| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is cheW [H]
Identifier: 157961214
GI number: 157961214
Start: 1684185
End: 1684676
Strand: Direct
Name: cheW [H]
Synonym: Spea_1386
Alternate gene names: 157961214
Gene position: 1684185-1684676 (Clockwise)
Preceding gene: 157961213
Following gene: 157961215
Centisome position: 32.55
GC content: 42.89
Gene sequence:
>492_bases ATGACAAGTTCAAACAGTGTAGCCGTAGCAGCGGGAACCGAAGATGCAGTTTTACAGTGGGTAACATTTAAGCTGGATAA CGAAACTTATGGTATCAACGTTATGCAGGTTCAAGAAGTGTTGCGTTATACCGAGATAGCACCAGTACCCGGTGCACCTC ATTATGTGTTAGGTATCATTAACTTACGTGGAAACGTTGTAACCGTTATTGATACTCGCTCACGCTTTGGCTTAGCTTCA GCCGATGTTAACGACTCGACACGTATTGTGATTATTGAAGCTGAAAAGCAGGTAATCGGTATTCTAGTCGACAGTGTGGC AGAGGTTGTTTACCTGCGTGGTTCGGAAATTGATAATGCACCGAATGTGGGTACAGAAGAGAGCGCTAAGTTCATTCAGG GCGTTAGCAATCGAGATGGTGAATTATTGATTTTGGTTGATTTAGACAAGTTACTATCAGATGAAGAGTGGATAGAGCTG ACGCAGATTTAA
Upstream 100 bases:
>100_bases AAACATAGCAAGACAGTTAGTTTTATTGGCAAAAGTACTAACAATAAGTATTCACAAATAGTTTAGAAATATAGCTGCAA AGCTATTGATTGAGGCGATT
Downstream 100 bases:
>100_bases TTTAACAGAAGATCCTAGGGCGCTTTGCTTATAGAGCGGACTTCGTCCTGCTAGGTCCTAGGAAATGCAAATGCAAAAGT TTGTATCGATTAAGTGTAGA
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTSSNSVAVAAGTEDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLAS ADVNDSTRIVIIEAEKQVIGILVDSVAEVVYLRGSEIDNAPNVGTEESAKFIQGVSNRDGELLILVDLDKLLSDEEWIEL TQI
Sequences:
>Translated_163_residues MTSSNSVAVAAGTEDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLAS ADVNDSTRIVIIEAEKQVIGILVDSVAEVVYLRGSEIDNAPNVGTEESAKFIQGVSNRDGELLILVDLDKLLSDEEWIEL TQI >Mature_162_residues TSSNSVAVAAGTEDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLASA DVNDSTRIVIIEAEKQVIGILVDSVAEVVYLRGSEIDNAPNVGTEESAKFIQGVSNRDGELLILVDLDKLLSDEEWIELT QI
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=157, Percent_Identity=32.484076433121, Blast_Score=101, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17773; Mature: 17642
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSNSVAVAAGTEDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGII CCCCCCEEEEECCCHHEEEEEEEEECCCEECEEHHHHHHHHHHHHCCCCCCCCEEEEEEE NLRGNVVTVIDTRSRFGLASADVNDSTRIVIIEAEKQVIGILVDSVAEVVYLRGSEIDNA ECCCCEEEEEECCCCCCEEECCCCCCEEEEEEECCCCEEHHHHHHHHHEEEECCCCCCCC PNVGTEESAKFIQGVSNRDGELLILVDLDKLLSDEEWIELTQI CCCCCHHHHHHHHCCCCCCCCEEEEEECHHHHCCCCCEEEECC >Mature Secondary Structure TSSNSVAVAAGTEDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGII CCCCCEEEEECCCHHEEEEEEEEECCCEECEEHHHHHHHHHHHHCCCCCCCCEEEEEEE NLRGNVVTVIDTRSRFGLASADVNDSTRIVIIEAEKQVIGILVDSVAEVVYLRGSEIDNA ECCCCEEEEEECCCCCCEEECCCCCCEEEEEEECCCCEEHHHHHHHHHEEEECCCCCCCC PNVGTEESAKFIQGVSNRDGELLILVDLDKLLSDEEWIELTQI CCCCCHHHHHHHHCCCCCCCCEEEEEECHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7623670; 11481430 [H]