| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961510
Identifier: 157961510
GI number: 157961510
Start: 2044344
End: 2046680
Strand: Reverse
Name: 157961510
Synonym: Spea_1685
Alternate gene names: NA
Gene position: 2046680-2044344 (Counterclockwise)
Preceding gene: 157961511
Following gene: 157961507
Centisome position: 39.55
GC content: 45.87
Gene sequence:
>2337_bases ATGATAAAAAAATGCTTTTTACCCTTAGCACTCCTCTTTAGTGCTTTTAGCTCGAGTGCAAGCCATGCCGGGCAAACATC TCAATTCAATATTCATATCCCTACCCTTGAGGGTGCAATTCAAGTCGATGGCGAATTTAACGAGCCTCAATGGCAGCAAG CCGCGACGACAAATTTACAGTTTGAGACTCGCCCCGGCGAAAACATTGCCGCGCCAGTGCAAACTGAGGTTAAAGTCTAT GCCACCGAATCGAGCCTATTCTTGGCCTTTAGCGCACAAGATCCCAACCCTGAACATATTCGCGCTAACTTAAGTGACAG AGACAGCGTCTGGGGGGATGATCTTGTTGGTATAAAGCTCGATACCTTCAATGATGCCAGATTAGCCTATCAGTTTTTTG TCAACGCCTATGGTGTACAAATGGACTCGATAGAAAACGAGCTAACAGGTAGTGAGAGCGATGCTTGGGATGGTATTTGG TACAGCGCAGCCAAGCGAACCGACACAGGCTACCAAGTAGAGATAGAGCTCCCCTTAAGACTGCTTAACTTTGCTCCTAA GAGCGAGCAAAAATGGGGAGTAGAGTTTATTCGTTTCTACCCTAGAAACGAAGAACATCGCATTTCAAGCCATCAGATAG ATAGAGATAATAACTGTCAACTCTGCCAGTTAGGAGTCGCAACTGGCCTTGCCAATATCCAACAGGGTAACGACTTACAA ATTACCCCCTCCTTCGTGGTTAATCGTAATAGTAGACGCCCCCATAAAGAGAACAGTGATTGGGATAGTGAGAATAACAT TGAGCCTAGCTTAGACGTGCGTTGGGGGATCACCCCCAGTACCCTACTCAGCGCCACGATTAACCCTGACTTTTCTCAAG TCGAAGCCGATGCGGGCCAGTTAGATATTAACTCGACCTTCGCGCTATTTTATCCAGAGAAACGCGCCTTTTTTCTCGAT AATAAAGACTACTTCGATACTCAGCTAAATTTGCTGCATACCCGTAATATTGTCGCGCCAGATTACGGTCTCAAACTGAC CAGTAAAGTCGGCGACCATACATTTGCGACATTAATCACTGATGACACCAACACCAACTTTTTGGTGCCAGGTAACTTAA GTTCTGACATCGCGAGTATCGATAACAAGAGCCAAAATTTCGCAGGTCGTTATCGCTTAGATCTGGGTAAACCGCTGTCA ATTGGCGCGTTAGTGACGGCCAAGAAGAGTGATGATTACCATAACTATGTCACCAGTCTCGATGCTAAATACCAGCCAAC GGAACATGATACCTTCGCTGCCCAGTATGTACTATCGGATACAGAGTACCCCAGCGATCTTTATAAAGCGTTTTGCAGCA ACGATGATTGTTTACCGCAGAACAACTGTGATCTTGACAATTGTGGCATTAATGAGCGCGTGCTACGCACTAACAAACAA GGTGCCTTCGGTGATGATATGTATCTACTTAAATATCAACACGAAACTCGTAGCTGGGACGTGTTCGCTCAATACCTATC AGTTGGCGAAGACTTTCGGGCCGATCTCGGTTTCGTAGAGAATGTGGATTTTACAAAATTTGTTGCCGGCGGTGGCTACA CCTGGTATCCGCAATCAGGATTCTTTAACCAAGTAGAGCTGCGTGGCGATTGGGATATTAGCCATAACCAAGCCGGTGAA AAGTTAGAGCAAGAGGCCGAAGCTAAAATGGAATTTCAAGGCCAGTGGCAAAGCTACACCGCCTTTGGTCTAGTTAATCG CGACCGAGTTGGTAGGCGTCACAACGGTGCCTCACTCGCCATTGACGGTAACACGCAGATGTTCAGCGAGACCATGGGCT GGTTCTACTCCAATATTAAGCCCAGCCGAACACTGTTTTTAGAGCTGGATATCAACTATGGCGATGACATCGATTTTGCC AATGATCAGCTAGGCACAAAGGTGATGTTTAACCCAGGTATCAACTGGAAAGTCACCGATTCTATTGCACTGGATCTATC CCATGTGTACCGCACAATGGACGTGGATGACGGCCGCTTATTTACTGCAAACTTAAGTGACCTACGCCTTAGCTGGTATA TCGATATTCACAACTTTATTCGCATTTCGAGTGTCTACACCGATATCGAACGCGATCCCAGCTTGTATCGATACAGCACG CCAAATGAGCACTATCAGCAATTAGGTAATGAGATCCTCTACGGCTATAAACTCAACCCACAAAGTGTATTTTATTTAGG TTACTCCGATGGTATAAAAGCCGATGACGCCATCGACTCATTGATGAAGACTGAAGAAACCTACTTTATGAAAGTCAGCT ACGCCTGGTTACTCTAG
Upstream 100 bases:
>100_bases GACAAGCTTTGTAACAATATCCTCTAGCAATTACTGTCCAAACAGAGGCTTAAATCTGGCACAATCGCAACAAATAACAG CACAATAACAATTACAACAA
Downstream 100 bases:
>100_bases CGCTCCAGTGAGTTCCGTCATAATGAAAAAAGCAGCCATTTGGCTGCTTTTATCTTCTTTATCTAGCACAGAAACCAATT AACACTCAGCAATACAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MIKKCFLPLALLFSAFSSSASHAGQTSQFNIHIPTLEGAIQVDGEFNEPQWQQAATTNLQFETRPGENIAAPVQTEVKVY ATESSLFLAFSAQDPNPEHIRANLSDRDSVWGDDLVGIKLDTFNDARLAYQFFVNAYGVQMDSIENELTGSESDAWDGIW YSAAKRTDTGYQVEIELPLRLLNFAPKSEQKWGVEFIRFYPRNEEHRISSHQIDRDNNCQLCQLGVATGLANIQQGNDLQ ITPSFVVNRNSRRPHKENSDWDSENNIEPSLDVRWGITPSTLLSATINPDFSQVEADAGQLDINSTFALFYPEKRAFFLD NKDYFDTQLNLLHTRNIVAPDYGLKLTSKVGDHTFATLITDDTNTNFLVPGNLSSDIASIDNKSQNFAGRYRLDLGKPLS IGALVTAKKSDDYHNYVTSLDAKYQPTEHDTFAAQYVLSDTEYPSDLYKAFCSNDDCLPQNNCDLDNCGINERVLRTNKQ GAFGDDMYLLKYQHETRSWDVFAQYLSVGEDFRADLGFVENVDFTKFVAGGGYTWYPQSGFFNQVELRGDWDISHNQAGE KLEQEAEAKMEFQGQWQSYTAFGLVNRDRVGRRHNGASLAIDGNTQMFSETMGWFYSNIKPSRTLFLELDINYGDDIDFA NDQLGTKVMFNPGINWKVTDSIALDLSHVYRTMDVDDGRLFTANLSDLRLSWYIDIHNFIRISSVYTDIERDPSLYRYST PNEHYQQLGNEILYGYKLNPQSVFYLGYSDGIKADDAIDSLMKTEETYFMKVSYAWLL
Sequences:
>Translated_778_residues MIKKCFLPLALLFSAFSSSASHAGQTSQFNIHIPTLEGAIQVDGEFNEPQWQQAATTNLQFETRPGENIAAPVQTEVKVY ATESSLFLAFSAQDPNPEHIRANLSDRDSVWGDDLVGIKLDTFNDARLAYQFFVNAYGVQMDSIENELTGSESDAWDGIW YSAAKRTDTGYQVEIELPLRLLNFAPKSEQKWGVEFIRFYPRNEEHRISSHQIDRDNNCQLCQLGVATGLANIQQGNDLQ ITPSFVVNRNSRRPHKENSDWDSENNIEPSLDVRWGITPSTLLSATINPDFSQVEADAGQLDINSTFALFYPEKRAFFLD NKDYFDTQLNLLHTRNIVAPDYGLKLTSKVGDHTFATLITDDTNTNFLVPGNLSSDIASIDNKSQNFAGRYRLDLGKPLS IGALVTAKKSDDYHNYVTSLDAKYQPTEHDTFAAQYVLSDTEYPSDLYKAFCSNDDCLPQNNCDLDNCGINERVLRTNKQ GAFGDDMYLLKYQHETRSWDVFAQYLSVGEDFRADLGFVENVDFTKFVAGGGYTWYPQSGFFNQVELRGDWDISHNQAGE KLEQEAEAKMEFQGQWQSYTAFGLVNRDRVGRRHNGASLAIDGNTQMFSETMGWFYSNIKPSRTLFLELDINYGDDIDFA NDQLGTKVMFNPGINWKVTDSIALDLSHVYRTMDVDDGRLFTANLSDLRLSWYIDIHNFIRISSVYTDIERDPSLYRYST PNEHYQQLGNEILYGYKLNPQSVFYLGYSDGIKADDAIDSLMKTEETYFMKVSYAWLL >Mature_778_residues MIKKCFLPLALLFSAFSSSASHAGQTSQFNIHIPTLEGAIQVDGEFNEPQWQQAATTNLQFETRPGENIAAPVQTEVKVY ATESSLFLAFSAQDPNPEHIRANLSDRDSVWGDDLVGIKLDTFNDARLAYQFFVNAYGVQMDSIENELTGSESDAWDGIW YSAAKRTDTGYQVEIELPLRLLNFAPKSEQKWGVEFIRFYPRNEEHRISSHQIDRDNNCQLCQLGVATGLANIQQGNDLQ ITPSFVVNRNSRRPHKENSDWDSENNIEPSLDVRWGITPSTLLSATINPDFSQVEADAGQLDINSTFALFYPEKRAFFLD NKDYFDTQLNLLHTRNIVAPDYGLKLTSKVGDHTFATLITDDTNTNFLVPGNLSSDIASIDNKSQNFAGRYRLDLGKPLS IGALVTAKKSDDYHNYVTSLDAKYQPTEHDTFAAQYVLSDTEYPSDLYKAFCSNDDCLPQNNCDLDNCGINERVLRTNKQ GAFGDDMYLLKYQHETRSWDVFAQYLSVGEDFRADLGFVENVDFTKFVAGGGYTWYPQSGFFNQVELRGDWDISHNQAGE KLEQEAEAKMEFQGQWQSYTAFGLVNRDRVGRRHNGASLAIDGNTQMFSETMGWFYSNIKPSRTLFLELDINYGDDIDFA NDQLGTKVMFNPGINWKVTDSIALDLSHVYRTMDVDDGRLFTANLSDLRLSWYIDIHNFIRISSVYTDIERDPSLYRYST PNEHYQQLGNEILYGYKLNPQSVFYLGYSDGIKADDAIDSLMKTEETYFMKVSYAWLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88413; Mature: 88413
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKCFLPLALLFSAFSSSASHAGQTSQFNIHIPTLEGAIQVDGEFNEPQWQQAATTNLQ CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHCCEE FETRPGENIAAPVQTEVKVYATESSLFLAFSAQDPNPEHIRANLSDRDSVWGDDLVGIKL EEECCCCCCCCCCEEEEEEEEECCEEEEEEECCCCCHHHEEECCCCCCCCCCCCEEEEEE DTFNDARLAYQFFVNAYGVQMDSIENELTGSESDAWDGIWYSAAKRTDTGYQVEIELPLR ECCCCHHHHEEEHHHHHCEEEHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCE LLNFAPKSEQKWGVEFIRFYPRNEEHRISSHQIDRDNNCQLCQLGVATGLANIQQGNDLQ EECCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEHHHCHHHCCCCCCEE ITPSFVVNRNSRRPHKENSDWDSENNIEPSLDVRWGITPSTLLSATINPDFSQVEADAGQ ECCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHEEEECCCCHHHHCCCCCE LDINSTFALFYPEKRAFFLDNKDYFDTQLNLLHTRNIVAPDYGLKLTSKVGDHTFATLIT EECCCEEEEEECCCEEEEECCCCCCCCEEEEEEECCEECCCCCCEEECCCCCCEEEEEEE DDTNTNFLVPGNLSSDIASIDNKSQNFAGRYRLDLGKPLSIGALVTAKKSDDYHNYVTSL CCCCCCEEECCCCCHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHC DAKYQPTEHDTFAAQYVLSDTEYPSDLYKAFCSNDDCLPQNNCDLDNCGINERVLRTNKQ CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCC GAFGDDMYLLKYQHETRSWDVFAQYLSVGEDFRADLGFVENVDFTKFVAGGGYTWYPQSG CCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCEEECCCCC FFNQVELRGDWDISHNQAGEKLEQEAEAKMEFQGQWQSYTAFGLVNRDRVGRRHNGASLA CCEEEEEEECCCCCCCHHHHHHHHHHHHCEEECCCCCCEEEEEECCHHHCCCCCCCCEEE IDGNTQMFSETMGWFYSNIKPSRTLFLELDINYGDDIDFANDQLGTKVMFNPGINWKVTD ECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEECC SIALDLSHVYRTMDVDDGRLFTANLSDLRLSWYIDIHNFIRISSVYTDIERDPSLYRYST HHHHHHHHHHHEECCCCCEEEEECCCCEEEEEEEEEHHHEEEHHHHHHHCCCCCEEEECC PNEHYQQLGNEILYGYKLNPQSVFYLGYSDGIKADDAIDSLMKTEETYFMKVSYAWLL CHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEEC >Mature Secondary Structure MIKKCFLPLALLFSAFSSSASHAGQTSQFNIHIPTLEGAIQVDGEFNEPQWQQAATTNLQ CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHCCEE FETRPGENIAAPVQTEVKVYATESSLFLAFSAQDPNPEHIRANLSDRDSVWGDDLVGIKL EEECCCCCCCCCCEEEEEEEEECCEEEEEEECCCCCHHHEEECCCCCCCCCCCCEEEEEE DTFNDARLAYQFFVNAYGVQMDSIENELTGSESDAWDGIWYSAAKRTDTGYQVEIELPLR ECCCCHHHHEEEHHHHHCEEEHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCE LLNFAPKSEQKWGVEFIRFYPRNEEHRISSHQIDRDNNCQLCQLGVATGLANIQQGNDLQ EECCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEHHHCHHHCCCCCCEE ITPSFVVNRNSRRPHKENSDWDSENNIEPSLDVRWGITPSTLLSATINPDFSQVEADAGQ ECCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHEEEECCCCHHHHCCCCCE LDINSTFALFYPEKRAFFLDNKDYFDTQLNLLHTRNIVAPDYGLKLTSKVGDHTFATLIT EECCCEEEEEECCCEEEEECCCCCCCCEEEEEEECCEECCCCCCEEECCCCCCEEEEEEE DDTNTNFLVPGNLSSDIASIDNKSQNFAGRYRLDLGKPLSIGALVTAKKSDDYHNYVTSL CCCCCCEEECCCCCHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHC DAKYQPTEHDTFAAQYVLSDTEYPSDLYKAFCSNDDCLPQNNCDLDNCGINERVLRTNKQ CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCC GAFGDDMYLLKYQHETRSWDVFAQYLSVGEDFRADLGFVENVDFTKFVAGGGYTWYPQSG CCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCEEECCCCC FFNQVELRGDWDISHNQAGEKLEQEAEAKMEFQGQWQSYTAFGLVNRDRVGRRHNGASLA CCEEEEEEECCCCCCCHHHHHHHHHHHHCEEECCCCCCEEEEEECCHHHCCCCCCCCEEE IDGNTQMFSETMGWFYSNIKPSRTLFLELDINYGDDIDFANDQLGTKVMFNPGINWKVTD ECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEECC SIALDLSHVYRTMDVDDGRLFTANLSDLRLSWYIDIHNFIRISSVYTDIERDPSLYRYST HHHHHHHHHHHEECCCCCEEEEECCCCEEEEEEEEEHHHEEEHHHHHHHCCCCCEEEECC PNEHYQQLGNEILYGYKLNPQSVFYLGYSDGIKADDAIDSLMKTEETYFMKVSYAWLL CHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA