| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961254
Identifier: 157961254
GI number: 157961254
Start: 1736406
End: 1737812
Strand: Reverse
Name: 157961254
Synonym: Spea_1428
Alternate gene names: NA
Gene position: 1737812-1736406 (Counterclockwise)
Preceding gene: 157961255
Following gene: 157961253
Centisome position: 33.58
GC content: 47.62
Gene sequence:
>1407_bases ATGACTAAACACTCCTACAGACCTCTTCTATGGCTAAAGCACTACATTGTAAATGGCAGTCAGCTATCAGCAAAAAAGAG AAAGCATGCCTATCTGGTTGTCACATCGCTGCTATTACTGCTGATCTGGTTTCTGGTCTTGTTATTTACAACCTTAAGTC CAGACCGCTACCTCAGTAATTGGACTCTAATACTTCCAGGAGCTGGGGCTGGAGCCTTAGTCAGTCTAGACAGTGTGGGG CAAGCCAATAGCTCAACCACCTCCCCCTACGCCAGTAGCGCAATCGATCCAAGAGTTAACTACAAGTCAATTTCAATGAG CAAGACCCTTATCAATGCCGCCGCTAAGACACTACACCTAAAGGCAAGCGAGTTTGGCACGCCAAAGTTGAAGATGCCTA ATCAAACGGGACTGATGCAGTTTAGTATCAAGGCAACAACAGCCAAGGCTGCACAGCAAAAAGCGTGGGCCCATTATCAC AGCTTACAAGCATTACTGGCACAGTTACGTCGTGATGAAATTGAGCAACGTGAAGATGCTATTCGCGTTGGCATGGCTAC TTTTGCTAATAAAGTCAGTTTAACCCAACAGAAATTACTCGAATTTCAATCGATACACGGCCTTGTGTCACTCGATCAGT TTAAAGAGCTCGCCTTGACCATGGAGAGACTGAGACATAACAAGGTCAATTTAGTCTCTGAGCTACAAGGTGTGAAAGCC AGCCAAAAGATGCTCGAGATCCATTTAAGCCTAACGCCAAAACAGGCAGCGGGATTGTTGACGCTCAAAAATGATCAGCT ATTCCAGCAACTGCTGATCAGCTATACCAATGTAACAGCCACCTTAGCCGAATACCGCAGTCGTTTTGGCAAGCGCCACC CCAAAGTGGTCACCCTGCAAGATGAGCAAAAATCGGTACTCAATGCACTGAGCCGCCGCTGCAAGGTACTGCTCGGTTAT AACAATAAACGTCTGATGTTGATGTTATCGGCAGATGACTTAGATGGTCGCGCTCAACTCATGCAGGAATTACTGTCACT CAACACCAAAGCCGAGGGGCTTAGGCATCGAATTGATGCCCTGTCCGAGCAGATCCACGATTGGGATCATAGGTTCAATG ACAGCAATGACGATGCAGCTAAACTCGAAGGCCTGCAGCGAGAGCATCAAGTCGCGACTGCGGTATTTACTTCCGCACTG GCAAAAATGGACATAGGAAAGGCCGACATCTATGCAGCCTATCCGCTGCTACAGCTAATGGCTGCGCCTACATTGCCGGA AGAGTCCGACAATCTACGCACCCTGCTAGCCATTGTCGGCGGTATTGCCGCTTCAATTTCACTGGTTGCAGGAATGGGAA TGCTATGGATCCGCAAACCTATACTCCAGAAAATTCTGACGAGTTAA
Upstream 100 bases:
>100_bases CACCAATATCCGAGAAATCGCACGCACCATTACTGAGGTGCTTGTTCCAGCGACTCTTCTTGAGTTGCTGTAAAACAAAA ATGCTTATAGGAGGCCGACA
Downstream 100 bases:
>100_bases TCATCTGGCGCGCTATCACTGGTACCTATCTGTTTTGGCTTTTAGGCGCCATGTATTTAGTCGCCCCCGTCATCGCATGG ATATTACTCCTGCGGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTKHSYRPLLWLKHYIVNGSQLSAKKRKHAYLVVTSLLLLLIWFLVLLFTTLSPDRYLSNWTLILPGAGAGALVSLDSVG QANSSTTSPYASSAIDPRVNYKSISMSKTLINAAAKTLHLKASEFGTPKLKMPNQTGLMQFSIKATTAKAAQQKAWAHYH SLQALLAQLRRDEIEQREDAIRVGMATFANKVSLTQQKLLEFQSIHGLVSLDQFKELALTMERLRHNKVNLVSELQGVKA SQKMLEIHLSLTPKQAAGLLTLKNDQLFQQLLISYTNVTATLAEYRSRFGKRHPKVVTLQDEQKSVLNALSRRCKVLLGY NNKRLMLMLSADDLDGRAQLMQELLSLNTKAEGLRHRIDALSEQIHDWDHRFNDSNDDAAKLEGLQREHQVATAVFTSAL AKMDIGKADIYAAYPLLQLMAAPTLPEESDNLRTLLAIVGGIAASISLVAGMGMLWIRKPILQKILTS
Sequences:
>Translated_468_residues MTKHSYRPLLWLKHYIVNGSQLSAKKRKHAYLVVTSLLLLLIWFLVLLFTTLSPDRYLSNWTLILPGAGAGALVSLDSVG QANSSTTSPYASSAIDPRVNYKSISMSKTLINAAAKTLHLKASEFGTPKLKMPNQTGLMQFSIKATTAKAAQQKAWAHYH SLQALLAQLRRDEIEQREDAIRVGMATFANKVSLTQQKLLEFQSIHGLVSLDQFKELALTMERLRHNKVNLVSELQGVKA SQKMLEIHLSLTPKQAAGLLTLKNDQLFQQLLISYTNVTATLAEYRSRFGKRHPKVVTLQDEQKSVLNALSRRCKVLLGY NNKRLMLMLSADDLDGRAQLMQELLSLNTKAEGLRHRIDALSEQIHDWDHRFNDSNDDAAKLEGLQREHQVATAVFTSAL AKMDIGKADIYAAYPLLQLMAAPTLPEESDNLRTLLAIVGGIAASISLVAGMGMLWIRKPILQKILTS >Mature_467_residues TKHSYRPLLWLKHYIVNGSQLSAKKRKHAYLVVTSLLLLLIWFLVLLFTTLSPDRYLSNWTLILPGAGAGALVSLDSVGQ ANSSTTSPYASSAIDPRVNYKSISMSKTLINAAAKTLHLKASEFGTPKLKMPNQTGLMQFSIKATTAKAAQQKAWAHYHS LQALLAQLRRDEIEQREDAIRVGMATFANKVSLTQQKLLEFQSIHGLVSLDQFKELALTMERLRHNKVNLVSELQGVKAS QKMLEIHLSLTPKQAAGLLTLKNDQLFQQLLISYTNVTATLAEYRSRFGKRHPKVVTLQDEQKSVLNALSRRCKVLLGYN NKRLMLMLSADDLDGRAQLMQELLSLNTKAEGLRHRIDALSEQIHDWDHRFNDSNDDAAKLEGLQREHQVATAVFTSALA KMDIGKADIYAAYPLLQLMAAPTLPEESDNLRTLLAIVGGIAASISLVAGMGMLWIRKPILQKILTS
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52129; Mature: 51998
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHSYRPLLWLKHYIVNGSQLSAKKRKHAYLVVTSLLLLLIWFLVLLFTTLSPDRYLSN CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC WTLILPGAGAGALVSLDSVGQANSSTTSPYASSAIDPRVNYKSISMSKTLINAAAKTLHL CEEEEECCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEE KASEFGTPKLKMPNQTGLMQFSIKATTAKAAQQKAWAHYHSLQALLAQLRRDEIEQREDA EHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRVGMATFANKVSLTQQKLLEFQSIHGLVSLDQFKELALTMERLRHNKVNLVSELQGVKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH SQKMLEIHLSLTPKQAAGLLTLKNDQLFQQLLISYTNVTATLAEYRSRFGKRHPKVVTLQ HHHHHHHHEEECCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC DEQKSVLNALSRRCKVLLGYNNKRLMLMLSADDLDGRAQLMQELLSLNTKAEGLRHRIDA HHHHHHHHHHHHHCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHH LSEQIHDWDHRFNDSNDDAAKLEGLQREHQVATAVFTSALAKMDIGKADIYAAYPLLQLM HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAPTLPEESDNLRTLLAIVGGIAASISLVAGMGMLWIRKPILQKILTS HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKHSYRPLLWLKHYIVNGSQLSAKKRKHAYLVVTSLLLLLIWFLVLLFTTLSPDRYLSN CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC WTLILPGAGAGALVSLDSVGQANSSTTSPYASSAIDPRVNYKSISMSKTLINAAAKTLHL CEEEEECCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEE KASEFGTPKLKMPNQTGLMQFSIKATTAKAAQQKAWAHYHSLQALLAQLRRDEIEQREDA EHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRVGMATFANKVSLTQQKLLEFQSIHGLVSLDQFKELALTMERLRHNKVNLVSELQGVKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH SQKMLEIHLSLTPKQAAGLLTLKNDQLFQQLLISYTNVTATLAEYRSRFGKRHPKVVTLQ HHHHHHHHEEECCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC DEQKSVLNALSRRCKVLLGYNNKRLMLMLSADDLDGRAQLMQELLSLNTKAEGLRHRIDA HHHHHHHHHHHHHCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHH LSEQIHDWDHRFNDSNDDAAKLEGLQREHQVATAVFTSALAKMDIGKADIYAAYPLLQLM HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAPTLPEESDNLRTLLAIVGGIAASISLVAGMGMLWIRKPILQKILTS HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA