| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is astB [H]
Identifier: 157961360
GI number: 157961360
Start: 1865455
End: 1866792
Strand: Reverse
Name: astB [H]
Synonym: Spea_1534
Alternate gene names: 157961360
Gene position: 1866792-1865455 (Counterclockwise)
Preceding gene: 157961362
Following gene: 157961358
Centisome position: 36.08
GC content: 46.26
Gene sequence:
>1338_bases ATGAAGCATTTTGAAGCGAATTTCGACGGACTCGTTGGGCCAACGCACAATTACGCAGGTTTATCATTTGGCAACGTCGC CTCATTAAATAACGCCGCCGCAACCTCAAGCCCAAAAGATGCTGCTAAACAAGGACTCAAAAAAGCAAAAGCGCTAGCCG ATCTCGGTTTAGTTCAAGGAATGCTTGCCCCTCAAGAGCGCCCAGACTTACACACACTACGCAGAATTGGTTTTTCTGGC ACAGATGCTGAAATCCTTAATAAAGCTGCGAAAGAAGCTCCTGCGCTTCTACGTGCATGCTGCAGTGCATCAAGCATGTG GACCGCTAACGCTGCCACCGTATCTCCTAGCGCTGATACCCATGACGGTAAATTACACTTTACCCCGGCCAATCTTGTCG ACAAGTTACACCGCAGTATTGAACCTACGACGACAGGTAACATACTTCAAGCTACGTTTAACGATAGCCGTTATTTCAAA CATCACCAACATCTTCCAGAACATACCAGCTTTGGTGATGAAGGCGCGGCTAACCATACGCGTTTATGCAGTGAGTATGG ACATGCTGGTGTTGAGCTATTTGTCTATGGTCAGGAGGCCACCAATCCATCTGCGCCAAAGCCGCAAAAGTTTCCAGCTC GTCAGACACTCGAAGCATCACAAGCGGTTGCCCGTCTGCATCAATTAGATGATAACGGCACGGTTTATATTCAGCAGAAC CCCGATGTGATTGACCAAGGCGTGTTCCATAACGATGTGATTGCCGTAGGTAACCAAAATGTGTTGTTCTATCATGAGCA AGCTTTTTTAAACACACAGGCAAAACTGACTGAAATCAAAAACAAGTTTGGTGACTCAGCCCTACACTTCGTTGAAGTGC CTACCTCTCAGGTGGCGATTCAAGATGCGGTTAAGAGTTACCTATTTAATACCCAGGTAGTGACCTTACCTTCAGGCGAA ATGGCGATTATTGCGCCAACAAACTGTCAAGAAAATCCAGCAGTTTTTGCTTATCTAAATGAATTAGTGACACTCGATAC CCCAATCAAGCAAGTGCTCTACTTCGATGTGAAGCAGAGCATGCAAAATGGTGGTGGGCCAGCTTGCCTGCGTTTACGTG TAGCGATGAACCAAGATGAAGTTGCCGCGGTTAACCAACATACATTAATGAATGACGCGCTGTTCACTCGCTTAAATCAG TGGGTAGATAAGCATTACCGTGATCGTTTGTTAGTTGAGGACTTAGCCGACCCGCAGTTAGTCATAGAATCGCGAACAGC GCTCGATGAGCTAACACAAATTATGAAGCTAGGCAGTGTTTATCAGTTCCAGAGATAA
Upstream 100 bases:
>100_bases TAAACTCGCTTGTGCGGCACTGTCGCTTAAGTATACTGACCGTAATAATTACAACTCAGAAAAGATATTACAACCTGAGC TACCCTTAAGGAAAACAAGA
Downstream 100 bases:
>100_bases GCTTTTTACTGATCTTAAGTAGACATAAAAAAAACCACCATTACGGTGGTTTTTTCATATGTGGCTATACAGCGGTTCAT TCCATCGGCGTATCAAACAA
Product: succinylarginine dihydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAAATSSPKDAAKQGLKKAKALADLGLVQGMLAPQERPDLHTLRRIGFSG TDAEILNKAAKEAPALLRACCSASSMWTANAATVSPSADTHDGKLHFTPANLVDKLHRSIEPTTTGNILQATFNDSRYFK HHQHLPEHTSFGDEGAANHTRLCSEYGHAGVELFVYGQEATNPSAPKPQKFPARQTLEASQAVARLHQLDDNGTVYIQQN PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLTEIKNKFGDSALHFVEVPTSQVAIQDAVKSYLFNTQVVTLPSGE MAIIAPTNCQENPAVFAYLNELVTLDTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNQDEVAAVNQHTLMNDALFTRLNQ WVDKHYRDRLLVEDLADPQLVIESRTALDELTQIMKLGSVYQFQR
Sequences:
>Translated_445_residues MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAAATSSPKDAAKQGLKKAKALADLGLVQGMLAPQERPDLHTLRRIGFSG TDAEILNKAAKEAPALLRACCSASSMWTANAATVSPSADTHDGKLHFTPANLVDKLHRSIEPTTTGNILQATFNDSRYFK HHQHLPEHTSFGDEGAANHTRLCSEYGHAGVELFVYGQEATNPSAPKPQKFPARQTLEASQAVARLHQLDDNGTVYIQQN PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLTEIKNKFGDSALHFVEVPTSQVAIQDAVKSYLFNTQVVTLPSGE MAIIAPTNCQENPAVFAYLNELVTLDTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNQDEVAAVNQHTLMNDALFTRLNQ WVDKHYRDRLLVEDLADPQLVIESRTALDELTQIMKLGSVYQFQR >Mature_445_residues MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAAATSSPKDAAKQGLKKAKALADLGLVQGMLAPQERPDLHTLRRIGFSG TDAEILNKAAKEAPALLRACCSASSMWTANAATVSPSADTHDGKLHFTPANLVDKLHRSIEPTTTGNILQATFNDSRYFK HHQHLPEHTSFGDEGAANHTRLCSEYGHAGVELFVYGQEATNPSAPKPQKFPARQTLEASQAVARLHQLDDNGTVYIQQN PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLTEIKNKFGDSALHFVEVPTSQVAIQDAVKSYLFNTQVVTLPSGE MAIIAPTNCQENPAVFAYLNELVTLDTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNQDEVAAVNQHTLMNDALFTRLNQ WVDKHYRDRLLVEDLADPQLVIESRTALDELTQIMKLGSVYQFQR
Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]
COG id: COG3724
COG function: function code E; Succinylarginine dihydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788041, Length=445, Percent_Identity=53.4831460674157, Blast_Score=493, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007079 [H]
Pfam domain/function: PF04996 AstB [H]
EC number: =3.5.3.23 [H]
Molecular weight: Translated: 48871; Mature: 48871
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAAATSSPKDAAKQGLKKAKALADLGLVQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MLAPQERPDLHTLRRIGFSGTDAEILNKAAKEAPALLRACCSASSMWTANAATVSPSADT HCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCC HDGKLHFTPANLVDKLHRSIEPTTTGNILQATFNDSRYFKHHQHLPEHTSFGDEGAANHT CCCEEEECHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHH RLCSEYGHAGVELFVYGQEATNPSAPKPQKFPARQTLEASQAVARLHQLDDNGTVYIQQN HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLTEIKNKFGDSALHFVEVPTSQVAI CCHHHCCCCCCCEEEECCCCEEEEEHHHHHCHHHHHHHHHHHHCCCCEEEEECCCHHHHH QDAVKSYLFNTQVVTLPSGEMAIIAPTNCQENPAVFAYLNELVTLDTPIKQVLYFDVKQS HHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH MQNGGGPACLRLRVAMNQDEVAAVNQHTLMNDALFTRLNQWVDKHYRDRLLVEDLADPQL HHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VIESRTALDELTQIMKLGSVYQFQR EEHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAAATSSPKDAAKQGLKKAKALADLGLVQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MLAPQERPDLHTLRRIGFSGTDAEILNKAAKEAPALLRACCSASSMWTANAATVSPSADT HCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCC HDGKLHFTPANLVDKLHRSIEPTTTGNILQATFNDSRYFKHHQHLPEHTSFGDEGAANHT CCCEEEECHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHH RLCSEYGHAGVELFVYGQEATNPSAPKPQKFPARQTLEASQAVARLHQLDDNGTVYIQQN HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLTEIKNKFGDSALHFVEVPTSQVAI CCHHHCCCCCCCEEEECCCCEEEEEHHHHHCHHHHHHHHHHHHCCCCEEEEECCCHHHHH QDAVKSYLFNTQVVTLPSGEMAIIAPTNCQENPAVFAYLNELVTLDTPIKQVLYFDVKQS HHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH MQNGGGPACLRLRVAMNQDEVAAVNQHTLMNDALFTRLNQWVDKHYRDRLLVEDLADPQL HHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VIESRTALDELTQIMKLGSVYQFQR EEHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA