| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hemH [H]
Identifier: 157961355
GI number: 157961355
Start: 1857913
End: 1858908
Strand: Direct
Name: hemH [H]
Synonym: Spea_1529
Alternate gene names: 157961355
Gene position: 1857913-1858908 (Clockwise)
Preceding gene: 157961354
Following gene: 157961356
Centisome position: 35.9
GC content: 46.79
Gene sequence:
>996_bases GTGAGTGACTTAGCCCCGCCGTTTGGTGTGTTACTAGTAAACCTAGGTACCCCTGATTCACCTACCGCTCCAGATGTTAA AAAATTCCTTAAGCAGTTCTTGAGCGACCCCCGAGTGGTCGACCTTTCGCCTTGGATCTGGAAGCCGATTTTGAACGGTA TCATTCTTAATACCCGTCCAGCCAAAGTCGCTAAACTCTATCAGTCTATCTGGTGGGATGAAGGTTCACCTTTGATGGTA ATAAGCCAAAAACAGCGCGATAAACTTAAAACGTCATTACATGAGTCACTCGGACAAGCCATTCCAGTGGAACTTGGCAT GAGCTATGGCAATCCGTCATTGCAATCGGGGCTCGACAGCTTAAAGTCTCAAGGGGCTGAAAAGATCTTCGTTCTGCCAC TTTACGCACAATACTCATGCTCTACCGTTGCCCCAGTTTATGATGCAATTGCACAGCTTTTAAAGTCTGAACGCAACATC CCAGAAATGCGCATTAACAAGCAGTATTTTGATCATCCAGCCTACATTAAGGCGTTAGCTGAGTCGGTTAAGACCCATTG GCAACTCAAAGGTCAGGCTGATGTGCTGCTGATGTCGTTTCATGGTGTGCCGCTTAGATACATTACTGAGGGCGATCCTT ATCAGGCTCAGTGTCAATCGACTGCTGAGCTGGTGGCAAAGGAGTTGGGGTTAACACCTGAGCAGTGGCGAGTCTGCTTC CAATCTCAGTTCGGTAAAGAGGAATGGATAAAGCCCGCTACTGATGAGTTGCTAGAGTCTTTGCCTAAACAAGGGGTTAA GTCAGTGGATATCATGTGTCCTGCATTTTCATCCGATTGCTTAGAAACCTTGGAGGAGATCTCTCAAGAGGGCAAAGCTG AGTTCTTATCGGCAGGGGGAGAGCGCTATGAATTTATTGATTGTCTCAACGATGCACCGGCTCACATTAAGCTATTAGCT AAGCTGGTTGAAGAGCAAACTAGAGGCTGGTATTAA
Upstream 100 bases:
>100_bases AGCTAGTTCTCATATTTTAAAAAGCCCATGTAAATGGGCTTTTTTTATGCTTTTTGCGGTGATAGCCTGACCTGAATATC TTGCCAAAAAGAGAATTCAT
Downstream 100 bases:
>100_bases ATATTCTGACTTCTATAGTGATTTCAGCTAGCGAAAGAGGTGGGGTGTGGTAAAATCCCCCACCTTTTTTGGCATCTAGC CCTTTAAATTCACTATTTTG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase 1; Protoheme ferro-lyase 1 [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSDLAPPFGVLLVNLGTPDSPTAPDVKKFLKQFLSDPRVVDLSPWIWKPILNGIILNTRPAKVAKLYQSIWWDEGSPLMV ISQKQRDKLKTSLHESLGQAIPVELGMSYGNPSLQSGLDSLKSQGAEKIFVLPLYAQYSCSTVAPVYDAIAQLLKSERNI PEMRINKQYFDHPAYIKALAESVKTHWQLKGQADVLLMSFHGVPLRYITEGDPYQAQCQSTAELVAKELGLTPEQWRVCF QSQFGKEEWIKPATDELLESLPKQGVKSVDIMCPAFSSDCLETLEEISQEGKAEFLSAGGERYEFIDCLNDAPAHIKLLA KLVEEQTRGWY
Sequences:
>Translated_331_residues MSDLAPPFGVLLVNLGTPDSPTAPDVKKFLKQFLSDPRVVDLSPWIWKPILNGIILNTRPAKVAKLYQSIWWDEGSPLMV ISQKQRDKLKTSLHESLGQAIPVELGMSYGNPSLQSGLDSLKSQGAEKIFVLPLYAQYSCSTVAPVYDAIAQLLKSERNI PEMRINKQYFDHPAYIKALAESVKTHWQLKGQADVLLMSFHGVPLRYITEGDPYQAQCQSTAELVAKELGLTPEQWRVCF QSQFGKEEWIKPATDELLESLPKQGVKSVDIMCPAFSSDCLETLEEISQEGKAEFLSAGGERYEFIDCLNDAPAHIKLLA KLVEEQTRGWY >Mature_330_residues SDLAPPFGVLLVNLGTPDSPTAPDVKKFLKQFLSDPRVVDLSPWIWKPILNGIILNTRPAKVAKLYQSIWWDEGSPLMVI SQKQRDKLKTSLHESLGQAIPVELGMSYGNPSLQSGLDSLKSQGAEKIFVLPLYAQYSCSTVAPVYDAIAQLLKSERNIP EMRINKQYFDHPAYIKALAESVKTHWQLKGQADVLLMSFHGVPLRYITEGDPYQAQCQSTAELVAKELGLTPEQWRVCFQ SQFGKEEWIKPATDELLESLPKQGVKSVDIMCPAFSSDCLETLEEISQEGKAEFLSAGGERYEFIDCLNDAPAHIKLLAK LVEEQTRGWY
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=333, Percent_Identity=27.9279279279279, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI60499021, Length=333, Percent_Identity=27.9279279279279, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1786681, Length=315, Percent_Identity=49.8412698412698, Blast_Score=321, Evalue=4e-89, Organism=Saccharomyces cerevisiae, GI6324750, Length=332, Percent_Identity=26.5060240963855, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI17864156, Length=345, Percent_Identity=26.0869565217391, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24651774, Length=275, Percent_Identity=25.4545454545455, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI45552018, Length=163, Percent_Identity=28.8343558282209, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 37075; Mature: 36944
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLAPPFGVLLVNLGTPDSPTAPDVKKFLKQFLSDPRVVDLSPWIWKPILNGIILNTRP CCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHCCEEECCCH AKVAKLYQSIWWDEGSPLMVISQKQRDKLKTSLHESLGQAIPVELGMSYGNPSLQSGLDS HHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHH LKSQGAEKIFVLPLYAQYSCSTVAPVYDAIAQLLKSERNIPEMRINKQYFDHPAYIKALA HHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCHHHHCCHHHHHHHH ESVKTHWQLKGQADVLLMSFHGVPLRYITEGDPYQAQCQSTAELVAKELGLTPEQWRVCF HHHHHHEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH QSQFGKEEWIKPATDELLESLPKQGVKSVDIMCPAFSSDCLETLEEISQEGKAEFLSAGG HHHCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC ERYEFIDCLNDAPAHIKLLAKLVEEQTRGWY CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDLAPPFGVLLVNLGTPDSPTAPDVKKFLKQFLSDPRVVDLSPWIWKPILNGIILNTRP CCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHCCEEECCCH AKVAKLYQSIWWDEGSPLMVISQKQRDKLKTSLHESLGQAIPVELGMSYGNPSLQSGLDS HHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHH LKSQGAEKIFVLPLYAQYSCSTVAPVYDAIAQLLKSERNIPEMRINKQYFDHPAYIKALA HHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCHHHHCCHHHHHHHH ESVKTHWQLKGQADVLLMSFHGVPLRYITEGDPYQAQCQSTAELVAKELGLTPEQWRVCF HHHHHHEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH QSQFGKEEWIKPATDELLESLPKQGVKSVDIMCPAFSSDCLETLEEISQEGKAEFLSAGG HHHCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC ERYEFIDCLNDAPAHIKLLAKLVEEQTRGWY CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]