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The map label for this gene is ycdZ [H]

Identifier: 157961462

GI number: 157961462

Start: 1981782

End: 1982270

Strand: Direct

Name: ycdZ [H]

Synonym: Spea_1636

Alternate gene names: 157961462

Gene position: 1981782-1982270 (Clockwise)

Preceding gene: 157961461

Following gene: 157961463

Centisome position: 38.3

GC content: 48.26

Gene sequence:

>489_bases
ATGGAAAATCGTTGGCAGATTGCTATTTCAGCTGGGTTACTCGCAGCAGTGTGGGCCGGTGTAGCCGATGCACTTCATCT
TGTGACATGGATAGGTTTTCTAAGCTGCAGCACTTTCTTTGCTCAAACCCATTCAGGTATAAAGGGCATGCTGATGGCGA
TGACGACTAACATGTCAGGTGTTTTCTGGGGTTGGTTAATCATATCGGGTAGCAGCTTCTTCGTATCGCCTTTGGTGGGG
TATACCTTTACCGGGATAGCAACTGCGGCGATGTGCTTACAAGCGAGTTACCAAAAGCTGGCATTTATTCCAGGCGCCTT
TATCGGTTGTTGTATTACCTTTGCTATGGGCGGTGATGTCGCTGCGATTCTTCCGCCACTGTTACTTGGGGCTGTGCTGG
GTTATAGCATGAGTTTACTCACGGGGCAGCTGATTAACCTTACTCAGAAAATGCAGGGCAATGTAGGTGCAGAGGTTGAA
GAATCATAG

Upstream 100 bases:

>100_bases
TATAAAAAAGGTAATTTAGCTCACCTGATACTAATCGACTCAATGTTAGTGGATTGTTTGAGTGGATTGGTCGAGTGGAT
TTAATGTAAAGAGGTTAGCT

Downstream 100 bases:

>100_bases
CGAGTATTGTTGCTGTGAGTTTTACTCAGTCAGATTTAAATTTAGTGTGTGAATAATTATAATAATAGTTACGTATGCCT
CTTACCTCGCTCCATTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MENRWQIAISAGLLAAVWAGVADALHLVTWIGFLSCSTFFAQTHSGIKGMLMAMTTNMSGVFWGWLIISGSSFFVSPLVG
YTFTGIATAAMCLQASYQKLAFIPGAFIGCCITFAMGGDVAAILPPLLLGAVLGYSMSLLTGQLINLTQKMQGNVGAEVE
ES

Sequences:

>Translated_162_residues
MENRWQIAISAGLLAAVWAGVADALHLVTWIGFLSCSTFFAQTHSGIKGMLMAMTTNMSGVFWGWLIISGSSFFVSPLVG
YTFTGIATAAMCLQASYQKLAFIPGAFIGCCITFAMGGDVAAILPPLLLGAVLGYSMSLLTGQLINLTQKMQGNVGAEVE
ES
>Mature_162_residues
MENRWQIAISAGLLAAVWAGVADALHLVTWIGFLSCSTFFAQTHSGIKGMLMAMTTNMSGVFWGWLIISGSSFFVSPLVG
YTFTGIATAAMCLQASYQKLAFIPGAFIGCCITFAMGGDVAAILPPLLLGAVLGYSMSLLTGQLINLTQKMQGNVGAEVE
ES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=136, Percent_Identity=44.1176470588235, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17056; Mature: 17056

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRWQIAISAGLLAAVWAGVADALHLVTWIGFLSCSTFFAQTHSGIKGMLMAMTTNMSG
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
VFWGWLIISGSSFFVSPLVGYTFTGIATAAMCLQASYQKLAFIPGAFIGCCITFAMGGDV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
AAILPPLLLGAVLGYSMSLLTGQLINLTQKMQGNVGAEVEES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MENRWQIAISAGLLAAVWAGVADALHLVTWIGFLSCSTFFAQTHSGIKGMLMAMTTNMSG
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
VFWGWLIISGSSFFVSPLVGYTFTGIATAAMCLQASYQKLAFIPGAFIGCCITFAMGGDV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
AAILPPLLLGAVLGYSMSLLTGQLINLTQKMQGNVGAEVEES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]