| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961149
Identifier: 157961149
GI number: 157961149
Start: 1613671
End: 1614243
Strand: Reverse
Name: 157961149
Synonym: Spea_1321
Alternate gene names: NA
Gene position: 1614243-1613671 (Counterclockwise)
Preceding gene: 157961150
Following gene: 157961144
Centisome position: 31.2
GC content: 43.11
Gene sequence:
>573_bases ATGTTACGCAACTTATTCTTAGTGACCTTCATCATTATCATGACAGGCTGTGCCAGTCCGCAGACCAATACCGTGCAAGG GAAAAAATTATTGATTGTCGCCGGAAACGGACTCAACACCACCTATGAAGATAGCCCTGCCGCGAATGGTTTTCTTTTTG AAGTAGGTGAAACTTTTGCCACCGACCTTGGCAATAAACTGGAGGAGTTTGGATTTGAATCTTATCTGTTTGTCAGTAAG GATGCGGCGACCTATAAACAGCAATATCAACGCGCAGTAAACCGTTTAATGACTGACGAAACCATAGATGGTGTCGCCGA AATCAAGGTGCTGCATACCAAAGATGCAAAGGTCAATGAAATCGCAATTTATGCGACTTACTTTACTACAGACCTAATGA CTAAAGGCTGCGATCTACGTACTTCAAAAAACTGTTACAGCGTTAAAACACTCGACAAAATCGGTGACAGAAAACATTTA GTCGTGGATCAAGCAACACAAAGCTTTAACGACACCCCAGTGTCTGAAATGGTCACCGACACAGCGCTATTTATCTACCG CTCTGAGCTGTAA
Upstream 100 bases:
>100_bases TATAGTTATCACAGCTAGTTTTATTAGCTGACCTCGAATTATAATCGCGCCGATTTCGTATTTTAAAAATACCAACCTCA ACCCCATTACGAGTACAAAT
Downstream 100 bases:
>100_bases CCTAACTGCAATTCTAGCCACATAGCTAAAAGTGCTTGTCTTGCGCTAGGCTTCTAAAGAGGCCTAGCCAAAGCGCTCAT CAGCTACAGTATTTCAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLRNLFLVTFIIIMTGCASPQTNTVQGKKLLIVAGNGLNTTYEDSPAANGFLFEVGETFATDLGNKLEEFGFESYLFVSK DAATYKQQYQRAVNRLMTDETIDGVAEIKVLHTKDAKVNEIAIYATYFTTDLMTKGCDLRTSKNCYSVKTLDKIGDRKHL VVDQATQSFNDTPVSEMVTDTALFIYRSEL
Sequences:
>Translated_190_residues MLRNLFLVTFIIIMTGCASPQTNTVQGKKLLIVAGNGLNTTYEDSPAANGFLFEVGETFATDLGNKLEEFGFESYLFVSK DAATYKQQYQRAVNRLMTDETIDGVAEIKVLHTKDAKVNEIAIYATYFTTDLMTKGCDLRTSKNCYSVKTLDKIGDRKHL VVDQATQSFNDTPVSEMVTDTALFIYRSEL >Mature_190_residues MLRNLFLVTFIIIMTGCASPQTNTVQGKKLLIVAGNGLNTTYEDSPAANGFLFEVGETFATDLGNKLEEFGFESYLFVSK DAATYKQQYQRAVNRLMTDETIDGVAEIKVLHTKDAKVNEIAIYATYFTTDLMTKGCDLRTSKNCYSVKTLDKIGDRKHL VVDQATQSFNDTPVSEMVTDTALFIYRSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21218; Mature: 21218
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNLFLVTFIIIMTGCASPQTNTVQGKKLLIVAGNGLNTTYEDSPAANGFLFEVGETFA CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHH TDLGNKLEEFGFESYLFVSKDAATYKQQYQRAVNRLMTDETIDGVAEIKVLHTKDAKVNE HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCCCE IAIYATYFTTDLMTKGCDLRTSKNCYSVKTLDKIGDRKHLVVDQATQSFNDTPVSEMVTD EEEEEEEHHHHHHHCCCCCCCCCCEEEEHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHH TALFIYRSEL HEEEEEEECC >Mature Secondary Structure MLRNLFLVTFIIIMTGCASPQTNTVQGKKLLIVAGNGLNTTYEDSPAANGFLFEVGETFA CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHH TDLGNKLEEFGFESYLFVSKDAATYKQQYQRAVNRLMTDETIDGVAEIKVLHTKDAKVNE HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCCCE IAIYATYFTTDLMTKGCDLRTSKNCYSVKTLDKIGDRKHLVVDQATQSFNDTPVSEMVTD EEEEEEEHHHHHHHCCCCCCCCCCEEEEHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHH TALFIYRSEL HEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA