| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is bglX [H]
Identifier: 157961265
GI number: 157961265
Start: 1752143
End: 1754695
Strand: Direct
Name: bglX [H]
Synonym: Spea_1439
Alternate gene names: 157961265
Gene position: 1752143-1754695 (Clockwise)
Preceding gene: 157961263
Following gene: 157961266
Centisome position: 33.86
GC content: 47.4
Gene sequence:
>2553_bases ATGTCTAACAGTGATAATAGCGTTTCTATATGGCCGCTTACACCTTCTGTTAAGCTGATTGCGATTGTTATTTTGTTTGT AGCAGCTGCGTATTGGATAGCAGGAGTGGGATCTAAGGAGCGTAGAGATGCGTCAAAGATCTGGCCTGTTTTAGAGCTGG AGGTGAAGCAAGACGCTGGGATTGAACGCAAAATTTCGCAGCTATTGGCAGACATGACATTGGAGCAGAAAATTGCGCAG ATGATCCAACCTGAGATCGGTGATATTAGCGTTGAAGACATGAGGCGGTATGGCTTTGGCTCCTATCTTAATGGTGGAGG CTCTTTTCCAAACGGCAACAAGCATGCAACGCCGAGCGATTGGATTGCACTAGCAGAAGCCATGTATCAAGCGTCAGTAG ATGATTCTATAGATGGCTCGACCATTCCAACAATGTGGGGCACGGATGCTGTGCACGGTCATAACAATGTGATTGGCGCG ACGCTGTTTCCCCATAACATAGGGTTAGGGGCGGCAAATAACCCCGAACTTATTGAAAAAATTGCAACCATAACGGCTAA AGAAGTGATGGTTACCGGTATTGATTGGGTATTTGCGCCAACGGTTGCTGTGGTGCGAGACGATCGCTGGGGCAGAACGT ATGAGGGCTATTCAGAAGATCCGCAGATAGTTAAGGCTTACGCTGGCGCAATCGTTAGAGGGTTACAGGGGCGTGCGAAT GCCGATTTTCTTGGTGACGAGCGGGTTATCGCAACCGTTAAACATTTCTTAGGGGACGGAGGCACGACTGATGGTGTTGA TCAGGGAGATAATACCTTTGCAGAGCAGCAACTCTTCGACATTCATGCCCAAGGCTATGTGGGAGGAATATCGGTAGGGG CGCAAACGGTAATGGCGTCATTCAACAGTTGGAATGGCGTTAAGAATCACGGTAATCGCTATCTGCTGACATCAGTTTTA AAAGATCAAATGGGGTTCGACGGGCTTGTGGTGGGTGATTGGAACGGTCATGGCCAGATTTATGATTGTAGTAATGAGAG CTGTCCCCAGGCAGTCAATGCGGGCCTGGATGTATATATGGTACCGACAAAGGCTTGGAAACCTCTTTTTGATAATACCC TTGCACAAGTAAATAGTGGTGTCATCCCCATTGAGCGTATCGATGATGCGGTAACGCGGGTTTTACGTGTAAAAATGCGT GCCGGCTTATTCGATAAACCGAGTCCAGCTAAACGCGCATTATCGGGTAACACGGCATTAATTGGTGCTAAGGCGCATCG TGATGTGGCAAGGCAAGCGGTAAGGGAGTCACTAGTGCTGCTTAAGAATGAAGGGGGAGTATTACCTTTGTCGCCCACGC AGACTGTGATGGTGGCTGGTGATGGCGCAGATAACATAGGTAAACAATCTGGTGGTTGGTCAATAACTTGGCAAGGCACT TATAATACCAATGCCGATTTTCCCGGTGGCAGTTCTATCTATAGCGGTATTCAAGCACATGTGACTCAGGCTGGTGGTAA GGCATTACTAAGCCCTAATGGTGATTATGCGGTAAAGCCTGATGTGGCGATTGTGGTGTTTGGAGAGAACCCATACGCAG AGGGTCATGGCGATCTCGATAATCTTGAGTATCAGCGAGGCAATAAACATGATCTTGCCTTGCTACAAAAGTTAAAGGCA CAAGGGATCCCTGTGGTCGCGGTGTTTATCAGTGGCCGACCTATGTGGGTGAATGCAGAGATTAATGCCGCAGACGCCTT TGTGGCTGCTTGGTTGCCCGGTAGTGAGGGCGAGGGGGTTGCAGAGGTTCTGTTTAGGGATGCGAGTGAAGGCGTTCAAT TCGATTTCAGCGGTAAGCTATCTTTTTCATGGCCTAGTAGTCCTACGCAAACAGCTATTAACCGATTCGATAATGATACC CCTCTATTTCCCTACGGATACGGATTAACCTATGCCGACAGTGCGAGGTCAATGGTGCTTAATGAGAAGGCCGATTTTGT GACGGTTCAGAATCAATACATGGCGATTTTTGATCGGGCAGTACAAGCGCCATGGGTGATGATGATAGGCAGTAAGAATG AACAGTTATCAGTAGATGGCAGTGAAACTCAAGCTGAGGTCGTATATTTGCGAAGCATAGACAAAAATGTACAAGAAGAT GCGCGCTTATTTAAGTTTAATGGGCAAGGGGAGGGGGTTGTTCGTTTTAGAAGTAATTTCCCTCGTGATTTAAGGGCATT TATAGAGCGTCCATCGATGTTATCGTTTGCGGTGAACATTGAGCAGTTAGGTGAGCAGGCTGTTAATTTGAGCATGGGTT GTGAAGCGGACTGCGGTGAACCTATCGATATCTCAACGCTGCTTGCCAAGCAGCCGATTGGACAGTGGCAAACGGTGACA GTGCCGCTAAACTGTTTTGCCAAATCAGGGGTTAATTTTGCGAAAGTAAACTCCCCATTCTCACTGAGCAGCGCAAGTAA AATGAGTCTCAGTTTAGCTGATATTGAGTTTGCTCCTATTACGGATGAAAAGCCTTCAATGTCTTGCCTTTAG
Upstream 100 bases:
>100_bases AAGGGGAGACCAAATAGAGTTGGTTTCTAACATGGAATTAGCGTGATGAAACCGGAGTGATGACTTAAGTTTTCATATCG CCTTTACAGGGAGTTTATCT
Downstream 100 bases:
>100_bases CAGTTTTAGGTAGATATTTAATGATCAAACTTGCTTAGTCTGTTTTCGACATTAAATGATTATTTGGTTATTAATTTTTA TCGTTAAATACTGGCATAAT
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 850; Mature: 849
Protein sequence:
>850_residues MSNSDNSVSIWPLTPSVKLIAIVILFVAAAYWIAGVGSKERRDASKIWPVLELEVKQDAGIERKISQLLADMTLEQKIAQ MIQPEIGDISVEDMRRYGFGSYLNGGGSFPNGNKHATPSDWIALAEAMYQASVDDSIDGSTIPTMWGTDAVHGHNNVIGA TLFPHNIGLGAANNPELIEKIATITAKEVMVTGIDWVFAPTVAVVRDDRWGRTYEGYSEDPQIVKAYAGAIVRGLQGRAN ADFLGDERVIATVKHFLGDGGTTDGVDQGDNTFAEQQLFDIHAQGYVGGISVGAQTVMASFNSWNGVKNHGNRYLLTSVL KDQMGFDGLVVGDWNGHGQIYDCSNESCPQAVNAGLDVYMVPTKAWKPLFDNTLAQVNSGVIPIERIDDAVTRVLRVKMR AGLFDKPSPAKRALSGNTALIGAKAHRDVARQAVRESLVLLKNEGGVLPLSPTQTVMVAGDGADNIGKQSGGWSITWQGT YNTNADFPGGSSIYSGIQAHVTQAGGKALLSPNGDYAVKPDVAIVVFGENPYAEGHGDLDNLEYQRGNKHDLALLQKLKA QGIPVVAVFISGRPMWVNAEINAADAFVAAWLPGSEGEGVAEVLFRDASEGVQFDFSGKLSFSWPSSPTQTAINRFDNDT PLFPYGYGLTYADSARSMVLNEKADFVTVQNQYMAIFDRAVQAPWVMMIGSKNEQLSVDGSETQAEVVYLRSIDKNVQED ARLFKFNGQGEGVVRFRSNFPRDLRAFIERPSMLSFAVNIEQLGEQAVNLSMGCEADCGEPIDISTLLAKQPIGQWQTVT VPLNCFAKSGVNFAKVNSPFSLSSASKMSLSLADIEFAPITDEKPSMSCL
Sequences:
>Translated_850_residues MSNSDNSVSIWPLTPSVKLIAIVILFVAAAYWIAGVGSKERRDASKIWPVLELEVKQDAGIERKISQLLADMTLEQKIAQ MIQPEIGDISVEDMRRYGFGSYLNGGGSFPNGNKHATPSDWIALAEAMYQASVDDSIDGSTIPTMWGTDAVHGHNNVIGA TLFPHNIGLGAANNPELIEKIATITAKEVMVTGIDWVFAPTVAVVRDDRWGRTYEGYSEDPQIVKAYAGAIVRGLQGRAN ADFLGDERVIATVKHFLGDGGTTDGVDQGDNTFAEQQLFDIHAQGYVGGISVGAQTVMASFNSWNGVKNHGNRYLLTSVL KDQMGFDGLVVGDWNGHGQIYDCSNESCPQAVNAGLDVYMVPTKAWKPLFDNTLAQVNSGVIPIERIDDAVTRVLRVKMR AGLFDKPSPAKRALSGNTALIGAKAHRDVARQAVRESLVLLKNEGGVLPLSPTQTVMVAGDGADNIGKQSGGWSITWQGT YNTNADFPGGSSIYSGIQAHVTQAGGKALLSPNGDYAVKPDVAIVVFGENPYAEGHGDLDNLEYQRGNKHDLALLQKLKA QGIPVVAVFISGRPMWVNAEINAADAFVAAWLPGSEGEGVAEVLFRDASEGVQFDFSGKLSFSWPSSPTQTAINRFDNDT PLFPYGYGLTYADSARSMVLNEKADFVTVQNQYMAIFDRAVQAPWVMMIGSKNEQLSVDGSETQAEVVYLRSIDKNVQED ARLFKFNGQGEGVVRFRSNFPRDLRAFIERPSMLSFAVNIEQLGEQAVNLSMGCEADCGEPIDISTLLAKQPIGQWQTVT VPLNCFAKSGVNFAKVNSPFSLSSASKMSLSLADIEFAPITDEKPSMSCL >Mature_849_residues SNSDNSVSIWPLTPSVKLIAIVILFVAAAYWIAGVGSKERRDASKIWPVLELEVKQDAGIERKISQLLADMTLEQKIAQM IQPEIGDISVEDMRRYGFGSYLNGGGSFPNGNKHATPSDWIALAEAMYQASVDDSIDGSTIPTMWGTDAVHGHNNVIGAT LFPHNIGLGAANNPELIEKIATITAKEVMVTGIDWVFAPTVAVVRDDRWGRTYEGYSEDPQIVKAYAGAIVRGLQGRANA DFLGDERVIATVKHFLGDGGTTDGVDQGDNTFAEQQLFDIHAQGYVGGISVGAQTVMASFNSWNGVKNHGNRYLLTSVLK DQMGFDGLVVGDWNGHGQIYDCSNESCPQAVNAGLDVYMVPTKAWKPLFDNTLAQVNSGVIPIERIDDAVTRVLRVKMRA GLFDKPSPAKRALSGNTALIGAKAHRDVARQAVRESLVLLKNEGGVLPLSPTQTVMVAGDGADNIGKQSGGWSITWQGTY NTNADFPGGSSIYSGIQAHVTQAGGKALLSPNGDYAVKPDVAIVVFGENPYAEGHGDLDNLEYQRGNKHDLALLQKLKAQ GIPVVAVFISGRPMWVNAEINAADAFVAAWLPGSEGEGVAEVLFRDASEGVQFDFSGKLSFSWPSSPTQTAINRFDNDTP LFPYGYGLTYADSARSMVLNEKADFVTVQNQYMAIFDRAVQAPWVMMIGSKNEQLSVDGSETQAEVVYLRSIDKNVQEDA RLFKFNGQGEGVVRFRSNFPRDLRAFIERPSMLSFAVNIEQLGEQAVNLSMGCEADCGEPIDISTLLAKQPIGQWQTVTV PLNCFAKSGVNFAKVNSPFSLSSASKMSLSLADIEFAPITDEKPSMSCL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=654, Percent_Identity=27.9816513761468, Blast_Score=211, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 91837; Mature: 91706
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSDNSVSIWPLTPSVKLIAIVILFVAAAYWIAGVGSKERRDASKIWPVLELEVKQDAG CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCEEEEEECCCCC IERKISQLLADMTLEQKIAQMIQPEIGDISVEDMRRYGFGSYLNGGGSFPNGNKHATPSD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH WIALAEAMYQASVDDSIDGSTIPTMWGTDAVHGHNNVIGATLFPHNIGLGAANNPELIEK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHH IATITAKEVMVTGIDWVFAPTVAVVRDDRWGRTYEGYSEDPQIVKAYAGAIVRGLQGRAN HHHHHHHHHEEECCCCHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC ADFLGDERVIATVKHFLGDGGTTDGVDQGDNTFAEQQLFDIHAQGYVGGISVGAQTVMAS CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH FNSWNGVKNHGNRYLLTSVLKDQMGFDGLVVGDWNGHGQIYDCSNESCPQAVNAGLDVYM HHCCCCCHHCCCEEEHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCHHHHCCCEEEE VPTKAWKPLFDNTLAQVNSGVIPIERIDDAVTRVLRVKMRAGLFDKPSPAKRALSGNTAL ECCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEE IGAKAHRDVARQAVRESLVLLKNEGGVLPLSPTQTVMVAGDGADNIGKQSGGWSITWQGT EECHHHHHHHHHHHHHHEEEEECCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEE YNTNADFPGGSSIYSGIQAHVTQAGGKALLSPNGDYAVKPDVAIVVFGENPYAEGHGDLD CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCC NLEYQRGNKHDLALLQKLKAQGIPVVAVFISGRPMWVNAEINAADAFVAAWLPGSEGEGV CCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCH AEVLFRDASEGVQFDFSGKLSFSWPSSPTQTAINRFDNDTPLFPYGYGLTYADSARSMVL HHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHEE NEKADFVTVQNQYMAIFDRAVQAPWVMMIGSKNEQLSVDGSETQAEVVYLRSIDKNVQED CCCCCEEEECHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEEEEEHHCCCHHCC ARLFKFNGQGEGVVRFRSNFPRDLRAFIERPSMLSFAVNIEQLGEQAVNLSMGCEADCGE CEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCC PIDISTLLAKQPIGQWQTVTVPLNCFAKSGVNFAKVNSPFSLSSASKMSLSLADIEFAPI CCCHHHHHHHCCCCCCEEEEEEHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEEECC TDEKPSMSCL CCCCCCCCCC >Mature Secondary Structure SNSDNSVSIWPLTPSVKLIAIVILFVAAAYWIAGVGSKERRDASKIWPVLELEVKQDAG CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCEEEEEECCCCC IERKISQLLADMTLEQKIAQMIQPEIGDISVEDMRRYGFGSYLNGGGSFPNGNKHATPSD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH WIALAEAMYQASVDDSIDGSTIPTMWGTDAVHGHNNVIGATLFPHNIGLGAANNPELIEK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHH IATITAKEVMVTGIDWVFAPTVAVVRDDRWGRTYEGYSEDPQIVKAYAGAIVRGLQGRAN HHHHHHHHHEEECCCCHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC ADFLGDERVIATVKHFLGDGGTTDGVDQGDNTFAEQQLFDIHAQGYVGGISVGAQTVMAS CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH FNSWNGVKNHGNRYLLTSVLKDQMGFDGLVVGDWNGHGQIYDCSNESCPQAVNAGLDVYM HHCCCCCHHCCCEEEHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCHHHHCCCEEEE VPTKAWKPLFDNTLAQVNSGVIPIERIDDAVTRVLRVKMRAGLFDKPSPAKRALSGNTAL ECCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEE IGAKAHRDVARQAVRESLVLLKNEGGVLPLSPTQTVMVAGDGADNIGKQSGGWSITWQGT EECHHHHHHHHHHHHHHEEEEECCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEE YNTNADFPGGSSIYSGIQAHVTQAGGKALLSPNGDYAVKPDVAIVVFGENPYAEGHGDLD CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCC NLEYQRGNKHDLALLQKLKAQGIPVVAVFISGRPMWVNAEINAADAFVAAWLPGSEGEGV CCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCH AEVLFRDASEGVQFDFSGKLSFSWPSSPTQTAINRFDNDTPLFPYGYGLTYADSARSMVL HHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHEE NEKADFVTVQNQYMAIFDRAVQAPWVMMIGSKNEQLSVDGSETQAEVVYLRSIDKNVQED CCCCCEEEECHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEEEEEHHCCCHHCC ARLFKFNGQGEGVVRFRSNFPRDLRAFIERPSMLSFAVNIEQLGEQAVNLSMGCEADCGE CEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCC PIDISTLLAKQPIGQWQTVTVPLNCFAKSGVNFAKVNSPFSLSSASKMSLSLADIEFAPI CCCHHHHHHHCCCCCCEEEEEEHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEEECC TDEKPSMSCL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]