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The map label for this gene is ycbC [H]

Identifier: 157961268

GI number: 157961268

Start: 1756797

End: 1757567

Strand: Direct

Name: ycbC [H]

Synonym: Spea_1442

Alternate gene names: 157961268

Gene position: 1756797-1757567 (Clockwise)

Preceding gene: 157961267

Following gene: 157961269

Centisome position: 33.95

GC content: 46.69

Gene sequence:

>771_bases
ATGTTTTGGTTAAAAAAGATAGTGTCGCAGTTTTTCATGCCAGTCCCTTTACTGCTGCTGCTTATTGCGCTTGCTTACTT
AGTTATTCGTAATCGTCAGTCCTCGAGAGCGATATTAGCGATAGCGGCCGCTTTACTGATCACTTTGAGCAGTAGTTGGG
GCAGTAATTGGTTACTCGCGCCATTGGAAGAGCAATATTCAGTTAACAATCAGCCTATAGCCAATAGCTGCTTGGTGATG
GTGCTTGGCAGTGGTCATGATGAAAACGCTAATTTTACTGCGGTGCAACAGCTCTCAAATACCGCTTTAGCCCGATTGAC
AGAGGGCGTGCGTCAATTGTCTCTAGGTCAAAATTGTAAACTCGTGGTGAGTGGTTGGAGCGGTGGGCTCTCAACTCGCT
CGCATGCCGATGTGATGTTTGATGCTGCCGTGGAGTTAGGCGTATCGCCTAAGGCCATTATTAAGCTCCCATTGGCGCAA
GATACCATAGAAGAAGCACAATTTATGAAGTGGGAGGTCGAAGATGCGCCTTTTCGCTTAGTCACATCAGCAAGCCATAT
GCCGCGTGCAATGGCCATTTTTACCAATGCCAAGCTTAATGTGGTTGCAGCTCCTACCGATTTTGCTCAACGAGCTAGTT
ATTGGTGGCGTTTCGATGCCCAGAGCCTGTTATCGTCGCAAAGGGCAATTCATGAATACCTTGGTTTACTCTGGTTTAAG
CTTAAATATGAGAAAGAAGGTGCTAGGAGCTCAGAAGGTTCTAGGACCTAG

Upstream 100 bases:

>100_bases
CTACTGAGGCTATCTATTTATGGTGTAGGCACGAATAACATTAATAAATAGAATGACATGCTACACTTTGTGAATATTTT
CATCTGACTTTGGCTGCTTT

Downstream 100 bases:

>100_bases
GAAAAGTAGGTTCTAGGTTTTAGGAAAGCAGGTCCTAGGTACAAGCTGAGACGGAACGGCCTACGGCCTTACGGAACGTT
CGCTGGCTCACTCACTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFWLKKIVSQFFMPVPLLLLLIALAYLVIRNRQSSRAILAIAAALLITLSSSWGSNWLLAPLEEQYSVNNQPIANSCLVM
VLGSGHDENANFTAVQQLSNTALARLTEGVRQLSLGQNCKLVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQ
DTIEEAQFMKWEVEDAPFRLVTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWRFDAQSLLSSQRAIHEYLGLLWFK
LKYEKEGARSSEGSRT

Sequences:

>Translated_256_residues
MFWLKKIVSQFFMPVPLLLLLIALAYLVIRNRQSSRAILAIAAALLITLSSSWGSNWLLAPLEEQYSVNNQPIANSCLVM
VLGSGHDENANFTAVQQLSNTALARLTEGVRQLSLGQNCKLVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQ
DTIEEAQFMKWEVEDAPFRLVTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWRFDAQSLLSSQRAIHEYLGLLWFK
LKYEKEGARSSEGSRT
>Mature_256_residues
MFWLKKIVSQFFMPVPLLLLLIALAYLVIRNRQSSRAILAIAAALLITLSSSWGSNWLLAPLEEQYSVNNQPIANSCLVM
VLGSGHDENANFTAVQQLSNTALARLTEGVRQLSLGQNCKLVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQ
DTIEEAQFMKWEVEDAPFRLVTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWRFDAQSLLSSQRAIHEYLGLLWFK
LKYEKEGARSSEGSRT

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=192, Percent_Identity=37.5, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28374; Mature: 28374

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWLKKIVSQFFMPVPLLLLLIALAYLVIRNRQSSRAILAIAAALLITLSSSWGSNWLLA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
PLEEQYSVNNQPIANSCLVMVLGSGHDENANFTAVQQLSNTALARLTEGVRQLSLGQNCK
CCHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQDTIEEAQFMKWEVEDAPFRL
EEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHEEECCCCCEEE
VTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWRFDAQSLLSSQRAIHEYLGLLWFK
EECCCCCCCEEEEEECCEEEEEECCCHHHHHCHHEEEECHHHHHHHHHHHHHHHHHHHHH
LKYEKEGARSSEGSRT
EEECCCCCCCCCCCCC
>Mature Secondary Structure
MFWLKKIVSQFFMPVPLLLLLIALAYLVIRNRQSSRAILAIAAALLITLSSSWGSNWLLA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
PLEEQYSVNNQPIANSCLVMVLGSGHDENANFTAVQQLSNTALARLTEGVRQLSLGQNCK
CCHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQDTIEEAQFMKWEVEDAPFRL
EEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHEEECCCCCEEE
VTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWRFDAQSLLSSQRAIHEYLGLLWFK
EECCCCCCCEEEEEECCEEEEEECCCHHHHHCHHEEEECHHHHHHHHHHHHHHHHHHHHH
LKYEKEGARSSEGSRT
EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]