| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is tuaG [H]
Identifier: 157961239
GI number: 157961239
Start: 1714661
End: 1715428
Strand: Direct
Name: tuaG [H]
Synonym: Spea_1412
Alternate gene names: 157961239
Gene position: 1714661-1715428 (Clockwise)
Preceding gene: 157961238
Following gene: 157961240
Centisome position: 33.14
GC content: 34.38
Gene sequence:
>768_bases ATGAGTGATCCTAATAGTCCTTTAATCAGCATAGTTATGCCTTTATTTAACGTCGAAAAATATGTTGAGGAATCAATAGA TAGTGTTGTAAATCAATCGTATTCTAATTGGGAGTTGTTGTTGGTTGACGACTGCTCAACAGATGATACGTGTAAAATTA TTGAGAGTAAATTCTCTACAGATAGTCGGATTAAACTATTTCATAATGAGATGAATTCTGGTGCTGGTGTTTCACGTAAT GTCGGCCTAGCTAATTCAAGTGGTATATATATTGCTTTTTTAGATTCTGATGATCTCTGGTGTGATAATAAGCTAAAACT TCAGGTCAGTTTTATGCTTAATAATAAGGCTGCTATATCCCATACTAGTTACAGTTTCATTAATGAGTTAGGCATAGATA TTCCTGGGCGAGTTACAGCATCAAAAGTGTTGGATTTAGATTCTTATATGCGAACAACCGAAATTGGCATGTCAACTTCC CTAATTTGTAGAACAACTGTCGGTGATTTTACTTTTGACTCTATGCGTACAAGGCAAGATACAAAGCTTTGGTTAACATT GTTAGGTCGAGGTTTTGTTTCGAAGGGATTGAATGAACAGTTAGTAAAATATAGAGCTAGAGATGGGCAGATTAGTAAAA ATAAGCTTGCTGCTGCTCGAACGACACTAAAGGTATACCTTTCAGTTAAAGAGATTTCAGTAGCAAGGCGTCTTTTGAAT TTTTCATATTATTGTATTAATGCTACATTGAAAAGGATAAAAAGATAA
Upstream 100 bases:
>100_bases AACAAAAGGAGCTTTATAAGTGTTAACTTGTTGAGGTTAGTTAAAGTTTTTTACATTCGACCTGTTTTTCATATGTTCAA ATTTTGGATGGTAAAGTAAA
Downstream 100 bases:
>100_bases ACTTTATATTCTTTATTTATTTTTCATTCATTTATATAAATATTTTTTAGGATCGGTATGTCTAATAATTTTCTTCCTTT TGCATTACCTGAAATTGGTA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSDPNSPLISIVMPLFNVEKYVEESIDSVVNQSYSNWELLLVDDCSTDDTCKIIESKFSTDSRIKLFHNEMNSGAGVSRN VGLANSSGIYIAFLDSDDLWCDNKLKLQVSFMLNNKAAISHTSYSFINELGIDIPGRVTASKVLDLDSYMRTTEIGMSTS LICRTTVGDFTFDSMRTRQDTKLWLTLLGRGFVSKGLNEQLVKYRARDGQISKNKLAAARTTLKVYLSVKEISVARRLLN FSYYCINATLKRIKR
Sequences:
>Translated_255_residues MSDPNSPLISIVMPLFNVEKYVEESIDSVVNQSYSNWELLLVDDCSTDDTCKIIESKFSTDSRIKLFHNEMNSGAGVSRN VGLANSSGIYIAFLDSDDLWCDNKLKLQVSFMLNNKAAISHTSYSFINELGIDIPGRVTASKVLDLDSYMRTTEIGMSTS LICRTTVGDFTFDSMRTRQDTKLWLTLLGRGFVSKGLNEQLVKYRARDGQISKNKLAAARTTLKVYLSVKEISVARRLLN FSYYCINATLKRIKR >Mature_254_residues SDPNSPLISIVMPLFNVEKYVEESIDSVVNQSYSNWELLLVDDCSTDDTCKIIESKFSTDSRIKLFHNEMNSGAGVSRNV GLANSSGIYIAFLDSDDLWCDNKLKLQVSFMLNNKAAISHTSYSFINELGIDIPGRVTASKVLDLDSYMRTTEIGMSTSL ICRTTVGDFTFDSMRTRQDTKLWLTLLGRGFVSKGLNEQLVKYRARDGQISKNKLAAARTTLKVYLSVKEISVARRLLNF SYYCINATLKRIKR
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788372, Length=120, Percent_Identity=38.3333333333333, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1790044, Length=90, Percent_Identity=31.1111111111111, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787259, Length=95, Percent_Identity=34.7368421052632, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28724; Mature: 28593
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPNSPLISIVMPLFNVEKYVEESIDSVVNQSYSNWELLLVDDCSTDDTCKIIESKFST CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCC DSRIKLFHNEMNSGAGVSRNVGLANSSGIYIAFLDSDDLWCDNKLKLQVSFMLNNKAAIS CCEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCEEEEEEEEEECCCEEEC HTSYSFINELGIDIPGRVTASKVLDLDSYMRTTEIGMSTSLICRTTVGDFTFDSMRTRQD CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCH TKLWLTLLGRGFVSKGLNEQLVKYRARDGQISKNKLAAARTTLKVYLSVKEISVARRLLN HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEHHHHHHHHHHHH FSYYCINATLKRIKR HHHHHHHHHHHHHCC >Mature Secondary Structure SDPNSPLISIVMPLFNVEKYVEESIDSVVNQSYSNWELLLVDDCSTDDTCKIIESKFST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCC DSRIKLFHNEMNSGAGVSRNVGLANSSGIYIAFLDSDDLWCDNKLKLQVSFMLNNKAAIS CCEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCEEEEEEEEEECCCEEEC HTSYSFINELGIDIPGRVTASKVLDLDSYMRTTEIGMSTSLICRTTVGDFTFDSMRTRQD CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCH TKLWLTLLGRGFVSKGLNEQLVKYRARDGQISKNKLAAARTTLKVYLSVKEISVARRLLN HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEHHHHHHHHHHHH FSYYCINATLKRIKR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10048024; 9384377 [H]