Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961395

Identifier: 157961395

GI number: 157961395

Start: 1905297

End: 1905740

Strand: Reverse

Name: 157961395

Synonym: Spea_1569

Alternate gene names: NA

Gene position: 1905740-1905297 (Counterclockwise)

Preceding gene: 157961397

Following gene: 157961394

Centisome position: 36.83

GC content: 45.27

Gene sequence:

>444_bases
ATGCGTACTCGCCAGATCTTATGCCCAACAGACTTTTCTGAAACGGCCTCCCACGCCCTAGGCTACGCCATTGAGATGGC
AAACTTGTATCAAGTGAATATTCGTTTATTACATGTCATGAGTAAACCTTACGGCGAACACCATTACGACATAGTAGTAG
AAAGCGTTGCAGAACTGGAAACTCAACTTGAAGCCTATTCAAACGAAAAACTCGATGCTCTAGTAAAAGAAATTGAACCA
CAATTAACTAGCACGCTCCAAGTCAAAACCGCCGTTAGAAGTGGAGATACCTTTGCACAGATCTTAGAGGACAGTATCGA
GAGTGACGTTGGCATGATCGTGATCGCCAGCCATGGCCATACAGGTCTTTCTCATATGCTCAATCCTAACGTCTCCGAAA
AGCTGGCCAACAAGGCTAAGTGCCCTGTGTTGGTGGTTAAGTGA

Upstream 100 bases:

>100_bases
TTATTAACTATGCACTTAGTCGCTTTGTCCTCCCTCCATAAAAGAGTATAAAGTGACTATTCATGAGACTTTACTCCTTA
TTTTTACAGAGGGTATTTTT

Downstream 100 bases:

>100_bases
TTTAAACAAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGCAAAAGCTAAGACGAAGCTTCGCTCAAGGGAAACAAAAAAAG
GTTAAGCTTGACACAAAAAG

Product: UspA domain-containing protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Uspa Domain-Containing Protein; Universal Stress Protein Usp

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELETQLEAYSNEKLDALVKEIEP
QLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGHTGLSHMLNPNVSEKLANKAKCPVLVVK

Sequences:

>Translated_147_residues
MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELETQLEAYSNEKLDALVKEIEP
QLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGHTGLSHMLNPNVSEKLANKAKCPVLVVK
>Mature_147_residues
MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELETQLEAYSNEKLDALVKEIEP
QLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGHTGLSHMLNPNVSEKLANKAKCPVLVVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16276; Mature: 16276

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELE
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHHH
TQLEAYSNEKLDALVKEIEPQLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGH
HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCC
TGLSHMLNPNVSEKLANKAKCPVLVVK
CCHHHHCCCCHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MRTRQILCPTDFSETASHALGYAIEMANLYQVNIRLLHVMSKPYGEHHYDIVVESVAELE
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHHH
TQLEAYSNEKLDALVKEIEPQLTSTLQVKTAVRSGDTFAQILEDSIESDVGMIVIASHGH
HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCC
TGLSHMLNPNVSEKLANKAKCPVLVVK
CCHHHHCCCCHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA