| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961269
Identifier: 157961269
GI number: 157961269
Start: 1757890
End: 1758564
Strand: Direct
Name: 157961269
Synonym: Spea_1443
Alternate gene names: NA
Gene position: 1757890-1758564 (Clockwise)
Preceding gene: 157961268
Following gene: 157961274
Centisome position: 33.97
GC content: 44.89
Gene sequence:
>675_bases TTGATAAATGAAGCTGTTCTGATCCGCCCCATCATTAAACGCAATGGATTAACACTGACCTTTGCTGGTGGCCTAGGTTT AGCCACAGGATTAGGGCTCTTCTTATCGGGGAGTCATCTATTTGCACCAGGAATTATTTGTTTTGCATCTGGCGCAATCG CACTGGTTCTCGGGGGAGCTAAATTGGTTGAGCCTGAGGTGACGGTTAAACTGACTGACGAGGGGCTGACGTATTTTCAT CGCCGTGGTCAGGTTGTAATTGAATGGCAGAATATTCAACGTTTTGATCAGCCGCGAGTGTCTCAGGGGCTTGATACCCT GAATCTGCCTTATATTGGGATTAAGTTAAAACAGGTTAGCCCTGTTTTAGAGTGTATTTCACTGCGGTTAGCTGCGGGCT TATTAACTGAGCAGCGTCCTTTACTGATGACGGCTTCAGTTCAAGATGAAGACCTATCTGTATTAGAGGATCAGATGAGT GCAGAGTTTTCGCCTTTTATTGAAAACGATGACCGATATAAGGGCGTGCTAGCGATGTTTGGTCACCGTTGTCGGCTATT GAATTCACACTTAGGCTATCACCTGTTCATTTCAACAGATGCACTGGATAGGTCAGAAATTGAGTTTCTCGCTCTACTGA GAGAGTATAAAAAGCAAAGTGTAGAGCAGTTGTAG
Upstream 100 bases:
>100_bases CGCCCTAGAATCTAGGTCCTTGTTTATTCCGTCCTAGAACCTTCTTTGGTAAGCTGCTAGGCTCCGAGTTAGCATCCTAA TTATATAGAGTACGCAGACC
Downstream 100 bases:
>100_bases GCTAGTTGTTGAGCAGAATATTGGTTTTAAAGGCAAATATTCTGCTCTTCGGCTAGCTAGGATAAAGCTGCTAGCATTAA CCCCCTAGCAATAAACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MINEAVLIRPIIKRNGLTLTFAGGLGLATGLGLFLSGSHLFAPGIICFASGAIALVLGGAKLVEPEVTVKLTDEGLTYFH RRGQVVIEWQNIQRFDQPRVSQGLDTLNLPYIGIKLKQVSPVLECISLRLAAGLLTEQRPLLMTASVQDEDLSVLEDQMS AEFSPFIENDDRYKGVLAMFGHRCRLLNSHLGYHLFISTDALDRSEIEFLALLREYKKQSVEQL
Sequences:
>Translated_224_residues MINEAVLIRPIIKRNGLTLTFAGGLGLATGLGLFLSGSHLFAPGIICFASGAIALVLGGAKLVEPEVTVKLTDEGLTYFH RRGQVVIEWQNIQRFDQPRVSQGLDTLNLPYIGIKLKQVSPVLECISLRLAAGLLTEQRPLLMTASVQDEDLSVLEDQMS AEFSPFIENDDRYKGVLAMFGHRCRLLNSHLGYHLFISTDALDRSEIEFLALLREYKKQSVEQL >Mature_224_residues MINEAVLIRPIIKRNGLTLTFAGGLGLATGLGLFLSGSHLFAPGIICFASGAIALVLGGAKLVEPEVTVKLTDEGLTYFH RRGQVVIEWQNIQRFDQPRVSQGLDTLNLPYIGIKLKQVSPVLECISLRLAAGLLTEQRPLLMTASVQDEDLSVLEDQMS AEFSPFIENDDRYKGVLAMFGHRCRLLNSHLGYHLFISTDALDRSEIEFLALLREYKKQSVEQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24826; Mature: 24826
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINEAVLIRPIIKRNGLTLTFAGGLGLATGLGLFLSGSHLFAPGIICFASGAIALVLGGA CCCCCEEEEHHHHCCCEEEEEECCCHHHHHHHHHCCCCCHHHCHHHHHHCCCEEEEECCC KLVEPEVTVKLTDEGLTYFHRRGQVVIEWQNIQRFDQPRVSQGLDTLNLPYIGIKLKQVS EEECCEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEHHHHH PVLECISLRLAAGLLTEQRPLLMTASVQDEDLSVLEDQMSAEFSPFIENDDRYKGVLAMF HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH GHRCRLLNSHLGYHLFISTDALDRSEIEFLALLREYKKQSVEQL HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINEAVLIRPIIKRNGLTLTFAGGLGLATGLGLFLSGSHLFAPGIICFASGAIALVLGGA CCCCCEEEEHHHHCCCEEEEEECCCHHHHHHHHHCCCCCHHHCHHHHHHCCCEEEEECCC KLVEPEVTVKLTDEGLTYFHRRGQVVIEWQNIQRFDQPRVSQGLDTLNLPYIGIKLKQVS EEECCEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEHHHHH PVLECISLRLAAGLLTEQRPLLMTASVQDEDLSVLEDQMSAEFSPFIENDDRYKGVLAMF HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH GHRCRLLNSHLGYHLFISTDALDRSEIEFLALLREYKKQSVEQL HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA