| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961350
Identifier: 157961350
GI number: 157961350
Start: 1852024
End: 1853007
Strand: Direct
Name: 157961350
Synonym: Spea_1524
Alternate gene names: NA
Gene position: 1852024-1853007 (Clockwise)
Preceding gene: 157961347
Following gene: 157961351
Centisome position: 35.79
GC content: 41.36
Gene sequence:
>984_bases ATGGAATATATTGTAGGCGCATATGCCACTGCACCTTCGGCTGAAGGTTGGGAGCCAGAGCTTGAGTCTCTGTATTATCA GCATTTAAAGTCCGAAGATAACATTATTGGTATTGAGCATCCTTTTGTCGGTAAGTTACATCCTTATGATGATGAATGGT TTTTAAGTAATGTCAGTAAGGACTGGCAGTTTGTATTTACCTCAATTCCAGGTGTGATGGGACAGTTAGCGAATAATCCC CACTTTGGTATAGCGTCAACAAATGAAGCCGGTAGACAAGCCGCATTAGTTTTTTATCAGCAGGCTCAACAAGCGATTAT GACATTAAATAATCATCTTGGACGGGAGGCGGTCAGTTTTCTTAAGATTCATACTGCTCCAAAAATATCAAAAAATTCAA CATCATCTATTGCTGCCTTACAATCTTCATTAGAGACAATGTTGTCGTGGGATTGGCACGGAGCAAAACTGGTTATTGAG CATTGTGATGCCTACATAGAAGGCCAAGATGCAGAAAAAGGCTTTATGCGTCTAGAAGATGAGATCTCGGCTGCACAATA CGTTAATAACAAACTACAGAGTGACCTAGGTATTAGTATTAACTGGGGGCGCTCGGCAATTGAGGCGCGCAGTACTAACG GACCTTTGCAGCACATTGAACTGGCTAAGCAAAGCGGATTACTGAAAGGCATTATATTTTCGGGTGCCAGTGATATTGAA GGGCCGTATGGCAAGTGGAAGGATACCCATATGCCTCCGGCTAAAGCTCTCTATATTCCAAGTTATGCACAAGGTTCATT ATTGACCTTTAAAGAGATCGAAAATTCAATTCAAGCGTGTCAACCGCAAAGCTTGAGCTTTATCGGCGGTAAAATTTCTT TGCAACCAAACCGAGCCGATGTTGAGCAACGTGTTTCATATATAAAAAGTTTACTGACCTTGTTGGATCATGCTTTAGAA CCAAATGAAACGTCAGTTTCTTAA
Upstream 100 bases:
>100_bases CACTGCAAACGCATGTTCACAAACAAAATTGCATCTGTACTTACATGGTGGTGTAATAGGTATACCTGTTAGGTTTTTAT TATGATAAGGAAAACGATTG
Downstream 100 bases:
>100_bases AATGGGACGCGGTACTGTTAGATTTCAAATTAAAGTTCAGTGTTTTTAACGGCAAATTTAGCCGTGAAGCGGTGGGGATT TTAGAGATTATGTCTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MEYIVGAYATAPSAEGWEPELESLYYQHLKSEDNIIGIEHPFVGKLHPYDDEWFLSNVSKDWQFVFTSIPGVMGQLANNP HFGIASTNEAGRQAALVFYQQAQQAIMTLNNHLGREAVSFLKIHTAPKISKNSTSSIAALQSSLETMLSWDWHGAKLVIE HCDAYIEGQDAEKGFMRLEDEISAAQYVNNKLQSDLGISINWGRSAIEARSTNGPLQHIELAKQSGLLKGIIFSGASDIE GPYGKWKDTHMPPAKALYIPSYAQGSLLTFKEIENSIQACQPQSLSFIGGKISLQPNRADVEQRVSYIKSLLTLLDHALE PNETSVS
Sequences:
>Translated_327_residues MEYIVGAYATAPSAEGWEPELESLYYQHLKSEDNIIGIEHPFVGKLHPYDDEWFLSNVSKDWQFVFTSIPGVMGQLANNP HFGIASTNEAGRQAALVFYQQAQQAIMTLNNHLGREAVSFLKIHTAPKISKNSTSSIAALQSSLETMLSWDWHGAKLVIE HCDAYIEGQDAEKGFMRLEDEISAAQYVNNKLQSDLGISINWGRSAIEARSTNGPLQHIELAKQSGLLKGIIFSGASDIE GPYGKWKDTHMPPAKALYIPSYAQGSLLTFKEIENSIQACQPQSLSFIGGKISLQPNRADVEQRVSYIKSLLTLLDHALE PNETSVS >Mature_327_residues MEYIVGAYATAPSAEGWEPELESLYYQHLKSEDNIIGIEHPFVGKLHPYDDEWFLSNVSKDWQFVFTSIPGVMGQLANNP HFGIASTNEAGRQAALVFYQQAQQAIMTLNNHLGREAVSFLKIHTAPKISKNSTSSIAALQSSLETMLSWDWHGAKLVIE HCDAYIEGQDAEKGFMRLEDEISAAQYVNNKLQSDLGISINWGRSAIEARSTNGPLQHIELAKQSGLLKGIIFSGASDIE GPYGKWKDTHMPPAKALYIPSYAQGSLLTFKEIENSIQACQPQSLSFIGGKISLQPNRADVEQRVSYIKSLLTLLDHALE PNETSVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the YiaX1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36170; Mature: 36170
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYIVGAYATAPSAEGWEPELESLYYQHLKSEDNIIGIEHPFVGKLHPYDDEWFLSNVSK CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHCCCC DWQFVFTSIPGVMGQLANNPHFGIASTNEAGRQAALVFYQQAQQAIMTLNNHLGREAVSF CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKIHTAPKISKNSTSSIAALQSSLETMLSWDWHGAKLVIEHCDAYIEGQDAEKGFMRLED HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHHCCCCCCHHHHHHHHH EISAAQYVNNKLQSDLGISINWGRSAIEARSTNGPLQHIELAKQSGLLKGIIFSGASDIE HHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCHHHHHHHHHCCCCEEHEECCCCCCC GPYGKWKDTHMPPAKALYIPSYAQGSLLTFKEIENSIQACQPQSLSFIGGKISLQPNRAD CCCCCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHHCCCCCCEEECCEEEECCCHHH VEQRVSYIKSLLTLLDHALEPNETSVS HHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEYIVGAYATAPSAEGWEPELESLYYQHLKSEDNIIGIEHPFVGKLHPYDDEWFLSNVSK CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHCCCC DWQFVFTSIPGVMGQLANNPHFGIASTNEAGRQAALVFYQQAQQAIMTLNNHLGREAVSF CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKIHTAPKISKNSTSSIAALQSSLETMLSWDWHGAKLVIEHCDAYIEGQDAEKGFMRLED HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHHCCCCCCHHHHHHHHH EISAAQYVNNKLQSDLGISINWGRSAIEARSTNGPLQHIELAKQSGLLKGIIFSGASDIE HHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCHHHHHHHHHCCCCEEHEECCCCCCC GPYGKWKDTHMPPAKALYIPSYAQGSLLTFKEIENSIQACQPQSLSFIGGKISLQPNRAD CCCCCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHHCCCCCCEEECCEEEECCCHHH VEQRVSYIKSLLTLLDHALEPNETSVS HHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]