| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is cysQ [H]
Identifier: 157961266
GI number: 157961266
Start: 1754834
End: 1755622
Strand: Direct
Name: cysQ [H]
Synonym: Spea_1440
Alternate gene names: 157961266
Gene position: 1754834-1755622 (Clockwise)
Preceding gene: 157961265
Following gene: 157961267
Centisome position: 33.91
GC content: 46.26
Gene sequence:
>789_bases TTGAACCATGTATTTAAACAGGAGTGGTTAGGACCTCTTCTCGATATTGCGACTGAAGCTGGAGAGGCCATTATGGCCAT ATATAAGCAGGATGATCTAGGTGTGTTGACTAAGTCTGATGACAGTCCTGTAACGGCAGCTGATTTGGCGAGCCATCAGG TAATTGTTGAAAGGCTGAAGCAATTAACCCCTGATATCCCTGTCATGTCGGAAGAGTCGACGGATATTGATTGGCAGCAG AGGCGTCATTGGCAATCATATTGGCTGATTGACCCACTCGATGGCACCAAAGAGTTTATTAAGCGCAATGGCGAGTTCAC AGTCAATATCGCCTTCATCCACCATGATACCGCCGTCGCAGGCGTTGTATATGCCCCTGTTCTGGATAAATGCTTTTATG GTGAACTGGAAAGTGGAGCTTGGTTAAAACATGCTGGAGAACGAATCGAGTTACCTAAAGTGAATAGCTCGAAAGCGCTT GTTCCTCGAATTGTTGGTAGTCGATCTCACGCTAGCCCTGGTTTACAAGCATTCTTGCAAGAGCTTGGCGAGCATGAGAT GAAGAGTGTTGGTAGTTCGCTTAAGTTTTGTCTTTTGGCTGAAGGAGAGGCCGATATTTACCCAAGGTTGGGGCTAACCA GTGAGTGGGATACCGCAGCTGCGCAGGCTGTGCTGGAAAGTGCTGGTGGTCGAGTGGTGCAATATGACACTAATATTCCT CTTAATTACAATCAAAAATCTGACATACTGAATCCCTATTTTATTGCGTATGCGCCACACTGGCATTGA
Upstream 100 bases:
>100_bases TCTGTTTTCGACATTAAATGATTATTTGGTTATTAATTTTTATCGTTAAATACTGGCATAATGAAGCTATAACCTTCGTA AATTATAGAGATAACTTACA
Downstream 100 bases:
>100_bases AGCAAGTTGACTTTAGCTGTGTTGGTGAGAGTAGGCGAGTCTGAGTAAAAGGCTACTCTCGGTTTAAATGTTAAAACGAA TTAAAAATACTTTTGGAGCG
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNHVFKQEWLGPLLDIATEAGEAIMAIYKQDDLGVLTKSDDSPVTAADLASHQVIVERLKQLTPDIPVMSEESTDIDWQQ RRHWQSYWLIDPLDGTKEFIKRNGEFTVNIAFIHHDTAVAGVVYAPVLDKCFYGELESGAWLKHAGERIELPKVNSSKAL VPRIVGSRSHASPGLQAFLQELGEHEMKSVGSSLKFCLLAEGEADIYPRLGLTSEWDTAAAQAVLESAGGRVVQYDTNIP LNYNQKSDILNPYFIAYAPHWH
Sequences:
>Translated_262_residues MNHVFKQEWLGPLLDIATEAGEAIMAIYKQDDLGVLTKSDDSPVTAADLASHQVIVERLKQLTPDIPVMSEESTDIDWQQ RRHWQSYWLIDPLDGTKEFIKRNGEFTVNIAFIHHDTAVAGVVYAPVLDKCFYGELESGAWLKHAGERIELPKVNSSKAL VPRIVGSRSHASPGLQAFLQELGEHEMKSVGSSLKFCLLAEGEADIYPRLGLTSEWDTAAAQAVLESAGGRVVQYDTNIP LNYNQKSDILNPYFIAYAPHWH >Mature_262_residues MNHVFKQEWLGPLLDIATEAGEAIMAIYKQDDLGVLTKSDDSPVTAADLASHQVIVERLKQLTPDIPVMSEESTDIDWQQ RRHWQSYWLIDPLDGTKEFIKRNGEFTVNIAFIHHDTAVAGVVYAPVLDKCFYGELESGAWLKHAGERIELPKVNSSKAL VPRIVGSRSHASPGLQAFLQELGEHEMKSVGSSLKFCLLAEGEADIYPRLGLTSEWDTAAAQAVLESAGGRVVQYDTNIP LNYNQKSDILNPYFIAYAPHWH
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=235, Percent_Identity=28.5106382978723, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI221625487, Length=235, Percent_Identity=28.5106382978723, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI7657236, Length=236, Percent_Identity=28.8135593220339, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1790659, Length=246, Percent_Identity=51.219512195122, Blast_Score=228, Evalue=3e-61, Organism=Escherichia coli, GI1788882, Length=238, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71995897, Length=269, Percent_Identity=25.2788104089219, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71995905, Length=269, Percent_Identity=25.2788104089219, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193202572, Length=254, Percent_Identity=24.8031496062992, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320493, Length=214, Percent_Identity=27.1028037383178, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24651149, Length=248, Percent_Identity=27.8225806451613, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24664922, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357303, Length=154, Percent_Identity=29.8701298701299, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29228; Mature: 29228
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHVFKQEWLGPLLDIATEAGEAIMAIYKQDDLGVLTKSDDSPVTAADLASHQVIVERLK CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHH QLTPDIPVMSEESTDIDWQQRRHWQSYWLIDPLDGTKEFIKRNGEFTVNIAFIHHDTAVA HHCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHCCCCEEEEEEEEECCCHHH GVVYAPVLDKCFYGELESGAWLKHAGERIELPKVNSSKALVPRIVGSRSHASPGLQAFLQ HHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHH ELGEHEMKSVGSSLKFCLLAEGEADIYPRLGLTSEWDTAAAQAVLESAGGRVVQYDTNIP HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC LNYNQKSDILNPYFIAYAPHWH CCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MNHVFKQEWLGPLLDIATEAGEAIMAIYKQDDLGVLTKSDDSPVTAADLASHQVIVERLK CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHH QLTPDIPVMSEESTDIDWQQRRHWQSYWLIDPLDGTKEFIKRNGEFTVNIAFIHHDTAVA HHCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHCCCCEEEEEEEEECCCHHH GVVYAPVLDKCFYGELESGAWLKHAGERIELPKVNSSKALVPRIVGSRSHASPGLQAFLQ HHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHH ELGEHEMKSVGSSLKFCLLAEGEADIYPRLGLTSEWDTAAAQAVLESAGGRVVQYDTNIP HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC LNYNQKSDILNPYFIAYAPHWH CCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]