| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is phhA [H]
Identifier: 157961274
GI number: 157961274
Start: 1762393
End: 1763184
Strand: Direct
Name: phhA [H]
Synonym: Spea_1448
Alternate gene names: 157961274
Gene position: 1762393-1763184 (Clockwise)
Preceding gene: 157961269
Following gene: 157961275
Centisome position: 34.06
GC content: 45.33
Gene sequence:
>792_bases ATGAGTAAACCGCAAAACTATACAGCACGCTTGCCTGATGCAAATGGGTATATTGACTACCCTCAAGCTGAGCATGAAAT TTGGTCAGAACTTTATCAAAGACAGAAAATCAATCTACCTGGGCGCGCCTGTCAAGAATATCTCGATGGGCTAAATAAGC TTGGACTTGCGAGCGATAGAGTCCCGCAACTCTCTGAGGTTGACGATGTCTTACTACAAACAACGGGGTGGAAGACTGCC GCGGTTCCTGCGCTGATCTCATTTGCTAAGTTCTTTGAGCTTCTGGCTAATAAGTCATTTCCGGTGGCAACTTTTATTCG CAGCCGCGAAGAGCTTGATTACCTACAAGAGCCCGATATTTTTCATGAGGTATTTGGGCACTGTCCATTACTGACTAACC CATCTTTCGCTCACTTTTCTCACCTTTATGGTCAGTTAGGGCTTGCTGCGAGTAAAGAGCAGCGGGTCTTCTTAGCAAGG CTATACTGGTTTACTGTGGAGTTTGGCCTCCTAAAGTCTAAGAGCGATGAACTGAGGATTTACGGCGGAGGGATTTTAAG CTCTCCTGGTGAGACTCTGTATGTTATGGGCACTGAGCCTGATATTAGGCCATTTGATTTAATCGATGTGCTACGTACAC CTTACCGAATAGATATTATGCAGCCAATCTACTACGCCATTGAAGAGATTAGCGACCTAGGCGCAATAGCCGAGATGGAT ATTATGGCTGCAGTAAACAAGGCACAAGAATTAGGATTATTTATAGCGACATTCCCAGCTAAAGCGGGTTAG
Upstream 100 bases:
>100_bases TGCTTTAGTTAAGTATGAAGTAAGCACTCTTTTATCAGTTGTCGAGCATTTGTTTGAACTTTTGTTCTGCGTTACTGGTT AGAATCATGAGTAAATAACT
Downstream 100 bases:
>100_bases CTAAATCGGAGAGCGAAAGCCGGTTTAGTATTAAAAATAGAGTAACTAATAGCGTATTAGTAGCAATAATTAAGGAAGAG AGATGACTGAATTAGCGCAA
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSKPQNYTARLPDANGYIDYPQAEHEIWSELYQRQKINLPGRACQEYLDGLNKLGLASDRVPQLSEVDDVLLQTTGWKTA AVPALISFAKFFELLANKSFPVATFIRSREELDYLQEPDIFHEVFGHCPLLTNPSFAHFSHLYGQLGLAASKEQRVFLAR LYWFTVEFGLLKSKSDELRIYGGGILSSPGETLYVMGTEPDIRPFDLIDVLRTPYRIDIMQPIYYAIEEISDLGAIAEMD IMAAVNKAQELGLFIATFPAKAG
Sequences:
>Translated_263_residues MSKPQNYTARLPDANGYIDYPQAEHEIWSELYQRQKINLPGRACQEYLDGLNKLGLASDRVPQLSEVDDVLLQTTGWKTA AVPALISFAKFFELLANKSFPVATFIRSREELDYLQEPDIFHEVFGHCPLLTNPSFAHFSHLYGQLGLAASKEQRVFLAR LYWFTVEFGLLKSKSDELRIYGGGILSSPGETLYVMGTEPDIRPFDLIDVLRTPYRIDIMQPIYYAIEEISDLGAIAEMD IMAAVNKAQELGLFIATFPAKAG >Mature_262_residues SKPQNYTARLPDANGYIDYPQAEHEIWSELYQRQKINLPGRACQEYLDGLNKLGLASDRVPQLSEVDDVLLQTTGWKTAA VPALISFAKFFELLANKSFPVATFIRSREELDYLQEPDIFHEVFGHCPLLTNPSFAHFSHLYGQLGLAASKEQRVFLARL YWFTVEFGLLKSKSDELRIYGGGILSSPGETLYVMGTEPDIRPFDLIDVLRTPYRIDIMQPIYYAIEEISDLGAIAEMDI MAAVNKAQELGLFIATFPAKAG
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=219, Percent_Identity=37.4429223744292, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI88900505, Length=219, Percent_Identity=37.4429223744292, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI88900501, Length=219, Percent_Identity=37.4429223744292, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI4557819, Length=219, Percent_Identity=36.5296803652968, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI4759248, Length=219, Percent_Identity=34.703196347032, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI31795563, Length=219, Percent_Identity=33.7899543378995, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI71980736, Length=227, Percent_Identity=32.15859030837, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17531391, Length=218, Percent_Identity=36.697247706422, Blast_Score=131, Evalue=5e-31, Organism=Caenorhabditis elegans, GI115533973, Length=223, Percent_Identity=30.0448430493274, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI115532103, Length=223, Percent_Identity=30.0448430493274, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71980731, Length=158, Percent_Identity=31.0126582278481, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI17136774, Length=220, Percent_Identity=35.9090909090909, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136776, Length=220, Percent_Identity=35.9090909090909, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI24660393, Length=216, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI62472054, Length=216, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24654994, Length=187, Percent_Identity=37.9679144385027, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 29650; Mature: 29519
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPQNYTARLPDANGYIDYPQAEHEIWSELYQRQKINLPGRACQEYLDGLNKLGLASDR CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC VPQLSEVDDVLLQTTGWKTAAVPALISFAKFFELLANKSFPVATFIRSREELDYLQEPDI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH FHEVFGHCPLLTNPSFAHFSHLYGQLGLAASKEQRVFLARLYWFTVEFGLLKSKSDELRI HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE YGGGILSSPGETLYVMGTEPDIRPFDLIDVLRTPYRIDIMQPIYYAIEEISDLGAIAEMD EECCEECCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH IMAAVNKAQELGLFIATFPAKAG HHHHHHHHHHCCEEEEECCCCCC >Mature Secondary Structure SKPQNYTARLPDANGYIDYPQAEHEIWSELYQRQKINLPGRACQEYLDGLNKLGLASDR CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC VPQLSEVDDVLLQTTGWKTAAVPALISFAKFFELLANKSFPVATFIRSREELDYLQEPDI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH FHEVFGHCPLLTNPSFAHFSHLYGQLGLAASKEQRVFLARLYWFTVEFGLLKSKSDELRI HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE YGGGILSSPGETLYVMGTEPDIRPFDLIDVLRTPYRIDIMQPIYYAIEEISDLGAIAEMD EECCEECCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH IMAAVNKAQELGLFIATFPAKAG HHHHHHHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8108417; 10984043 [H]