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The map label for this gene is yclF [H]

Identifier: 157961220

GI number: 157961220

Start: 1690742

End: 1692247

Strand: Reverse

Name: yclF [H]

Synonym: Spea_1393

Alternate gene names: 157961220

Gene position: 1692247-1690742 (Counterclockwise)

Preceding gene: 157961243

Following gene: 157961217

Centisome position: 32.7

GC content: 44.49

Gene sequence:

>1506_bases
ATGAACGCAGCAAAACCCAAGGGGACGATGCTCGGGCATCCAACGGGACTATTCCTGTTGTTTACAACAGAGTTATGGGA
ACGTTTTAGTTATTACGCAATGCGCGCGATCTTGGTGCTTTATCTAGTAGACCAAGTCAGTAATCAAGGTGGTGGTGGTC
TTGGTTGGACACAGGCTGATGCCCTTTCGCTATACGGAACATTTACCGCGCTAGTTTACCTTACGCCACTTTTCGGCGGT
TGGTTAGCCGATAATATTTTGGGCCAACGTAAATCGATTTATATCGGTGGCGCATTGATGGCTGCTGGTCAGTTCTTGTT
AGCTGCTCCACATGAGTGGGTTCCAGGCTCTGCAACCATGGTATTCTACATTGGTTTAGGTACCCTGATCATTGGTAATG
GTCTTTTCAAGCCAAACATCTCAACCATGGTAGGTGACTTATATGAAGAAGGTGATCACCGTCGTGACGGCGCATTCACT
ATCTTCTACATGGGTATTAACTTAGGCGCGGCATTATCTGGTTTTGTAGTAGCCTGGGCTTATACTAACTTTGGTCATAG
CGCTATCGTTGACGGTAAAGAAGTTTTCATCAATAACTGGCAGGCAGGTTTCTTCTGTGCTGGTATTGGTATGATTCTTT
CGCTAATCATTCAATTTGTATTTGCTCAAAAATTACTTGGCGATATCGGTACCGTTCCTGCTGCAAAACTAGAAAAGCAG
AAAGCTGCTGAATCTGGTCAAGTGCGTAAAGAACCTTTAACTAAGATTGAACGCGATCGCATTAAAGTGATTATGGTTAT
GGGTCTGTTTACCATCATATTCTGGGCAGGTTTTGAACAGGCCGGCGGCCTGATGAACCTATTCACTAACGACTTTACTG
ATCGTATGATTGGCGGCTGGGAAGTCCCAACCACTTACTTCCAATCTTTAAACGCTATCTTTATTGTTTTATTTGCTCCT
GTGATTGCCTCTATCTGGATCCGTTTAGGCAAAAATGAACCAAACTCTCCAGTGAAATTTGCACTAGGTCTAGTACTACT
AGGTATTGGTTTCCTATTCATGATCGGTGCCGTTTTACAAATGGACGGTGACGCTAGTGCTAAATCAAGCATGTGGTGGT
TAGTGGGTGCATACTTCTTCCATACAATGGGTGAATTATGTCTATCACCTATTGGTCTATCTATGGTGACCAAGCTTGCT
CCACTGCGTATTGCATCGTTAATGATGGGCGCATGGTTCCTATTCATCGCCGCAGCTAACTTTGTTGCCGGTGTTGTGGG
CTCTATGATTGGTCACAGTGGCGCTAAAGAAGAGCAACTTGCTAATGCAATGTCTATCTTCGCAGGTATCGCGATTGTAG
CTGCAATTTCTGGTGTTGTTCTTTACTTCCTTGCTGACAAGCTTGTTGACTGGATGCATGGCGCTGAAGGTGGCCCGCAT
ACTGAAGAAGAAGCTTTGACAGAAGAAATCGCTATTACTGCAGAGCATGAAGCTATTAGAAGATAG

Upstream 100 bases:

>100_bases
AACTGATTGTGTGCATTCAAAGCTGTAATAATTTAAGTAAATCAAATTTCTGTAGTGATCATTGAACTGCAGGCAATCAC
AAGCGAAGGTGGAACAATAC

Downstream 100 bases:

>100_bases
GTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGCAATACAATAAAATGCTTCGTAGT
AATACGAAGCATTTTTTGTT

Product: amino acid/peptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MNAAKPKGTMLGHPTGLFLLFTTELWERFSYYAMRAILVLYLVDQVSNQGGGGLGWTQADALSLYGTFTALVYLTPLFGG
WLADNILGQRKSIYIGGALMAAGQFLLAAPHEWVPGSATMVFYIGLGTLIIGNGLFKPNISTMVGDLYEEGDHRRDGAFT
IFYMGINLGAALSGFVVAWAYTNFGHSAIVDGKEVFINNWQAGFFCAGIGMILSLIIQFVFAQKLLGDIGTVPAAKLEKQ
KAAESGQVRKEPLTKIERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLFTNDFTDRMIGGWEVPTTYFQSLNAIFIVLFAP
VIASIWIRLGKNEPNSPVKFALGLVLLGIGFLFMIGAVLQMDGDASAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLA
PLRIASLMMGAWFLFIAAANFVAGVVGSMIGHSGAKEEQLANAMSIFAGIAIVAAISGVVLYFLADKLVDWMHGAEGGPH
TEEEALTEEIAITAEHEAIRR

Sequences:

>Translated_501_residues
MNAAKPKGTMLGHPTGLFLLFTTELWERFSYYAMRAILVLYLVDQVSNQGGGGLGWTQADALSLYGTFTALVYLTPLFGG
WLADNILGQRKSIYIGGALMAAGQFLLAAPHEWVPGSATMVFYIGLGTLIIGNGLFKPNISTMVGDLYEEGDHRRDGAFT
IFYMGINLGAALSGFVVAWAYTNFGHSAIVDGKEVFINNWQAGFFCAGIGMILSLIIQFVFAQKLLGDIGTVPAAKLEKQ
KAAESGQVRKEPLTKIERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLFTNDFTDRMIGGWEVPTTYFQSLNAIFIVLFAP
VIASIWIRLGKNEPNSPVKFALGLVLLGIGFLFMIGAVLQMDGDASAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLA
PLRIASLMMGAWFLFIAAANFVAGVVGSMIGHSGAKEEQLANAMSIFAGIAIVAAISGVVLYFLADKLVDWMHGAEGGPH
TEEEALTEEIAITAEHEAIRR
>Mature_501_residues
MNAAKPKGTMLGHPTGLFLLFTTELWERFSYYAMRAILVLYLVDQVSNQGGGGLGWTQADALSLYGTFTALVYLTPLFGG
WLADNILGQRKSIYIGGALMAAGQFLLAAPHEWVPGSATMVFYIGLGTLIIGNGLFKPNISTMVGDLYEEGDHRRDGAFT
IFYMGINLGAALSGFVVAWAYTNFGHSAIVDGKEVFINNWQAGFFCAGIGMILSLIIQFVFAQKLLGDIGTVPAAKLEKQ
KAAESGQVRKEPLTKIERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLFTNDFTDRMIGGWEVPTTYFQSLNAIFIVLFAP
VIASIWIRLGKNEPNSPVKFALGLVLLGIGFLFMIGAVLQMDGDASAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLA
PLRIASLMMGAWFLFIAAANFVAGVVGSMIGHSGAKEEQLANAMSIFAGIAIVAAISGVVLYFLADKLVDWMHGAEGGPH
TEEEALTEEIAITAEHEAIRR

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=399, Percent_Identity=28.8220551378446, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI226371746, Length=169, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI226371748, Length=166, Percent_Identity=28.9156626506024, Blast_Score=79, Evalue=7e-15,
Organism=Escherichia coli, GI1787922, Length=496, Percent_Identity=30.4435483870968, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1789911, Length=527, Percent_Identity=28.0834914611006, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1790572, Length=465, Percent_Identity=29.0322580645161, Blast_Score=183, Evalue=3e-47,
Organism=Escherichia coli, GI1786927, Length=511, Percent_Identity=28.1800391389432, Blast_Score=170, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI71987453, Length=384, Percent_Identity=24.21875, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17569141, Length=370, Percent_Identity=24.8648648648649, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17541704, Length=356, Percent_Identity=26.685393258427, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571098, Length=370, Percent_Identity=27.5675675675676, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28571102, Length=370, Percent_Identity=27.5675675675676, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28571100, Length=370, Percent_Identity=27.5675675675676, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24639585, Length=168, Percent_Identity=34.5238095238095, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24639583, Length=168, Percent_Identity=34.5238095238095, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24639581, Length=168, Percent_Identity=34.5238095238095, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 54275; Mature: 54275

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAKPKGTMLGHPTGLFLLFTTELWERFSYYAMRAILVLYLVDQVSNQGGGGLGWTQAD
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ALSLYGTFTALVYLTPLFGGWLADNILGQRKSIYIGGALMAAGQFLLAAPHEWVPGSATM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCHHEECCCCCCCCCCCE
VFYIGLGTLIIGNGLFKPNISTMVGDLYEEGDHRRDGAFTIFYMGINLGAALSGFVVAWA
EEEEHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHEE
YTNFGHSAIVDGKEVFINNWQAGFFCAGIGMILSLIIQFVFAQKLLGDIGTVPAAKLEKQ
ECCCCCCCEECCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KAAESGQVRKEPLTKIERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLFTNDFTDRMIGGW
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCC
EVPTTYFQSLNAIFIVLFAPVIASIWIRLGKNEPNSPVKFALGLVLLGIGFLFMIGAVLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MDGDASAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIASLMMGAWFLFIAAAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVAGVVGSMIGHSGAKEEQLANAMSIFAGIAIVAAISGVVLYFLADKLVDWMHGAEGGPH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TEEEALTEEIAITAEHEAIRR
CHHHHHHHHHHEEECHHHHCC
>Mature Secondary Structure
MNAAKPKGTMLGHPTGLFLLFTTELWERFSYYAMRAILVLYLVDQVSNQGGGGLGWTQAD
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ALSLYGTFTALVYLTPLFGGWLADNILGQRKSIYIGGALMAAGQFLLAAPHEWVPGSATM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCHHEECCCCCCCCCCCE
VFYIGLGTLIIGNGLFKPNISTMVGDLYEEGDHRRDGAFTIFYMGINLGAALSGFVVAWA
EEEEHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHEE
YTNFGHSAIVDGKEVFINNWQAGFFCAGIGMILSLIIQFVFAQKLLGDIGTVPAAKLEKQ
ECCCCCCCEECCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KAAESGQVRKEPLTKIERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLFTNDFTDRMIGGW
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCC
EVPTTYFQSLNAIFIVLFAPVIASIWIRLGKNEPNSPVKFALGLVLLGIGFLFMIGAVLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MDGDASAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIASLMMGAWFLFIAAAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVAGVVGSMIGHSGAKEEQLANAMSIFAGIAIVAAISGVVLYFLADKLVDWMHGAEGGPH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TEEEALTEEIAITAEHEAIRR
CHHHHHHHHHHEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]