| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961395
Identifier: 157961395
GI number: 157961395
Start: 1905297
End: 1905740
Strand: Reverse
Name: 157961395
Synonym: Spea_1569
Alternate gene names: NA
Gene position: 1905740-1905297 (Counterclockwise)
Preceding gene: 157961397
Following gene: 157961394
Centisome position: 36.83
GC content: 45.27
Gene sequence:
>444_bases ATGCGTACTCGCCAGATCTTATGCCCAACAGACTTTTCTGAAACGGCCTCCCACGCCCTAGGCTACGCCATTGAGATGGC AAACTTGTATCAAGTGAATATTCGTTTATTACATGTCATGAGTAAACCTTACGGCGAACACCATTACGACATAGTAGTAG AAAGCGTTGCAGAACTGGAAACTCAACTTGAAGCCTATTCAAACGAAAAACTCGATGCTCTAGTAAAAGAAATTGAACCA CAATTAACTAGCACGCTCCAAGTCAAAACCGCCGTTAGAAGTGGAGATACCTTTGCACAGATCTTAGAGGACAGTATCGA GAGTGACGTTGGCATGATCGTGATCGCCAGCCATGGCCATACAGGTCTTTCTCATATGCTCAATCCTAACGTCTCCGAAA AGCTGGCCAACAAGGCTAAGTGCCCTGTGTTGGTGGTTAAGTGA
Upstream 100 bases:
>100_bases TTATTAACTATGCACTTAGTCGCTTTGTCCTCCCTCCATAAAAGAGTATAAAGTGACTATTCATGAGACTTTACTCCTTA TTTTTACAGAGGGTATTTTT
Downstream 100 bases:
>100_bases TTTAAACAAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGCAAAAGCTAAGACGAAGCTTCGCTCAAGGGAAACAAAAAAAG GTTAAGCTTGACACAAAAAG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Uspa Domain-Containing Protein; Universal Stress Protein Usp
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELETQLEAYSNEKLDALVKEIEP QLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGHTGLSHMLNPNVSEKLANKAKCPVLVVK
Sequences:
>Translated_147_residues MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELETQLEAYSNEKLDALVKEIEP QLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGHTGLSHMLNPNVSEKLANKAKCPVLVVK >Mature_147_residues MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELETQLEAYSNEKLDALVKEIEP QLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGHTGLSHMLNPNVSEKLANKAKCPVLVVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16276; Mature: 16276
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELE CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHHH TQLEAYSNEKLDALVKEIEPQLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGH HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCC TGLSHMLNPNVSEKLANKAKCPVLVVK CCHHHHCCCCHHHHHHCCCCCCEEEEC >Mature Secondary Structure MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELE CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHHH TQLEAYSNEKLDALVKEIEPQLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGH HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCC TGLSHMLNPNVSEKLANKAKCPVLVVK CCHHHHCCCCHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA