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The map label for this gene is yfbE [C]

Identifier: 157961240

GI number: 157961240

Start: 1715486

End: 1716649

Strand: Direct

Name: yfbE [C]

Synonym: Spea_1413

Alternate gene names: 157961240

Gene position: 1715486-1716649 (Clockwise)

Preceding gene: 157961239

Following gene: 157961241

Centisome position: 33.15

GC content: 37.2

Gene sequence:

>1164_bases
ATGTCTAATAATTTTCTTCCTTTTGCATTACCTGAAATTGGTAATGAAGAAATAGCTGAAGTGGTAGATTCATTAAAAAG
TGGTTGGGTAACTACTGGGCCAAAGACAAAGCGTTTTGAATTAGAGTTTGTAGACTTTCTTGGTGATTCTAGTTTAGAAG
CGATTGCGGTTAATTCCGCGACTTCTGGATTACATTTAGCCCTAGAAGCGTTTGGTGTAGGGGAAGGTGATGAAGTTATT
GTTCCTACTTATACATTTACTGCAACAGCCGAAATTGTCCGTTATTTAGGTGCAACACCTATTATGGTTGATGTTGATCC
TCATACGTTTAACATGACGCATGAATCTTTTGCGAACGCCATTTCTGAGAGAACAAAGGCTGTTATTCCTGTGCATTTTG
CGGGTTTGTCGTGTGATATGGATTCAATACTGTCTGTAGCTAAGGCTAATAATATTTATGTTGTTGAAGATGCTGCACAT
GCGCTGCCAACTAAATATAAAGGTAAGTTAATAGGTACTTTAGAAAGTGATGTAACAGTTTTTAGCTTCTATGCAAATAA
AACTATGACTACTGGTGAAGGCGGTATGGTTGTCACTCGTAATCGTGAGATAGCTAAACGCTGTAAAATCATGAGATTAC
ACGGGATAAGTAGAGATGCCTTTGACCGGTATACTTCAACTAAGCCTGCATGGGCGTATGAAGTTATTGCACCCGGTTAT
AAATATAATATGCCAGATATTTCAGCTGCGATTGGTATTCACCAATTAGTTAAGTTGCCTGCTTTTCAAAAGAAGCGGGA
AGCAATGGCTGAATATTATAACGAAGAGTTACAAAACTTACCTATCACTTTGCCTTCTTTACCGAAGGAGAGAGATACTC
ATGCATGGCATTTGTATCCAATTAAACTTGATACAACGTTAGCAATATCAAGAGAGGTTTTCATAGAAAAAATGGCTGAT
TTAGGTATTGGGTGTTCAGTTCACTTTATACCTCTGCATTTGCATCCATATTGGAGAGATACGTATAAGCTTTGCCCAGA
AATGTATCCTATTGCACAAGATATTTATGAGAGAGAAGTATCATTACCTTTGTATACAAAGATGGTAGAGTCTGATTTGA
AAAGAGTTGTTGATGCAGTTAAGAAGGTATTATTAGGTGATTAA

Upstream 100 bases:

>100_bases
ATATTATTGTATTAATGCTACATTGAAAAGGATAAAAAGATAAACTTTATATTCTTTATTTATTTTTCATTCATTTATAT
AAATATTTTTTAGGATCGGT

Downstream 100 bases:

>100_bases
ACGGACTTTTGATTTTCTTCTATCTGGTGTCGGGTTATTATTTTTATCGCCTTTATTTTTAATCGTTGCTATATGGATTA
AAGTTGACTCTCCTGGGCCT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSNNFLPFALPEIGNEEIAEVVDSLKSGWVTTGPKTKRFELEFVDFLGDSSLEAIAVNSATSGLHLALEAFGVGEGDEVI
VPTYTFTATAEIVRYLGATPIMVDVDPHTFNMTHESFANAISERTKAVIPVHFAGLSCDMDSILSVAKANNIYVVEDAAH
ALPTKYKGKLIGTLESDVTVFSFYANKTMTTGEGGMVVTRNREIAKRCKIMRLHGISRDAFDRYTSTKPAWAYEVIAPGY
KYNMPDISAAIGIHQLVKLPAFQKKREAMAEYYNEELQNLPITLPSLPKERDTHAWHLYPIKLDTTLAISREVFIEKMAD
LGIGCSVHFIPLHLHPYWRDTYKLCPEMYPIAQDIYEREVSLPLYTKMVESDLKRVVDAVKKVLLGD

Sequences:

>Translated_387_residues
MSNNFLPFALPEIGNEEIAEVVDSLKSGWVTTGPKTKRFELEFVDFLGDSSLEAIAVNSATSGLHLALEAFGVGEGDEVI
VPTYTFTATAEIVRYLGATPIMVDVDPHTFNMTHESFANAISERTKAVIPVHFAGLSCDMDSILSVAKANNIYVVEDAAH
ALPTKYKGKLIGTLESDVTVFSFYANKTMTTGEGGMVVTRNREIAKRCKIMRLHGISRDAFDRYTSTKPAWAYEVIAPGY
KYNMPDISAAIGIHQLVKLPAFQKKREAMAEYYNEELQNLPITLPSLPKERDTHAWHLYPIKLDTTLAISREVFIEKMAD
LGIGCSVHFIPLHLHPYWRDTYKLCPEMYPIAQDIYEREVSLPLYTKMVESDLKRVVDAVKKVLLGD
>Mature_386_residues
SNNFLPFALPEIGNEEIAEVVDSLKSGWVTTGPKTKRFELEFVDFLGDSSLEAIAVNSATSGLHLALEAFGVGEGDEVIV
PTYTFTATAEIVRYLGATPIMVDVDPHTFNMTHESFANAISERTKAVIPVHFAGLSCDMDSILSVAKANNIYVVEDAAHA
LPTKYKGKLIGTLESDVTVFSFYANKTMTTGEGGMVVTRNREIAKRCKIMRLHGISRDAFDRYTSTKPAWAYEVIAPGYK
YNMPDISAAIGIHQLVKLPAFQKKREAMAEYYNEELQNLPITLPSLPKERDTHAWHLYPIKLDTTLAISREVFIEKMADL
GIGCSVHFIPLHLHPYWRDTYKLCPEMYPIAQDIYEREVSLPLYTKMVESDLKRVVDAVKKVLLGD

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=42.4083769633508, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI2367285, Length=378, Percent_Identity=30.952380952381, Blast_Score=164, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43235; Mature: 43104

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNFLPFALPEIGNEEIAEVVDSLKSGWVTTGPKTKRFELEFVDFLGDSSLEAIAVNSA
CCCCCCCEECCCCCCHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCEEEEECCC
TSGLHLALEAFGVGEGDEVIVPTYTFTATAEIVRYLGATPIMVDVDPHTFNMTHESFANA
CCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCEEEECCCCEECCCHHHHHHH
ISERTKAVIPVHFAGLSCDMDSILSVAKANNIYVVEDAAHALPTKYKGKLIGTLESDVTV
HHHHCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHCCCCCCCEEEEEECCCCEE
FSFYANKTMTTGEGGMVVTRNREIAKRCKIMRLHGISRDAFDRYTSTKPAWAYEVIAPGY
EEEEECCEEECCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCC
KYNMPDISAAIGIHQLVKLPAFQKKREAMAEYYNEELQNLPITLPSLPKERDTHAWHLYP
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEE
IKLDTTLAISREVFIEKMADLGIGCSVHFIPLHLHPYWRDTYKLCPEMYPIAQDIYEREV
EEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHC
SLPLYTKMVESDLKRVVDAVKKVLLGD
CCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNNFLPFALPEIGNEEIAEVVDSLKSGWVTTGPKTKRFELEFVDFLGDSSLEAIAVNSA
CCCCCCEECCCCCCHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCEEEEECCC
TSGLHLALEAFGVGEGDEVIVPTYTFTATAEIVRYLGATPIMVDVDPHTFNMTHESFANA
CCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCEEEECCCCEECCCHHHHHHH
ISERTKAVIPVHFAGLSCDMDSILSVAKANNIYVVEDAAHALPTKYKGKLIGTLESDVTV
HHHHCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHCCCCCCCEEEEEECCCCEE
FSFYANKTMTTGEGGMVVTRNREIAKRCKIMRLHGISRDAFDRYTSTKPAWAYEVIAPGY
EEEEECCEEECCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCC
KYNMPDISAAIGIHQLVKLPAFQKKREAMAEYYNEELQNLPITLPSLPKERDTHAWHLYP
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEE
IKLDTTLAISREVFIEKMADLGIGCSVHFIPLHLHPYWRDTYKLCPEMYPIAQDIYEREV
EEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHC
SLPLYTKMVESDLKRVVDAVKKVLLGD
CCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]