| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961524
Identifier: 157961524
GI number: 157961524
Start: 2065361
End: 2065942
Strand: Direct
Name: 157961524
Synonym: Spea_1699
Alternate gene names: NA
Gene position: 2065361-2065942 (Clockwise)
Preceding gene: 157961523
Following gene: 157961530
Centisome position: 39.91
GC content: 44.5
Gene sequence:
>582_bases ATGGCATTTCCATTAATTTGGTTAGGCGCCGCAGCGGTTGGTGCGGCAATTATTGCCGAAGAGCGAGATAAGCAAAAAAA AATTGCGATGAAGCGTAAGCAAGGAAAGGCAAAAAGTGAGCATCTACAGGGGCAATCGGCAGAGCTTGCTCCTAGCATCT GGAAAACTGGCGACAAGATGGTTGCACCTGAGCCTGGCGGGATTGTTTGTTGTTTCGTATTTGGCGTGATTGAGCATACA GGTATTTGGCTTGGTGATAATACGCTGGTGGAACTTCATGGCAGTGGTTTGGTACGCGCAGTATCGATAAAGCGTTTCTT AGCAGGACGCACCGGAAGCCGTATCTATCAAGCTTGCAATCATCAGCATCAAGCCTTAATTGGTGCTCAAGTGCTCGATA GAGCAAAGCAGTCAATTTTTAGTTATCGAGACTATGACTTGTTTGATAATAACTGCCACCGTTTTGTCTGGTATTGTTTA AGTGGTGAAGAGCAACCTTTATCAAGCTTTAGTAAGCTTAACGATAAAATCGGCAACCACTTTTCTGAAGCGGTTTACTG GGATGAAGTGGATTTATACTGA
Upstream 100 bases:
>100_bases TTAATCATGGTTTTAGTTACATTTTTAGTATTTTTCTTCGACAGACACTCAGATAAGTTATCTATAGTTAATTCATGCAC GCCCTTAACTGGAGGATTAA
Downstream 100 bases:
>100_bases TTGGCATTAAATTACATTAAGTCAGCGTTAAACGCCCATAAAAAAACACCGATATGACTCGGTGTTTTTTTATTAATGCA ATGCAAACTATAACGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAFPLIWLGAAAVGAAIIAEERDKQKKIAMKRKQGKAKSEHLQGQSAELAPSIWKTGDKMVAPEPGGIVCCFVFGVIEHT GIWLGDNTLVELHGSGLVRAVSIKRFLAGRTGSRIYQACNHQHQALIGAQVLDRAKQSIFSYRDYDLFDNNCHRFVWYCL SGEEQPLSSFSKLNDKIGNHFSEAVYWDEVDLY
Sequences:
>Translated_193_residues MAFPLIWLGAAAVGAAIIAEERDKQKKIAMKRKQGKAKSEHLQGQSAELAPSIWKTGDKMVAPEPGGIVCCFVFGVIEHT GIWLGDNTLVELHGSGLVRAVSIKRFLAGRTGSRIYQACNHQHQALIGAQVLDRAKQSIFSYRDYDLFDNNCHRFVWYCL SGEEQPLSSFSKLNDKIGNHFSEAVYWDEVDLY >Mature_192_residues AFPLIWLGAAAVGAAIIAEERDKQKKIAMKRKQGKAKSEHLQGQSAELAPSIWKTGDKMVAPEPGGIVCCFVFGVIEHTG IWLGDNTLVELHGSGLVRAVSIKRFLAGRTGSRIYQACNHQHQALIGAQVLDRAKQSIFSYRDYDLFDNNCHRFVWYCLS GEEQPLSSFSKLNDKIGNHFSEAVYWDEVDLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21545; Mature: 21414
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFPLIWLGAAAVGAAIIAEERDKQKKIAMKRKQGKAKSEHLQGQSAELAPSIWKTGDKM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHCCCEE VAPEPGGIVCCFVFGVIEHTGIWLGDNTLVELHGSGLVRAVSIKRFLAGRTGSRIYQACN ECCCCCCEEHHHHHHHHHHCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHC HQHQALIGAQVLDRAKQSIFSYRDYDLFDNNCHRFVWYCLSGEEQPLSSFSKLNDKIGNH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH FSEAVYWDEVDLY HHHHEECCCCCCC >Mature Secondary Structure AFPLIWLGAAAVGAAIIAEERDKQKKIAMKRKQGKAKSEHLQGQSAELAPSIWKTGDKM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHCCCEE VAPEPGGIVCCFVFGVIEHTGIWLGDNTLVELHGSGLVRAVSIKRFLAGRTGSRIYQACN ECCCCCCEEHHHHHHHHHHCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHC HQHQALIGAQVLDRAKQSIFSYRDYDLFDNNCHRFVWYCLSGEEQPLSSFSKLNDKIGNH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH FSEAVYWDEVDLY HHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA