Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961394

Identifier: 157961394

GI number: 157961394

Start: 1904527

End: 1905003

Strand: Reverse

Name: 157961394

Synonym: Spea_1568

Alternate gene names: NA

Gene position: 1905003-1904527 (Counterclockwise)

Preceding gene: 157961395

Following gene: 157961393

Centisome position: 36.81

GC content: 43.82

Gene sequence:

>477_bases
ATGTTTAGCTATCGATATTCTACTAATATCGTTCGTGTGGCTAAAATGGCTAGTAATTGCAATTTAAAAAATAAGGCAAC
AGAGCACCTCAAAGGAGGCTGCCTATGCAACAAGCTACAATATCACGTGACTGGCATGCCTTTCGATGCCGACTTTTGCC
ATTGCCGTCACTGCCAACAAAGCACAGGTTCAGTGGTCGGTGCATGGATGGATTTTAAACGCGAACAAGTTACCTGGTTA
ACCGAGCTACCGAAAGAATACGCCTCATCAGAACATGTGAGGCGAGGATTTTGCCAGCATTGCGGCAGTCAGGTGAGCTT
TCGTGATCTTCGTTACCCGCAATATTTCACCTTGAGTATTAGTACTCTCGATAAGCCGAATATCATCAAGCCTAATTACC
ATATCTACACCGACAGCCAACTTGAATGGCTTAACATTCAAGATGAATGCCCAAGGTATAGTCAAAACAGAGGCTAA

Upstream 100 bases:

>100_bases
GACCTTAGCACTTCCTAGAAGCGGAGCGTCCTCGCTGTGAGCTTGCGAACGCCCTAGTTCCTAACAGGACGAAGTCCGCT
CTAGCATCTAAACCACCGTT

Downstream 100 bases:

>100_bases
AAGTTCTAGCTTAGGCAAAATAAATCAGCATCTAAACTGATACTAGGTTTATCTTTTCTTCGGTTCTAGAAGCGCAGCGC
CCTAGCAGTGAGCCTGCGAA

Product: glutathione-dependent formaldehyde-activating protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Protein GFA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQSTGSVVGAWMDFKREQVTWL
TELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSISTLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG

Sequences:

>Translated_158_residues
MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQSTGSVVGAWMDFKREQVTWL
TELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSISTLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG
>Mature_158_residues
MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQSTGSVVGAWMDFKREQVTWL
TELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSISTLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18446; Mature: 18446

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQ
CCCEECCCCHHHHHHHHHCCCCCCHHHHHHCCCEEECCEEEEEECCCCCCCHHHHHHHHH
STGSVVGAWMDFKREQVTWLTELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSI
HCCCEEEHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEE
STLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG
EECCCCCEECCCEEEEECCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MFSYRYSTNIVRVAKMASNCNLKNKATEHLKGGCLCNKLQYHVTGMPFDADFCHCRHCQQ
CCCEECCCCHHHHHHHHHCCCCCCHHHHHHCCCEEECCEEEEEECCCCCCCHHHHHHHHH
STGSVVGAWMDFKREQVTWLTELPKEYASSEHVRRGFCQHCGSQVSFRDLRYPQYFTLSI
HCCCEEEHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEE
STLDKPNIIKPNYHIYTDSQLEWLNIQDECPRYSQNRG
EECCCCCEECCCEEEEECCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA