Click here to switch to the map view.

The map label for this gene is ynfM [H]

Identifier: 157961280

GI number: 157961280

Start: 1768643

End: 1769872

Strand: Direct

Name: ynfM [H]

Synonym: Spea_1454

Alternate gene names: 157961280

Gene position: 1768643-1769872 (Clockwise)

Preceding gene: 157961278

Following gene: 157961282

Centisome position: 34.18

GC content: 43.25

Gene sequence:

>1230_bases
ATGAATACCCGCAGTCAGGCGAAACAAGACGGCAGTGAAATCCGCTTAATCATTGGCTTATCTATTGCCTCAATGGTTAT
TTTTATTAACTTGTACCTAGTCCAAGGCATGCTGCCGCTTATTGCGGACTCTTTTTCTGTATCAAAAAGTCATGCAACAC
TCTTGTTGTCGGTAACCAGCTTTACCATGGCGTTCTCACTGTTACTATTTGCGGTGTTGTCCGATCGAGTTGGTCGTAAA
AAGCCAATTCTAGTCAGCTTATACCTGTTAGTTATTCTCGATTTTTGTGCATTTTTTATTACTGAGTTTAACCAGCTAAT
TTTACTGAGAATGCTACAGGGAGCTTTGCTCGCATCAGTACCTGCTATGGCGATGGCTTATTTTAAAGATGAGCTCGGTA
ATAATGCATTATTGAAAGCTGGTGCAATCTATATTGCCGCTAACAGTGTTGGTGGGATAGCCGGACGCTTGCTAGGTGGT
GGCATGGCGCAGTATTTAGATTGGCAGCAAGCGATGGCACTACTTACCCTAGTGTCATTAATTGGGACACTTGTTGTGAC
TTATTTGCTACCAAAGAGCCATTTTGTAAAACCAGAGGCTGAACTCGGTAGGTGGCCGCTGAAGAAAGCTGACTTTAACG
GTTTTTGCCACCATCTAGCGGATCCTAAATTACGGCTTATTTACCTTATTGGCGGCTTGGCCTTTATGGTGATGGTAAAT
CAGTTTAGTTATATTCAGCTGCACTTGATGGATAATCCTTTTAAGTTAGGCCGCTTTGAAGTGACACTCATTTTCCTTTG
TTACCTCAGCGGGACCTATGCTTCTTATTGTTCGGCTAAATGGCTCGGAAGATTTGGACTCAATAAAGTCTTTATCTGCT
CGGTGTCGGCGTTACTTGCTGGAACCTTGCTTACCTTATTCGATACTTTAGCGGCAATCTTTGCTGGTTTTTTACTTTCA
GCATTTGGCTTCTTCTTAATTCATAGTAGCTGTAACGCTTGGGTAGCCTATAGAGCTAAACAGCATCGCGCTAAAGCCAC
GGCACTGTATCTGTGTAGCTATTACTTAGGCGCTGCGATGGGGGGGCCTTATTTACTGCCATTTTGGCTGGTATGGGGTT
GGCAAGGCGTAGTGCTAGGATCTGTACTTGGATTAATGGTGTTGGTATTCGTCGTATTTAAGCTTGTCCAACCTAAGTCG
GCATCAAGTTCATTATTGATGGATCTGTAA

Upstream 100 bases:

>100_bases
TATAACAAAAATCAATAACTATTGTGTTTTTTAGTTGTTATTCCTATGGGGTGCTCGCTGTTATTCTATCTTACAATGAG
ATAACTTGAGTTAGTCCCCC

Downstream 100 bases:

>100_bases
CGGCAAAATACCTTGGAAAGGTTTGAGGGGAAGGGCGGAATCATTATCGATTTTTACCGCAAGTAATGAGTGGGCTTTAA
CTTTATGTTTATCCTGCTTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNTRSQAKQDGSEIRLIIGLSIASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTSFTMAFSLLLFAVLSDRVGRK
KPILVSLYLLVILDFCAFFITEFNQLILLRMLQGALLASVPAMAMAYFKDELGNNALLKAGAIYIAANSVGGIAGRLLGG
GMAQYLDWQQAMALLTLVSLIGTLVVTYLLPKSHFVKPEAELGRWPLKKADFNGFCHHLADPKLRLIYLIGGLAFMVMVN
QFSYIQLHLMDNPFKLGRFEVTLIFLCYLSGTYASYCSAKWLGRFGLNKVFICSVSALLAGTLLTLFDTLAAIFAGFLLS
AFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAMGGPYLLPFWLVWGWQGVVLGSVLGLMVLVFVVFKLVQPKS
ASSSLLMDL

Sequences:

>Translated_409_residues
MNTRSQAKQDGSEIRLIIGLSIASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTSFTMAFSLLLFAVLSDRVGRK
KPILVSLYLLVILDFCAFFITEFNQLILLRMLQGALLASVPAMAMAYFKDELGNNALLKAGAIYIAANSVGGIAGRLLGG
GMAQYLDWQQAMALLTLVSLIGTLVVTYLLPKSHFVKPEAELGRWPLKKADFNGFCHHLADPKLRLIYLIGGLAFMVMVN
QFSYIQLHLMDNPFKLGRFEVTLIFLCYLSGTYASYCSAKWLGRFGLNKVFICSVSALLAGTLLTLFDTLAAIFAGFLLS
AFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAMGGPYLLPFWLVWGWQGVVLGSVLGLMVLVFVVFKLVQPKS
ASSSLLMDL
>Mature_409_residues
MNTRSQAKQDGSEIRLIIGLSIASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTSFTMAFSLLLFAVLSDRVGRK
KPILVSLYLLVILDFCAFFITEFNQLILLRMLQGALLASVPAMAMAYFKDELGNNALLKAGAIYIAANSVGGIAGRLLGG
GMAQYLDWQQAMALLTLVSLIGTLVVTYLLPKSHFVKPEAELGRWPLKKADFNGFCHHLADPKLRLIYLIGGLAFMVMVN
QFSYIQLHLMDNPFKLGRFEVTLIFLCYLSGTYASYCSAKWLGRFGLNKVFICSVSALLAGTLLTLFDTLAAIFAGFLLS
AFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAMGGPYLLPFWLVWGWQGVVLGSVLGLMVLVFVVFKLVQPKS
ASSSLLMDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=376, Percent_Identity=32.7127659574468, Blast_Score=197, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44926; Mature: 44926

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRSQAKQDGSEIRLIIGLSIASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTS
CCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHH
FTMAFSLLLFAVLSDRVGRKKPILVSLYLLVILDFCAFFITEFNQLILLRMLQGALLASV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAMAMAYFKDELGNNALLKAGAIYIAANSVGGIAGRLLGGGMAQYLDWQQAMALLTLVSL
HHHHHHHHHHHHCCCCEEECCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IGTLVVTYLLPKSHFVKPEAELGRWPLKKADFNGFCHHLADPKLRLIYLIGGLAFMVMVN
HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFSYIQLHLMDNPFKLGRFEVTLIFLCYLSGTYASYCSAKWLGRFGLNKVFICSVSALLA
CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GTLLTLFDTLAAIFAGFLLSAFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGPYLLPFWLVWGWQGVVLGSVLGLMVLVFVVFKLVQPKSASSSLLMDL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MNTRSQAKQDGSEIRLIIGLSIASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTS
CCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHH
FTMAFSLLLFAVLSDRVGRKKPILVSLYLLVILDFCAFFITEFNQLILLRMLQGALLASV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAMAMAYFKDELGNNALLKAGAIYIAANSVGGIAGRLLGGGMAQYLDWQQAMALLTLVSL
HHHHHHHHHHHHCCCCEEECCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IGTLVVTYLLPKSHFVKPEAELGRWPLKKADFNGFCHHLADPKLRLIYLIGGLAFMVMVN
HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFSYIQLHLMDNPFKLGRFEVTLIFLCYLSGTYASYCSAKWLGRFGLNKVFICSVSALLA
CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GTLLTLFDTLAAIFAGFLLSAFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGPYLLPFWLVWGWQGVVLGSVLGLMVLVFVVFKLVQPKSASSSLLMDL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]