| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gltT [H]
Identifier: 157961358
GI number: 157961358
Start: 1861254
End: 1862582
Strand: Reverse
Name: gltT [H]
Synonym: Spea_1532
Alternate gene names: 157961358
Gene position: 1862582-1861254 (Counterclockwise)
Preceding gene: 157961360
Following gene: 157961349
Centisome position: 35.99
GC content: 45.6
Gene sequence:
>1329_bases ATGTCTGCTACGAAAACTAAAAAACTCGGCCTCACGAGTAAGATAATTATCGGTATGTTTACCGGTATTATTCTCGGACT CTTACTACGCAATCTGTTTCCAGAGAGTGACTTTATCAAAGAGTACATCACTGAGGGTGTGCTAAATGTAATCGGTACTA TCTTTATCTCAAGCTTGAAAATGCTTGTTGTTCCTCTTGTCTTTGTTTCATTAGTCTGTGGTACTTGTTCGCTAAGTGAA CCCTCTAAAGTAGGTCGCTTAGGTGGCAAGACCATCGCGTTTTATCTATTCACCACAGCCATTGCCCTTTCAATGGCGAT TCTAGTTGCCATTGCTATCCACCCTGGCAATGCCAGTATGGTGACTGAAGGAATGCAGTTTGACGTCAAGCAGGCCCCAA GCCTTTCTGATGTACTTATTAATCTTGTGCCTACCAACCCACTGCATGCGATGAGTGAAGGTAATATGCTGCAGATCATC ATCTTTGCGGTGATCTTTGGTTTTGCTATCTCGCATATTGGTGAACGTGGTGCGCGTGTCGCAGCACTGTTTAACGACCT TAACGAAGTGATCATGCGTGTTGTAACACTTATCATGCAACTTGCTCCTTACGGCGTGTTTGCCCTGATGGCAAAATTGG CGCTCACACTGGGGATGGAAACCTTTGGCAGTGTCGTTAAATACTTCTTCGTAGTACTAGGTGTGTTACTTGTTCATGCA TTCGTGGTGTACCCGGTGCTGCTTAAAGTGTTCTCTGGGCTCAACCCATTCACCTTTATCCGTAAAATCCGTGACGTACA GCTATTTGCATTTAGTACAGCGAGTTCAAACGCGACGCTGCCTGTGACTATTGAGACTGCAGAGCACCGTATGGGCGTGG ATAATAAGATTGCCTCTTTCACCCTGCCACTTGGTGCGACTATTAACATGGATGGCACCGCGATCATGCAAGGCGTTGCG ACCGTCTTTATTGCCCAAGTCTTTGGTATCGAGCTAACAATTACCGATTACGCTATGGTTGTTGTTACAGCAACGCTTGC CTCTATCGGTACTGCCGGTGTACCTGGTGTGGGTCTAATCATGCTTGCCATGGTACTGAACCAAGTCGGTCTGCCTGTTG AGGGTATCGCGCTGATTATTGGTGTAGATAGACTGCTGGATATGGTGCGTACAGCGGTTAACGTAACCGGTGATACAGTA GCAACTGTGGTGATTGCTAAATCTGAAAATGAGTTTAACGAAGAGATCTTCAATGATACTCAAGCGGGTAAAGTCGCTCC AGGTTTCAACGCTCAAGTTCATGCTGAAGAAATGAAGTTGAACAAGTAA
Upstream 100 bases:
>100_bases ACCCGGTAAAACTTAACTTTTACCCCATTTCCTCGGTGTCACTTTCTTGCTAGGCTTTAGAACGCAAATTGAAAAGCATA AAAATTATACAGGAAGCACT
Downstream 100 bases:
>100_bases AAAGCTAGGTTCAATCTAAAAAGGCGTCCAATTGGACGCCTTTTTAATGACTTACTTTCGCTAGTTAAGGCAGCCATTTT ACGCTGGCAAACTGCTAGCT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSATKTKKLGLTSKIIIGMFTGIILGLLLRNLFPESDFIKEYITEGVLNVIGTIFISSLKMLVVPLVFVSLVCGTCSLSE PSKVGRLGGKTIAFYLFTTAIALSMAILVAIAIHPGNASMVTEGMQFDVKQAPSLSDVLINLVPTNPLHAMSEGNMLQII IFAVIFGFAISHIGERGARVAALFNDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGMETFGSVVKYFFVVLGVLLVHA FVVYPVLLKVFSGLNPFTFIRKIRDVQLFAFSTASSNATLPVTIETAEHRMGVDNKIASFTLPLGATINMDGTAIMQGVA TVFIAQVFGIELTITDYAMVVVTATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDTV ATVVIAKSENEFNEEIFNDTQAGKVAPGFNAQVHAEEMKLNK
Sequences:
>Translated_442_residues MSATKTKKLGLTSKIIIGMFTGIILGLLLRNLFPESDFIKEYITEGVLNVIGTIFISSLKMLVVPLVFVSLVCGTCSLSE PSKVGRLGGKTIAFYLFTTAIALSMAILVAIAIHPGNASMVTEGMQFDVKQAPSLSDVLINLVPTNPLHAMSEGNMLQII IFAVIFGFAISHIGERGARVAALFNDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGMETFGSVVKYFFVVLGVLLVHA FVVYPVLLKVFSGLNPFTFIRKIRDVQLFAFSTASSNATLPVTIETAEHRMGVDNKIASFTLPLGATINMDGTAIMQGVA TVFIAQVFGIELTITDYAMVVVTATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDTV ATVVIAKSENEFNEEIFNDTQAGKVAPGFNAQVHAEEMKLNK >Mature_441_residues SATKTKKLGLTSKIIIGMFTGIILGLLLRNLFPESDFIKEYITEGVLNVIGTIFISSLKMLVVPLVFVSLVCGTCSLSEP SKVGRLGGKTIAFYLFTTAIALSMAILVAIAIHPGNASMVTEGMQFDVKQAPSLSDVLINLVPTNPLHAMSEGNMLQIII FAVIFGFAISHIGERGARVAALFNDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGMETFGSVVKYFFVVLGVLLVHAF VVYPVLLKVFSGLNPFTFIRKIRDVQLFAFSTASSNATLPVTIETAEHRMGVDNKIASFTLPLGATINMDGTAIMQGVAT VFIAQVFGIELTITDYAMVVVTATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDTVA TVVIAKSENEFNEEIFNDTQAGKVAPGFNAQVHAEEMKLNK
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=478, Percent_Identity=33.6820083682008, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI40254478, Length=508, Percent_Identity=30.511811023622, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI66773030, Length=400, Percent_Identity=34, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI21314632, Length=414, Percent_Identity=32.8502415458937, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI4827012, Length=334, Percent_Identity=37.7245508982036, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI5032093, Length=375, Percent_Identity=35.4666666666667, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI194239697, Length=292, Percent_Identity=37.6712328767123, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI223468564, Length=250, Percent_Identity=39.2, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI223468566, Length=259, Percent_Identity=38.996138996139, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI262359914, Length=371, Percent_Identity=32.0754716981132, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI301601644, Length=170, Percent_Identity=41.7647058823529, Blast_Score=119, Evalue=4e-27, Organism=Escherichia coli, GI1790514, Length=423, Percent_Identity=35.2245862884161, Blast_Score=248, Evalue=6e-67, Organism=Escherichia coli, GI1789947, Length=439, Percent_Identity=30.5239179954442, Blast_Score=202, Evalue=4e-53, Organism=Escherichia coli, GI1788024, Length=450, Percent_Identity=30.6666666666667, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1789473, Length=385, Percent_Identity=29.0909090909091, Blast_Score=131, Evalue=9e-32, Organism=Caenorhabditis elegans, GI71983099, Length=458, Percent_Identity=32.3144104803493, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71983106, Length=458, Percent_Identity=32.3144104803493, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17537407, Length=419, Percent_Identity=35.799522673031, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI193206505, Length=481, Percent_Identity=32.4324324324324, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71996953, Length=454, Percent_Identity=33.0396475770925, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI193206654, Length=447, Percent_Identity=29.7539149888143, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17541374, Length=392, Percent_Identity=30.8673469387755, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI24583025, Length=445, Percent_Identity=31.9101123595506, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI17137668, Length=445, Percent_Identity=31.9101123595506, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24583023, Length=445, Percent_Identity=31.9101123595506, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI281360481, Length=448, Percent_Identity=29.9107142857143, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI281360483, Length=448, Percent_Identity=29.9107142857143, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI17137666, Length=448, Percent_Identity=29.9107142857143, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 47200; Mature: 47069
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATKTKKLGLTSKIIIGMFTGIILGLLLRNLFPESDFIKEYITEGVLNVIGTIFISSLK CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLVVPLVFVSLVCGTCSLSEPSKVGRLGGKTIAFYLFTTAIALSMAILVAIAIHPGNASM HHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH VTEGMQFDVKQAPSLSDVLINLVPTNPLHAMSEGNMLQIIIFAVIFGFAISHIGERGARV HHCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH AALFNDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGMETFGSVVKYFFVVLGVLLVHA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVVYPVLLKVFSGLNPFTFIRKIRDVQLFAFSTASSNATLPVTIETAEHRMGVDNKIASF HHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCEEEEEEECHHHHCCCCCCHHEE TLPLGATINMDGTAIMQGVATVFIAQVFGIELTITDYAMVVVTATLASIGTAGVPGVGLI EECCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH MLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDTVATVVIAKSENEFNEEIFNDT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCC QAGKVAPGFNAQVHAEEMKLNK CCCCCCCCCCCEEEHHHHCCCC >Mature Secondary Structure SATKTKKLGLTSKIIIGMFTGIILGLLLRNLFPESDFIKEYITEGVLNVIGTIFISSLK CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLVVPLVFVSLVCGTCSLSEPSKVGRLGGKTIAFYLFTTAIALSMAILVAIAIHPGNASM HHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH VTEGMQFDVKQAPSLSDVLINLVPTNPLHAMSEGNMLQIIIFAVIFGFAISHIGERGARV HHCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH AALFNDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGMETFGSVVKYFFVVLGVLLVHA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVVYPVLLKVFSGLNPFTFIRKIRDVQLFAFSTASSNATLPVTIETAEHRMGVDNKIASF HHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCEEEEEEECHHHHCCCCCCHHEE TLPLGATINMDGTAIMQGVATVFIAQVFGIELTITDYAMVVVTATLASIGTAGVPGVGLI EECCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH MLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDTVATVVIAKSENEFNEEIFNDT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCC QAGKVAPGFNAQVHAEEMKLNK CCCCCCCCCCCEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]