| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961253
Identifier: 157961253
GI number: 157961253
Start: 1735201
End: 1736448
Strand: Reverse
Name: 157961253
Synonym: Spea_1427
Alternate gene names: NA
Gene position: 1736448-1735201 (Counterclockwise)
Preceding gene: 157961254
Following gene: 157961252
Centisome position: 33.56
GC content: 49.92
Gene sequence:
>1248_bases ATGGATCCGCAAACCTATACTCCAGAAAATTCTGACGAGTTAATCATCTGGCGCGCTATCACTGGTACCTATCTGTTTTG GCTTTTAGGCGCCATGTATTTAGTCGCCCCCGTCATCGCATGGATATTACTCCTGCGGATGGTGAAGCGAGTCCTGCTGG ATAAGCAGCGTTATACCGTCAGCAATACACAAACCTGCTGGCTAGTGGCGATGGCAGTCATGCTACTCACACTGGTGATA GGCCACCTAACACACGATTTAGGCGTAGCCAAACTCATCAAGTCGAGTATTGGCTGGGCGAAAGGCTGGGCACTATTAGC AATATTCCCATTACTCGGCAGCCTACAGATCCGGCCAGAGCTTATTTACCGCGCCTGCTGTATCGTCTGTAAACATACAC TTATCTTGTTACCCGTCTTCATACTCGCTTGGGCTATTCGTCTTCCCAGCACTCTATACACCTCGCCATTGAGTATCATT GGCGGCCCGGGCCCCGAGTTTTTCAGCGTCAGTCTCTATGAAATCGATCCTGCGAGTGGTCTGCCAAGATGGCGACTATT CACCCCGTGGGCACCTGCTCTGGGAATGCTTGGCAATCTGTTCTTTACTTTTGCCATCCAAGAAAAATCTAAACAATTTA AGTTTTATGGTATTGCAGGCAGTTTCTGCATGATCTTACTGTCGCAGTCGCGCCTGGCCTTAGTGTGCTACCTGCTGCTA GCAGGCTTTTTTATGTTTATCCGCTGGTGTAGATCCCCATGGATTTACTTCGCAGCGACTCCTCTATTTATACTGCTTGG GATTTCAGGAATGTATGTCATCGACAAAATGCAGCAAAGCGTGCAAGCCTTTAAAGCTGCCCGAGCAGGCTCAACCCGTG TACGCCAAGAACTGGCGAATATTGCCCTAGAACGCTGGGCCAATGAGGCTGTGGTGTGGGGGCATGGCATTGTAGAGCGC GGTCCGCACTTAGTAGAATATATGCCGATAGGTTCGCATCACACTTGGTATGGGCTACTGTTTGTAAAGGGAGTGGTGGG CGCTATCGCCCTAGCGATCCCGTTACTTGTAAGCCTGCTTGTATTACTTAAGACCCTCTTTAGCTCAGCCCTCAGTGCTG TAGCGGTTGCGGTGATCCTCCAACTCTTCATGTATACCTTCGGTGAAAACCTCGAGATCCTCGCCTACCTTTTCTGGCCA GGGCTCGTCGTTGTTGGTGTGGCTTTAAAAGAAGGGGCTAGGTTATAG
Upstream 100 bases:
>100_bases CGCCTACATTGCCGGAAGAGTCCGACAATCTACGCACCCTGCTAGCCATTGTCGGCGGTATTGCCGCTTCAATTTCACTG GTTGCAGGAATGGGAATGCT
Downstream 100 bases:
>100_bases GGCGCTATGCTTCTAGGTTCTAGGACGCTTCGCAGGCTCACAGAATAAGCAAAGGTTCTAGGGCCTAGGACGCTTCGCTC CGAGGACGGACTACGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MDPQTYTPENSDELIIWRAITGTYLFWLLGAMYLVAPVIAWILLLRMVKRVLLDKQRYTVSNTQTCWLVAMAVMLLTLVI GHLTHDLGVAKLIKSSIGWAKGWALLAIFPLLGSLQIRPELIYRACCIVCKHTLILLPVFILAWAIRLPSTLYTSPLSII GGPGPEFFSVSLYEIDPASGLPRWRLFTPWAPALGMLGNLFFTFAIQEKSKQFKFYGIAGSFCMILLSQSRLALVCYLLL AGFFMFIRWCRSPWIYFAATPLFILLGISGMYVIDKMQQSVQAFKAARAGSTRVRQELANIALERWANEAVVWGHGIVER GPHLVEYMPIGSHHTWYGLLFVKGVVGAIALAIPLLVSLLVLLKTLFSSALSAVAVAVILQLFMYTFGENLEILAYLFWP GLVVVGVALKEGARL
Sequences:
>Translated_415_residues MDPQTYTPENSDELIIWRAITGTYLFWLLGAMYLVAPVIAWILLLRMVKRVLLDKQRYTVSNTQTCWLVAMAVMLLTLVI GHLTHDLGVAKLIKSSIGWAKGWALLAIFPLLGSLQIRPELIYRACCIVCKHTLILLPVFILAWAIRLPSTLYTSPLSII GGPGPEFFSVSLYEIDPASGLPRWRLFTPWAPALGMLGNLFFTFAIQEKSKQFKFYGIAGSFCMILLSQSRLALVCYLLL AGFFMFIRWCRSPWIYFAATPLFILLGISGMYVIDKMQQSVQAFKAARAGSTRVRQELANIALERWANEAVVWGHGIVER GPHLVEYMPIGSHHTWYGLLFVKGVVGAIALAIPLLVSLLVLLKTLFSSALSAVAVAVILQLFMYTFGENLEILAYLFWP GLVVVGVALKEGARL >Mature_415_residues MDPQTYTPENSDELIIWRAITGTYLFWLLGAMYLVAPVIAWILLLRMVKRVLLDKQRYTVSNTQTCWLVAMAVMLLTLVI GHLTHDLGVAKLIKSSIGWAKGWALLAIFPLLGSLQIRPELIYRACCIVCKHTLILLPVFILAWAIRLPSTLYTSPLSII GGPGPEFFSVSLYEIDPASGLPRWRLFTPWAPALGMLGNLFFTFAIQEKSKQFKFYGIAGSFCMILLSQSRLALVCYLLL AGFFMFIRWCRSPWIYFAATPLFILLGISGMYVIDKMQQSVQAFKAARAGSTRVRQELANIALERWANEAVVWGHGIVER GPHLVEYMPIGSHHTWYGLLFVKGVVGAIALAIPLLVSLLVLLKTLFSSALSAVAVAVILQLFMYTFGENLEILAYLFWP GLVVVGVALKEGARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46336; Mature: 46336
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPQTYTPENSDELIIWRAITGTYLFWLLGAMYLVAPVIAWILLLRMVKRVLLDKQRYTV CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SNTQTCWLVAMAVMLLTLVIGHLTHDLGVAKLIKSSIGWAKGWALLAIFPLLGSLQIRPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH LIYRACCIVCKHTLILLPVFILAWAIRLPSTLYTSPLSIIGGPGPEFFSVSLYEIDPASG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCCCEEEEEEEECCCCC LPRWRLFTPWAPALGMLGNLFFTFAIQEKSKQFKFYGIAGSFCMILLSQSRLALVCYLLL CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHH AGFFMFIRWCRSPWIYFAATPLFILLGISGMYVIDKMQQSVQAFKAARAGSTRVRQELAN HHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IALERWANEAVVWGHGIVERGPHLVEYMPIGSHHTWYGLLFVKGVVGAIALAIPLLVSLL HHHHHHCCCCEEECCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLLKTLFSSALSAVAVAVILQLFMYTFGENLEILAYLFWPGLVVVGVALKEGARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDPQTYTPENSDELIIWRAITGTYLFWLLGAMYLVAPVIAWILLLRMVKRVLLDKQRYTV CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SNTQTCWLVAMAVMLLTLVIGHLTHDLGVAKLIKSSIGWAKGWALLAIFPLLGSLQIRPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH LIYRACCIVCKHTLILLPVFILAWAIRLPSTLYTSPLSIIGGPGPEFFSVSLYEIDPASG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCCCEEEEEEEECCCCC LPRWRLFTPWAPALGMLGNLFFTFAIQEKSKQFKFYGIAGSFCMILLSQSRLALVCYLLL CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHH AGFFMFIRWCRSPWIYFAATPLFILLGISGMYVIDKMQQSVQAFKAARAGSTRVRQELAN HHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IALERWANEAVVWGHGIVERGPHLVEYMPIGSHHTWYGLLFVKGVVGAIALAIPLLVSLL HHHHHHCCCCEEECCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLLKTLFSSALSAVAVAVILQLFMYTFGENLEILAYLFWPGLVVVGVALKEGARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA