| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961394
Identifier: 157961394
GI number: 157961394
Start: 1904527
End: 1905003
Strand: Reverse
Name: 157961394
Synonym: Spea_1568
Alternate gene names: NA
Gene position: 1905003-1904527 (Counterclockwise)
Preceding gene: 157961395
Following gene: 157961393
Centisome position: 36.81
GC content: 43.82
Gene sequence:
>477_bases ATGTTTAGCTATCGATATTCTACTAATATCGTTCGTGTGGCTAAAATGGCTAGTAATTGCAATTTAAAAAATAAGGCAAC AGAGCACCTCAAAGGAGGCTGCCTATGCAACAAGCTACAATATCACGTGACTGGCATGCCTTTCGATGCCGACTTTTGCC ATTGCCGTCACTGCCAACAAAGCACAGGTTCAGTGGTCGGTGCATGGATGGATTTTAAACGCGAACAAGTTACCTGGTTA ACCGAGCTACCGAAAGAATACGCCTCATCAGAACATGTGAGGCGAGGATTTTGCCAGCATTGCGGCAGTCAGGTGAGCTT TCGTGATCTTCGTTACCCGCAATATTTCACCTTGAGTATTAGTACTCTCGATAAGCCGAATATCATCAAGCCTAATTACC ATATCTACACCGACAGCCAACTTGAATGGCTTAACATTCAAGATGAATGCCCAAGGTATAGTCAAAACAGAGGCTAA
Upstream 100 bases:
>100_bases GACCTTAGCACTTCCTAGAAGCGGAGCGTCCTCGCTGTGAGCTTGCGAACGCCCTAGTTCCTAACAGGACGAAGTCCGCT CTAGCATCTAAACCACCGTT
Downstream 100 bases:
>100_bases AAGTTCTAGCTTAGGCAAAATAAATCAGCATCTAAACTGATACTAGGTTTATCTTTTCTTCGGTTCTAGAAGCGCAGCGC CCTAGCAGTGAGCCTGCGAA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Protein GFA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQSTGSVVGAWMDFKREQVTWL TELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSISTLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG
Sequences:
>Translated_158_residues MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQSTGSVVGAWMDFKREQVTWL TELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSISTLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG >Mature_158_residues MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQSTGSVVGAWMDFKREQVTWL TELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSISTLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18446; Mature: 18446
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQ CCCEECCCCHHHHHHHHHCCCCCCHHHHHHCCCEEECCEEEEEECCCCCCCHHHHHHHHH STGSVVGAWMDFKREQVTWLTELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSI HCCCEEEHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEE STLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG EECCCCCEECCCEEEEECCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQ CCCEECCCCHHHHHHHHHCCCCCCHHHHHHCCCEEECCEEEEEECCCCCCCHHHHHHHHH STGSVVGAWMDFKREQVTWLTELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSI HCCCEEEHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEE STLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG EECCCCCEECCCEEEEECCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA