Click here to switch to the map view.

The map label for this gene is yhdG [H]

Identifier: 157961535

GI number: 157961535

Start: 2076957

End: 2078213

Strand: Reverse

Name: yhdG [H]

Synonym: Spea_1710

Alternate gene names: 157961535

Gene position: 2078213-2076957 (Counterclockwise)

Preceding gene: 157961536

Following gene: 157961533

Centisome position: 40.16

GC content: 46.7

Gene sequence:

>1257_bases
ATGCAAGCTCACAAATCTCAACTGAGAACACCCCGCTCCTCTTCTGCCACTGATAGCCCATTGGCGCGAAAGATAGGCCT
GCCCCTGCTGACACTTTATGGCTTAGGTACCATGCTCGGCGCAGGGGTTTACGTATTAGTCGGAAAAGTAGCAGCCAATG
CAGGTATGCTCGCCCCGCTCTCCTTTATTGTTGCCGCTATCATTGCCTATGTTACTGCGCTCAGTTACTGTGAGCTAGTA
TCTCGCTTTCCTCAAAGCGCTGGTGAAGCCTGTTATGTTGAGCAGGGCTTTCACCGCCGTTATTACGGCATCATTGTTGG
TTACCTTGTGGTGTTTACTGGCATAGTCTCATCCGCAACACTCATAAATGGTTTTGTCGGCTACTTAGCCCATTTTGTCG
AGATCCCTCGCCATGTCAGCATTTCAGTTATGCTGCTATTACTCGGACTCATTGCGATATGGGGTATTGCTGAATCACTC
TGGCTCACAGCGTTGTTAACTGTCATTGAAGTATTCGGGCTTTTGCTGGTCATTACAATTGCAGGCAGCGCGCTTCCGGC
CTCCATAGATATACAGCAAGCTTTTATTCCAGAAAGCTCACTCGTTTTAGGAGGTGTCCTCAGCGGCGCTTTTCTCGCTT
TTTATGCCTTTATCGGCTTTGAAGATATGGTCAACATTGTTGAAGAGGTTAAGTCTCCAAGCAAAACCATGCCAAGGGGA
ATAATACTGGCATTCATTAGTGCTAGCTTACTCTATGTCATTGTTGCACTAGTCGCAGTCTTCTCTCTTCCCTTAGATCA
ACTTGCGGCCTCAGATGCTCCACTTAAAGATATCCTGCTCCCCCACCATCCCATGGCGGGTACCTTAATCGGCATCATCA
GTCTATTTGCAATTCTAAACGGCATACTCGTTCAGATAATCATGGCAGCTCGTGTTCTTTACGGTATGGCTCGCCAAGGA
CGCTCACCCGCTTTTTTCGCTAAGGTGAACAGCAAAACCCAAACTCCAATCAACGCCACCATTATCATTACCGCAATAGT
GTGCTTTTTCGCACTTTGGCTTCCCCTAGTCACACTGGCCAAAACCACCAGCTTTATTATTCTAATTATTTTCGCTTTAG
TTAATCTGTCACTTTGGCGTGTTCAGCGCCAAACCGCTACAGACAAGACGATTAACCGACGAGGCTGGCCTATTACTGGT
ACTTTGTTGTGCCTTTTTCTATTATCCGTTCAGATTGTTAGCTATGTTTTCACATAA

Upstream 100 bases:

>100_bases
TAGCTCTCCCCCCTTGTTTAGCACCCTATAGCGCCCAAAACAATGGACGCGATGTACTAGACTAAAAGTAGTACTTGTTA
ATCAGCGAATATCCATTCTC

Downstream 100 bases:

>100_bases
ATCAGGCTAATAATGCAAATTTAATGCAAATTTAATGCAAGCATTAGACATCAATAACAGGTTCAGTCTCAACATCATCC
GTTTATATATCCCTATCTAG

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MQAHKSQLRTPRSSSATDSPLARKIGLPLLTLYGLGTMLGAGVYVLVGKVAANAGMLAPLSFIVAAIIAYVTALSYCELV
SRFPQSAGEACYVEQGFHRRYYGIIVGYLVVFTGIVSSATLINGFVGYLAHFVEIPRHVSISVMLLLLGLIAIWGIAESL
WLTALLTVIEVFGLLLVITIAGSALPASIDIQQAFIPESSLVLGGVLSGAFLAFYAFIGFEDMVNIVEEVKSPSKTMPRG
IILAFISASLLYVIVALVAVFSLPLDQLAASDAPLKDILLPHHPMAGTLIGIISLFAILNGILVQIIMAARVLYGMARQG
RSPAFFAKVNSKTQTPINATIIITAIVCFFALWLPLVTLAKTTSFIILIIFALVNLSLWRVQRQTATDKTINRRGWPITG
TLLCLFLLSVQIVSYVFT

Sequences:

>Translated_418_residues
MQAHKSQLRTPRSSSATDSPLARKIGLPLLTLYGLGTMLGAGVYVLVGKVAANAGMLAPLSFIVAAIIAYVTALSYCELV
SRFPQSAGEACYVEQGFHRRYYGIIVGYLVVFTGIVSSATLINGFVGYLAHFVEIPRHVSISVMLLLLGLIAIWGIAESL
WLTALLTVIEVFGLLLVITIAGSALPASIDIQQAFIPESSLVLGGVLSGAFLAFYAFIGFEDMVNIVEEVKSPSKTMPRG
IILAFISASLLYVIVALVAVFSLPLDQLAASDAPLKDILLPHHPMAGTLIGIISLFAILNGILVQIIMAARVLYGMARQG
RSPAFFAKVNSKTQTPINATIIITAIVCFFALWLPLVTLAKTTSFIILIIFALVNLSLWRVQRQTATDKTINRRGWPITG
TLLCLFLLSVQIVSYVFT
>Mature_418_residues
MQAHKSQLRTPRSSSATDSPLARKIGLPLLTLYGLGTMLGAGVYVLVGKVAANAGMLAPLSFIVAAIIAYVTALSYCELV
SRFPQSAGEACYVEQGFHRRYYGIIVGYLVVFTGIVSSATLINGFVGYLAHFVEIPRHVSISVMLLLLGLIAIWGIAESL
WLTALLTVIEVFGLLLVITIAGSALPASIDIQQAFIPESSLVLGGVLSGAFLAFYAFIGFEDMVNIVEEVKSPSKTMPRG
IILAFISASLLYVIVALVAVFSLPLDQLAASDAPLKDILLPHHPMAGTLIGIISLFAILNGILVQIIMAARVLYGMARQG
RSPAFFAKVNSKTQTPINATIIITAIVCFFALWLPLVTLAKTTSFIILIIFALVNLSLWRVQRQTATDKTINRRGWPITG
TLLCLFLLSVQIVSYVFT

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI258614005, Length=411, Percent_Identity=27.7372262773723, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI258614003, Length=411, Percent_Identity=27.7372262773723, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI4507047, Length=416, Percent_Identity=26.9230769230769, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI258645169, Length=411, Percent_Identity=27.2506082725061, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI114326544, Length=440, Percent_Identity=24.5454545454545, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI114326550, Length=440, Percent_Identity=24.5454545454545, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI110347453, Length=360, Percent_Identity=28.6111111111111, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI181337167, Length=384, Percent_Identity=26.5625, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI71999149, Length=391, Percent_Identity=24.2966751918159, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87082250, Length=354, Percent_Identity=24.8587570621469, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786694, Length=361, Percent_Identity=27.1468144044321, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788480, Length=437, Percent_Identity=25.629290617849, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081869, Length=389, Percent_Identity=23.6503856041131, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87082023, Length=404, Percent_Identity=23.5148514851485, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17531343, Length=430, Percent_Identity=26.5116279069767, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17532491, Length=401, Percent_Identity=23.9401496259352, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17533459, Length=196, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI32566699, Length=329, Percent_Identity=25.2279635258359, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24668806, Length=421, Percent_Identity=27.0783847980998, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21356285, Length=421, Percent_Identity=27.0783847980998, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24668802, Length=421, Percent_Identity=27.0783847980998, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24667468, Length=388, Percent_Identity=24.7422680412371, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24666159, Length=406, Percent_Identity=25.3694581280788, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI221512776, Length=406, Percent_Identity=25.3694581280788, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI281366235, Length=422, Percent_Identity=27.4881516587678, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007820, Length=422, Percent_Identity=27.4881516587678, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007818, Length=428, Percent_Identity=28.0373831775701, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI85725152, Length=428, Percent_Identity=28.0373831775701, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI161077963, Length=406, Percent_Identity=24.8768472906404, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221331183, Length=428, Percent_Identity=22.4299065420561, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17647653, Length=428, Percent_Identity=22.4299065420561, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24664379, Length=428, Percent_Identity=22.4299065420561, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004758
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 44977; Mature: 44977

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAHKSQLRTPRSSSATDSPLARKIGLPLLTLYGLGTMLGAGVYVLVGKVAANAGMLAPL
CCCCHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SFIVAAIIAYVTALSYCELVSRFPQSAGEACYVEQGFHRRYYGIIVGYLVVFTGIVSSAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINGFVGYLAHFVEIPRHVSISVMLLLLGLIAIWGIAESLWLTALLTVIEVFGLLLVITI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSALPASIDIQQAFIPESSLVLGGVLSGAFLAFYAFIGFEDMVNIVEEVKSPSKTMPRG
HCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
IILAFISASLLYVIVALVAVFSLPLDQLAASDAPLKDILLPHHPMAGTLIGIISLFAILN
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH
GILVQIIMAARVLYGMARQGRSPAFFAKVNSKTQTPINATIIITAIVCFFALWLPLVTLA
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KTTSFIILIIFALVNLSLWRVQRQTATDKTINRRGWPITGTLLCLFLLSVQIVSYVFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQAHKSQLRTPRSSSATDSPLARKIGLPLLTLYGLGTMLGAGVYVLVGKVAANAGMLAPL
CCCCHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SFIVAAIIAYVTALSYCELVSRFPQSAGEACYVEQGFHRRYYGIIVGYLVVFTGIVSSAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINGFVGYLAHFVEIPRHVSISVMLLLLGLIAIWGIAESLWLTALLTVIEVFGLLLVITI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSALPASIDIQQAFIPESSLVLGGVLSGAFLAFYAFIGFEDMVNIVEEVKSPSKTMPRG
HCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
IILAFISASLLYVIVALVAVFSLPLDQLAASDAPLKDILLPHHPMAGTLIGIISLFAILN
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH
GILVQIIMAARVLYGMARQGRSPAFFAKVNSKTQTPINATIIITAIVCFFALWLPLVTLA
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KTTSFIILIIFALVNLSLWRVQRQTATDKTINRRGWPITGTLLCLFLLSVQIVSYVFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]