| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mlaA [H]
Identifier: 157961218
GI number: 157961218
Start: 1688215
End: 1688982
Strand: Direct
Name: mlaA [H]
Synonym: Spea_1390
Alternate gene names: 157961218
Gene position: 1688215-1688982 (Clockwise)
Preceding gene: 157961215
Following gene: 157961219
Centisome position: 32.63
GC content: 44.4
Gene sequence:
>768_bases ATGAAGTTTAAATGGATTGTGCTTTCTCTGGCGATATTTGGAATGCCTTCAATTGAAGCTGCAGAAGATACCACTACGGA CGGTGAGCAACAGATAACGGTAACCTATAATGACCCACGAGATCCGATAGAGGGCTTTAACCGAGCCATGTGGGACTTTA ACTATCTGTTTATGGACCGTTATTTTTACCGCCCCGTTGCCCATGGCTATAATGATTACATTCCTCATCCAGTAAAAAGT GGGGTTAATAATTTTGTACTAAACCTCGAAGAGCCTTCAACCTTAGTTAACAATACATTACAAGGAAATTGGGGCTGGGC TGCTAATGCTGGCGGCCGATTTACGGTCAATACCACATTAGGCCTGTTAGGGGTGATTGATGTTGCCGAGATGATGGGGA TGACTCGTAAGCAAGATGCTTTTAACGAAGTGCTTGGTTATTATGGTGTACCGAATGGCCCGTACTTCATGGCGCCATTT TTCGGTCCTTATGTTACTCGTGAGCTCGCGTCAGACTGGGTTGATGATCTATACTTCCCTCTGTCTGAGCTGACGTTCTG GCAGTCAGTCTTAAAATGGGGTCTTAAAAACTTGCATACGCGAGCGTCTGCAATCGATCAGGAACGATTGGTTGATAATG CGCTCGACCCATATACTTTTGTGAAGGATGCATACTTTCAGCACATGGACTACAAGGTATATGACGGTGACATTCCTCAA AGTGACGACGATGAGTTACTTGATGAGTACATGCAGGAATTAGAATAG
Upstream 100 bases:
>100_bases AAATCGTTGAGATTTATGTGTGAATATTTATACTCTAGTCAGTGAGTCGGAATGGGCAGGCAACGACTAGTACAACGAAC TCCTTTTCAAAGAGACAATT
Downstream 100 bases:
>100_bases CATTAGAATAAGTGGACAAATAATAATAACTGCTCCGCTTAAAGCGTAAACAAGACACAAGGACGTCGGTTTTCGCTGTT GTCAAAGGGCAGCTTATGGC
Product: VacJ family lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKFKWIVLSLAIFGMPSIEAAEDTTTDGEQQITVTYNDPRDPIEGFNRAMWDFNYLFMDRYFYRPVAHGYNDYIPHPVKS GVNNFVLNLEEPSTLVNNTLQGNWGWAANAGGRFTVNTTLGLLGVIDVAEMMGMTRKQDAFNEVLGYYGVPNGPYFMAPF FGPYVTRELASDWVDDLYFPLSELTFWQSVLKWGLKNLHTRASAIDQERLVDNALDPYTFVKDAYFQHMDYKVYDGDIPQ SDDDELLDEYMQELE
Sequences:
>Translated_255_residues MKFKWIVLSLAIFGMPSIEAAEDTTTDGEQQITVTYNDPRDPIEGFNRAMWDFNYLFMDRYFYRPVAHGYNDYIPHPVKS GVNNFVLNLEEPSTLVNNTLQGNWGWAANAGGRFTVNTTLGLLGVIDVAEMMGMTRKQDAFNEVLGYYGVPNGPYFMAPF FGPYVTRELASDWVDDLYFPLSELTFWQSVLKWGLKNLHTRASAIDQERLVDNALDPYTFVKDAYFQHMDYKVYDGDIPQ SDDDELLDEYMQELE >Mature_255_residues MKFKWIVLSLAIFGMPSIEAAEDTTTDGEQQITVTYNDPRDPIEGFNRAMWDFNYLFMDRYFYRPVAHGYNDYIPHPVKS GVNNFVLNLEEPSTLVNNTLQGNWGWAANAGGRFTVNTTLGLLGVIDVAEMMGMTRKQDAFNEVLGYYGVPNGPYFMAPF FGPYVTRELASDWVDDLYFPLSELTFWQSVLKWGLKNLHTRASAIDQERLVDNALDPYTFVKDAYFQHMDYKVYDGDIPQ SDDDELLDEYMQELE
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=246, Percent_Identity=38.2113821138211, Blast_Score=160, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 29371; Mature: 29371
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKWIVLSLAIFGMPSIEAAEDTTTDGEQQITVTYNDPRDPIEGFNRAMWDFNYLFMDR CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH YFYRPVAHGYNDYIPHPVKSGVNNFVLNLEEPSTLVNNTLQGNWGWAANAGGRFTVNTTL HHHHHHHCCCCCCCCCHHHCCCCCEEEECCCCHHHHHCCCCCCCCEECCCCCEEEEEHHH GLLGVIDVAEMMGMTRKQDAFNEVLGYYGVPNGPYFMAPFFGPYVTRELASDWVDDLYFP HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH LSELTFWQSVLKWGLKNLHTRASAIDQERLVDNALDPYTFVKDAYFQHMDYKVYDGDIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCC SDDDELLDEYMQELE CCCHHHHHHHHHHCC >Mature Secondary Structure MKFKWIVLSLAIFGMPSIEAAEDTTTDGEQQITVTYNDPRDPIEGFNRAMWDFNYLFMDR CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH YFYRPVAHGYNDYIPHPVKSGVNNFVLNLEEPSTLVNNTLQGNWGWAANAGGRFTVNTTL HHHHHHHCCCCCCCCCHHHCCCCCEEEECCCCHHHHHCCCCCCCCEECCCCCEEEEEHHH GLLGVIDVAEMMGMTRKQDAFNEVLGYYGVPNGPYFMAPFFGPYVTRELASDWVDDLYFP HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH LSELTFWQSVLKWGLKNLHTRASAIDQERLVDNALDPYTFVKDAYFQHMDYKVYDGDIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCC SDDDELLDEYMQELE CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]