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The map label for this gene is recR [H]

Identifier: 157961351

GI number: 157961351

Start: 1853244

End: 1853843

Strand: Direct

Name: recR [H]

Synonym: Spea_1525

Alternate gene names: 157961351

Gene position: 1853244-1853843 (Clockwise)

Preceding gene: 157961350

Following gene: 157961352

Centisome position: 35.81

GC content: 49.83

Gene sequence:

>600_bases
ATGAAATTTAGTCCACTCGTAGATGAGCTGATCCAGTCACTTCGTTGTTTACCAGGCGTTGGCCCAAAATCTGCCCAAAG
AATGGCGTTTCAACTGCTAGAGCGTGATCGTAAAGCGGGCGCTAAGTTGGCTGATTCGCTAGCTAAAGCTATGTCTGAGG
TGGGTCACTGTCAGTCATGCCGTACCTTCACCGAAGAAACCTATTGCCCGATTTGTGTCAGCACTAAGCGTGGCCACTCA
GAAGTGATCTGTGTGGTTGAAACCCCCGCCGATGTATTAGCAATCGAAGCGGGTGGCCATTTTTCTGGGCGTTACTTCGT
GTTGTTAGGACACCTGTCACCGCTTGATGGTGTGGGGCCTGATGAGCTTGGACTTGATTTACTTGAGCAGCATTTAGCGA
CTGGTGATGTCAGTGAGCTTATTTTAGCAACCAATCCAACCGTAGAAGGTGACGCGACTGCGCACTACATTGCCGATATG
GCAAAACGCCATCAATTGACTGTCAGTCGTATTGCCCACGGCGTCCCCGTTGGTGGCGAGCTAGAGTACGTTGATAGCAC
AACACTTGCGCTTTCTTTTAACGGCCGTTTACCTATGTAA

Upstream 100 bases:

>100_bases
TATGTTAACATCCCCAACCAATCTATTTAGCAAAGCTTTTTCCTTTGGCTATTTAATTCAATTTTAGAGGTGTGCAGCAC
CTTGTTATGCGGAACGTTAA

Downstream 100 bases:

>100_bases
TATTCTTGCCTGTTTAGTCGGTATTGATTAGCTAGTTAAACTTATGAAGTTAAATACTGCTTTTGAACAACAACTTATTT
TAAAATCCAGTTTACGAATA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSCRTFTEETYCPICVSTKRGHS
EVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADM
AKRHQLTVSRIAHGVPVGGELEYVDSTTLALSFNGRLPM

Sequences:

>Translated_199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSCRTFTEETYCPICVSTKRGHS
EVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADM
AKRHQLTVSRIAHGVPVGGELEYVDSTTLALSFNGRLPM
>Mature_199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSCRTFTEETYCPICVSTKRGHS
EVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPDELGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADM
AKRHQLTVSRIAHGVPVGGELEYVDSTTLALSFNGRLPM

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=64.2857142857143, Blast_Score=271, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21373; Mature: 21373

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RTFTEETYCPICVSTKRGHSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGP
HHHHCCCCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH
DELGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADMAKRHQLTVSRIAHGVPVGGE
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPM
EEEECCEEEEEEECCCCCC
>Mature Secondary Structure
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RTFTEETYCPICVSTKRGHSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGP
HHHHCCCCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH
DELGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADMAKRHQLTVSRIAHGVPVGGE
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPM
EEEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA