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The map label for this gene is tsr [C]

Identifier: 157961455

GI number: 157961455

Start: 1973037

End: 1974908

Strand: Reverse

Name: tsr [C]

Synonym: Spea_1629

Alternate gene names: 157961455

Gene position: 1974908-1973037 (Counterclockwise)

Preceding gene: 157961456

Following gene: 157961450

Centisome position: 38.17

GC content: 47.06

Gene sequence:

>1872_bases
ATGAACTCATATTCGCTCAAGACAAAGATCCTTCTATCAGTTGTGCTAGCCTTTTCCGTCGTAATAGGACTGCTATCATG
GCAAAGTTATTCGAGCCAAAAGCAACTGTTAATGAAAAGCAGTGCCGATCAAGTGCGCCAACTTGGTGAGCAACAAGCAA
AACAGATCCAAGAGTGGCTAGCCGATCGTAAAAGAATCGTAGCCGCAATTGCTGAAAAAGTTGATGGCGATAGCCTAAAT
GTTCTGCAACAGGCTCAACTATCAGGCCCTTTTCAATTGTCCTATTTCGGTTCTCAATCAGGCCAAATGTTAGATTCAGA
TCCTAGCATTGATCGTAGCGGTTACGATCCTCGCAGCCGCGGCTGGTATCAACAAGCCATCGCCAAGCAAACTTCAATTC
TAACCAAACCTTATATCGATGTTGCCTACAATATTCTCGTCGTCACTATGGCACAACCCGCTAAAGGTGGTGTGGTTGGC
AGCGACTTGTCGATTGCTAGCCTAGTGGATAGCGTTAACAATATGCAGTTACCTGCGAAGGGCTACGCCATTATGATGCA
TAAAGATGGCACCGTTATCGCGTATAAAGACCATGCTAAATCAATGGGGCCAATACAGAATATCGACCGTCAGCTTAACG
CTCAACTCCCTTCTAAAAGCCGCCAAACAGATAGCTTATTACCGCTTTATTTTGAAAGTGAAGGGCGTGACAAGCTAGTG
TGGGGCTCTGAGATCCCAAATACTGACTGGGAACTTATCTTTGTTCTCGATAAAGAAACCTTAGAAGCGCCGTTAAGTAA
ATTACTGCTGACCCAACTTGGCTTGTCAGCACTTGCTCTCGTCTTTAGCGTCCTAGCTATCTCATGGTTCTTAACCATTT
TACTCGCGCCACTTGGCCGAGTATCACAAGCCTTAGCCCATATTGCTGACGGTAATGGCGATCTGACTCAACGCATCGAA
GTAGATACTCAGGATGAAGTGGCTGTACTAGCTGCAAGCTTTAACCGGTTTGTGGCAAGCCAACACCAACTAATTAGTCA
TATTCGACAGCTAGCTGGTGAGTTAGATAGCGATGCCCAGCACAGCTTGGCGACCAATCAAACGACAGTAGATGAGTTAC
AACGCCAGCAGCAAGAAGTGGCTATGGTTGCAACAGCCGTAACCGAAATGGCCAGTGCCACCCATGAAATCGCCGCTAAT
GCGGAGAATACTGCTACCGCAGCTCAGCAGTCGGCAACAAGTAGTGAAGAAGGCAAAGGCTTAGTCGATAAGACTCGTAG
CACAATTAACTCGCTGGCAAATGAAGTAGGTGAAGCTACGGATGTTATTGGTGAGCTCAATCTACATGCTCAAGCCATCT
CTGGTATTTTAACTACCATTCAAGGCATTGCAGAGCAAACTAACCTATTAGCATTAAACGCTGCGATTGAAGCGGCCCGC
GCCGGCGAGCAAGGCCGTGGCTTTGCGGTTGTTGCCGATGAAGTCAGAGTCTTATCACGCCGTACTCAGGACTCAACTCA
AGAGATCTACACCACTATCGAGACCTTGCAAAGCACCACTAAAAAAGCGGTACTCTTGATGCAAAGTAGCCAAGGCTTGG
CGAGCGACAGTGTCACCGATGTCAACGCCGCCAGCAAAGCACTTGAAGAGATCACTCAGGCGGTCAATGTGATCTCAGAT
ATGGCAAGTCAAATAGCGACTGCGGCCGAGGAGCAAACTCAGGTGACCAATGAGATCACCCAAAACACCGTCGCGATTAA
GGATGTCACAGATGACATTACCGAGTCGGCGCTTGAGCATCTGAATCAAGCCCAAGCGTTAAAAGATAGAGCCGATAATC
TAAATTCAAAGGTCGATACCTTTATCTTGTAA

Upstream 100 bases:

>100_bases
AAATAGTAAAGTTGAGTGGTTAACTTTCAGTTTCCCACTACTTCAGTCGCCTTATAGCTTACAAGCCTACTTTTCACCTC
AAGCCAAAATTAGACCTGAA

Downstream 100 bases:

>100_bases
AAGACAAGACAACCAGCAATAAATAAAAAAAGGGAAGCCTAGACTGTGAACACAGCTAAGGCTTCCCTTTTTGTTATGGT
TCTAAAGCTTCAGTTCTTTT

Product: Cache sensor containing methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MNSYSLKTKILLSVVLAFSVVIGLLSWQSYSSQKQLLMKSSADQVRQLGEQQAKQIQEWLADRKRIVAAIAEKVDGDSLN
VLQQAQLSGPFQLSYFGSQSGQMLDSDPSIDRSGYDPRSRGWYQQAIAKQTSILTKPYIDVAYNILVVTMAQPAKGGVVG
SDLSIASLVDSVNNMQLPAKGYAIMMHKDGTVIAYKDHAKSMGPIQNIDRQLNAQLPSKSRQTDSLLPLYFESEGRDKLV
WGSEIPNTDWELIFVLDKETLEAPLSKLLLTQLGLSALALVFSVLAISWFLTILLAPLGRVSQALAHIADGNGDLTQRIE
VDTQDEVAVLAASFNRFVASQHQLISHIRQLAGELDSDAQHSLATNQTTVDELQRQQQEVAMVATAVTEMASATHEIAAN
AENTATAAQQSATSSEEGKGLVDKTRSTINSLANEVGEATDVIGELNLHAQAISGILTTIQGIAEQTNLLALNAAIEAAR
AGEQGRGFAVVADEVRVLSRRTQDSTQEIYTTIETLQSTTKKAVLLMQSSQGLASDSVTDVNAASKALEEITQAVNVISD
MASQIATAAEEQTQVTNEITQNTVAIKDVTDDITESALEHLNQAQALKDRADNLNSKVDTFIL

Sequences:

>Translated_623_residues
MNSYSLKTKILLSVVLAFSVVIGLLSWQSYSSQKQLLMKSSADQVRQLGEQQAKQIQEWLADRKRIVAAIAEKVDGDSLN
VLQQAQLSGPFQLSYFGSQSGQMLDSDPSIDRSGYDPRSRGWYQQAIAKQTSILTKPYIDVAYNILVVTMAQPAKGGVVG
SDLSIASLVDSVNNMQLPAKGYAIMMHKDGTVIAYKDHAKSMGPIQNIDRQLNAQLPSKSRQTDSLLPLYFESEGRDKLV
WGSEIPNTDWELIFVLDKETLEAPLSKLLLTQLGLSALALVFSVLAISWFLTILLAPLGRVSQALAHIADGNGDLTQRIE
VDTQDEVAVLAASFNRFVASQHQLISHIRQLAGELDSDAQHSLATNQTTVDELQRQQQEVAMVATAVTEMASATHEIAAN
AENTATAAQQSATSSEEGKGLVDKTRSTINSLANEVGEATDVIGELNLHAQAISGILTTIQGIAEQTNLLALNAAIEAAR
AGEQGRGFAVVADEVRVLSRRTQDSTQEIYTTIETLQSTTKKAVLLMQSSQGLASDSVTDVNAASKALEEITQAVNVISD
MASQIATAAEEQTQVTNEITQNTVAIKDVTDDITESALEHLNQAQALKDRADNLNSKVDTFIL
>Mature_623_residues
MNSYSLKTKILLSVVLAFSVVIGLLSWQSYSSQKQLLMKSSADQVRQLGEQQAKQIQEWLADRKRIVAAIAEKVDGDSLN
VLQQAQLSGPFQLSYFGSQSGQMLDSDPSIDRSGYDPRSRGWYQQAIAKQTSILTKPYIDVAYNILVVTMAQPAKGGVVG
SDLSIASLVDSVNNMQLPAKGYAIMMHKDGTVIAYKDHAKSMGPIQNIDRQLNAQLPSKSRQTDSLLPLYFESEGRDKLV
WGSEIPNTDWELIFVLDKETLEAPLSKLLLTQLGLSALALVFSVLAISWFLTILLAPLGRVSQALAHIADGNGDLTQRIE
VDTQDEVAVLAASFNRFVASQHQLISHIRQLAGELDSDAQHSLATNQTTVDELQRQQQEVAMVATAVTEMASATHEIAAN
AENTATAAQQSATSSEEGKGLVDKTRSTINSLANEVGEATDVIGELNLHAQAISGILTTIQGIAEQTNLLALNAAIEAAR
AGEQGRGFAVVADEVRVLSRRTQDSTQEIYTTIETLQSTTKKAVLLMQSSQGLASDSVTDVNAASKALEEITQAVNVISD
MASQIATAAEEQTQVTNEITQNTVAIKDVTDDITESALEHLNQAQALKDRADNLNSKVDTFIL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=316, Percent_Identity=32.5949367088608, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1788194, Length=349, Percent_Identity=30.6590257879656, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1788195, Length=294, Percent_Identity=28.9115646258503, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1787690, Length=359, Percent_Identity=30.08356545961, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1789453, Length=218, Percent_Identity=34.8623853211009, Blast_Score=81, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67339; Mature: 67339

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYSLKTKILLSVVLAFSVVIGLLSWQSYSSQKQLLMKSSADQVRQLGEQQAKQIQEWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ADRKRIVAAIAEKVDGDSLNVLQQAQLSGPFQLSYFGSQSGQMLDSDPSIDRSGYDPRSR
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GWYQQAIAKQTSILTKPYIDVAYNILVVTMAQPAKGGVVGSDLSIASLVDSVNNMQLPAK
HHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
GYAIMMHKDGTVIAYKDHAKSMGPIQNIDRQLNAQLPSKSRQTDSLLPLYFESEGRDKLV
CEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEE
WGSEIPNTDWELIFVLDKETLEAPLSKLLLTQLGLSALALVFSVLAISWFLTILLAPLGR
ECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQALAHIADGNGDLTQRIEVDTQDEVAVLAASFNRFVASQHQLISHIRQLAGELDSDAQ
HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HSLATNQTTVDELQRQQQEVAMVATAVTEMASATHEIAANAENTATAAQQSATSSEEGKG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
LVDKTRSTINSLANEVGEATDVIGELNLHAQAISGILTTIQGIAEQTNLLALNAAIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
AGEQGRGFAVVADEVRVLSRRTQDSTQEIYTTIETLQSTTKKAVLLMQSSQGLASDSVTD
CCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCH
VNAASKALEEITQAVNVISDMASQIATAAEEQTQVTNEITQNTVAIKDVTDDITESALEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHH
LNQAQALKDRADNLNSKVDTFIL
HHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MNSYSLKTKILLSVVLAFSVVIGLLSWQSYSSQKQLLMKSSADQVRQLGEQQAKQIQEWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ADRKRIVAAIAEKVDGDSLNVLQQAQLSGPFQLSYFGSQSGQMLDSDPSIDRSGYDPRSR
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GWYQQAIAKQTSILTKPYIDVAYNILVVTMAQPAKGGVVGSDLSIASLVDSVNNMQLPAK
HHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
GYAIMMHKDGTVIAYKDHAKSMGPIQNIDRQLNAQLPSKSRQTDSLLPLYFESEGRDKLV
CEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEE
WGSEIPNTDWELIFVLDKETLEAPLSKLLLTQLGLSALALVFSVLAISWFLTILLAPLGR
ECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQALAHIADGNGDLTQRIEVDTQDEVAVLAASFNRFVASQHQLISHIRQLAGELDSDAQ
HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HSLATNQTTVDELQRQQQEVAMVATAVTEMASATHEIAANAENTATAAQQSATSSEEGKG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
LVDKTRSTINSLANEVGEATDVIGELNLHAQAISGILTTIQGIAEQTNLLALNAAIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
AGEQGRGFAVVADEVRVLSRRTQDSTQEIYTTIETLQSTTKKAVLLMQSSQGLASDSVTD
CCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCH
VNAASKALEEITQAVNVISDMASQIATAAEEQTQVTNEITQNTVAIKDVTDDITESALEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHH
LNQAQALKDRADNLNSKVDTFIL
HHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA