSLNNGLNQIAFRYLGRYQQQGSQNQFQSD
VIVIKFDESDAQLYLSMPRVRSNSAANKFNQSPEVTLEDQNSNAVAFELGMLIKKGLQLGRDYEVEMAAYNVTDQKASLN
IKPATISTPQTAIPVATAVSVSAATATKQSKKSEQINVGQMLDFWYQQADEETRKAFKKRIEDK

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=198, Percent_Identity=25.2525252525253, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 24664; Mature: 24664

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYGLVLSSALSSALLLVTTSALAEVTLTMPSNSELVLVNGVDANGREKLSLNNGLNQI
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCCCEEEECCCCHHHH
AFRYLGRYQQQGSQNQFQSDVIVIKFDESDAQLYLSMPRVRSNSAANKFNQSPEVTLEDQ
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHCCCCCCEEEECC
NSNAVAFELGMLIKKGLQLGRDYEVEMAAYNVTDQKASLNIKPATISTPQTAIPVATAVS
CCCEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHH
VSAATATKQSKKSEQINVGQMLDFWYQQADEETRKAFKKRIEDK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRYGLVLSSALSSALLLVTTSALAEVTLTMPSNSELVLVNGVDANGREKLSLNNGLNQI
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCCCEEEECCCCHHHH
AFRYLGRYQQQGSQNQFQSDVIVIKFDESDAQLYLSMPRVRSNSAANKFNQSPEVTLEDQ
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHCCCCCCEEEECC
NSNAVAFELGMLIKKGLQLGRDYEVEMAAYNVTDQKASLNIKPATISTPQTAIPVATAVS
CCCEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHH
VSAATATKQSKKSEQINVGQMLDFWYQQADEETRKAFKKRIEDK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA