| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961215
Identifier: 157961215
GI number: 157961215
Start: 1685059
End: 1685463
Strand: Direct
Name: 157961215
Synonym: Spea_1387
Alternate gene names: NA
Gene position: 1685059-1685463 (Clockwise)
Preceding gene: 157961214
Following gene: 157961218
Centisome position: 32.56
GC content: 45.19
Gene sequence:
>405_bases ATGATTGTCGAAGAAATTTTAATTGCTACTGCGTTGCTGTTTATCATTGCTTGTCTTGCATTGGTGCTTTATTTACAAAA GCAAACGAGTAAGTTGCGTGCAAAAGTCGATGCACTGACCGTGTTAGTGAAAGAAAGCGATAAGCAAAGAGAAGCCGTTA AGCGTGAGCTACAGGAGCTAAGAAGCGGTACGATTGGTGTTGGGCGTCGTATGTTAGAGTTAGAGAAAAAGCTTGCACAA CAAGACGCTAAATTTGAAGAGAGCAGCCAGCAAGACCCACAGGCTAGGCTGTATTCTCGCGCAATGAAGATGGTTGCCTT GGGCGCCGGCGTTGCAGAGCTTATTGAAGAGTGTGAGTTACCTAAAGCCGAAGCTGAGCTGTTGATCCGATTGCATGGGA AATAA
Upstream 100 bases:
>100_bases AGGACCTAGCTCCTTCTTAGCTTTAACGCCCTCGAAGTGATGCAGTCACGCTCTAGCAGCGCAGTGTCCTTCTTAGATAT TTTTATAATAAGAGTCATTA
Downstream 100 bases:
>100_bases GAAGGGCGGACTGCGTCCTTCTAGGTTCTAGGGCGTTCGCAGGCTCACTTCGAGGACGCTTCGCTTCTAGATCCTAGGGC GGACTTTGTCCTTCTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIVEEILIATALLFIIACLALVLYLQKQTSKLRAKVDALTVLVKESDKQREAVKRELQELRSGTIGVGRRMLELEKKLAQ QDAKFEESSQQDPQARLYSRAMKMVALGAGVAELIEECELPKAEAELLIRLHGK
Sequences:
>Translated_134_residues MIVEEILIATALLFIIACLALVLYLQKQTSKLRAKVDALTVLVKESDKQREAVKRELQELRSGTIGVGRRMLELEKKLAQ QDAKFEESSQQDPQARLYSRAMKMVALGAGVAELIEECELPKAEAELLIRLHGK >Mature_134_residues MIVEEILIATALLFIIACLALVLYLQKQTSKLRAKVDALTVLVKESDKQREAVKRELQELRSGTIGVGRRMLELEKKLAQ QDAKFEESSQQDPQARLYSRAMKMVALGAGVAELIEECELPKAEAELLIRLHGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15018; Mature: 15018
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVEEILIATALLFIIACLALVLYLQKQTSKLRAKVDALTVLVKESDKQREAVKRELQEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RSGTIGVGRRMLELEKKLAQQDAKFEESSQQDPQARLYSRAMKMVALGAGVAELIEECEL HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC PKAEAELLIRLHGK CHHHHHHHHHHCCC >Mature Secondary Structure MIVEEILIATALLFIIACLALVLYLQKQTSKLRAKVDALTVLVKESDKQREAVKRELQEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RSGTIGVGRRMLELEKKLAQQDAKFEESSQQDPQARLYSRAMKMVALGAGVAELIEECEL HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC PKAEAELLIRLHGK CHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA