Click here to switch to the map view.

The map label for this gene is mcpB [H]

Identifier: 157961150

GI number: 157961150

Start: 1614466

End: 1616469

Strand: Reverse

Name: mcpB [H]

Synonym: Spea_1322

Alternate gene names: 157961150

Gene position: 1616469-1614466 (Counterclockwise)

Preceding gene: 157961152

Following gene: 157961149

Centisome position: 31.24

GC content: 47.9

Gene sequence:

>2004_bases
ATGAATTATAAAAATTGGCCAATAGCCAAACAAATAGGCTTACTCGCTTTACTACTAACCGTAGTCGTTTTTGGTTTTCT
CGGTTGCGTCTCCTACTTAACCGCCTCCGATGTACTAAGAGATAAAGGGATCAGCGCTATGAAAGCGCAAACGGAAGGCA
CTGCAGACTTGATTGAGCTGCAATATGAAAGCCTACTTTCACTCGCCAAACGTAATGCCGATGTATTTCGCTCTATGTAC
CCAGGTGACTTCTATAAACCGAATAAAACCGTCAGAGTGATGGGAGTAGAGACTCCAGCACTGAGGCATAAAAAAGAGCA
GATCAACGCATCAAAAAGTAAGGTCGATCGTTACTCCAACCTTACTGGCGGCAACGCGACCGTATTTGTCCGAGACGGTG
ATAACTTTATCCGCATCTCCACCTCGCTTAAGAAATCAGACGGCAAACGTGCTCTTGGCACTAACTTAGATAAAGATCAC
CCAGCCTACAGCGCCGCCTTGAAAGGTCAGAGCTACGAAGGTTACGCCCAGCTATTTGGCAAAGATTACATGACCATTTA
CCGCCCGATTAAAAACAGTGGCGGCGAAACGATCGGCATCTTGTATATCGGGTTCGATATCAGTAGCTCGTTAATTCAAT
TACGCGAGGCTATTAATAAACTACAACTGGAAGAATCTGGCAGTTACCTGCTGGTTCATAAGTCAGATTTAACGGTTATT
TCTCACCCTCAGCATCAACCCGGTGAAAAGGTCTCAACTGAACTGCTCGGCGGCCTCAGTATAGAACAAGCGCTAACTCA
CCAAGGCTCATGGGAATACACCAACAACCATGGCGCTAAGGCATACGCCTACACCATTAATATTCCGGGTTGGGATTGGT
CGCTAATCGGTCAAGTCGATGCCGCAGAGCTTAATGAAGAGAGCGTCAGCCTACTTAATATCAACATGGCCGTCTCTGTG
ATTGGCATGATAGTGATAACGTTACTGCTATCGCAAGTATTGATAAGAGCACTTAAACCTCTAGGCTGCTTGCAAGGTCA
ATTAGAGAAGTTAGGAGCTGGCGATCTTTCTCAAACCTTTACCGCAATCAATACCAATAGCAAAAACGAGGTCGATCTGA
TCACCAATAGCACCTCTAAGATGGCAACCAACTTAAGAGAGCTGATCCTAGCACTACAGCAATCTGTTACCGCGCTGCAG
GCTCACTCTAACCATACCCAAGAAACTGCCCGTCTTAATGGTGAAGAGGCGCAGTCGCTAATGGCACAAACAGATCAGAT
AGCCACTGCCATCGAGGAGATGTCAGCTTCGGTACGTGACGTAGCAAACCATGCCAGTGAAGGCGCGACAATGAGCCAAC
GGGTGGACGATGCGGCTAAAGGAGGCCAGACAAACTTAAACGATCTGGTTAATGGCCTACAAAGCTTGAGTAACCAGTTA
ACCGACAGCCACAATAGTGTAGAGATCGTCAATAAAGAGAGCCAAGCAATTAGTAAGATAACCGAGGTGATTAACAGCAT
TGCCGAGCAAACCAATCTTCTTGCGCTAAATGCGGCAATTGAAGCCGCTAGAGCAGGCGAGCAAGGCCGTGGCTTTGCCG
TAGTCGCCGATGAGGTGCGCACTCTCGCCCAACGCACGCAAACCTCTATCGCCGAGATCTCTCAAACCATCACTCAGCTG
CAATCCCAAGTAAAGTTCACTACTGAGCAGATGAATCAAAGTAATGAACTGGGGGATGTATCTGCGGCGCAAGGCAACGA
AGCGATTGCTCAGCTGCTAGAGATCAACACCAGTATCGCAGAGCTCGCAGCAACCTCAACCAGTATCGCCAGTGCCACTG
AGCAGCAAAGCGCCGTCGCGGAAGAGATCACCCGTAATCTGCATCAAATCACCGAGCTTGCAAGAGACGGTGAGCAACGT
GCTGGAGAGAGTGTCGATTCGGCAGAAAGCCTAGCGACAATAGCTAACGAGATTAATGCTAAGATCAGCGTGTTTAAGGC
GTAA

Upstream 100 bases:

>100_bases
TCTTTCTAACAAACTTAAGCTCACATATTAGACATTCATCAACCAATTTCTGATTAATATCAATTACATTATAAGCACCA
CTAGCAAGTTTGAATTAATA

Downstream 100 bases:

>100_bases
TCCTTCGCCTAAACCACCCTATCTATAGATAAGTCCATAAAGGCAACAGTGAGATGACTGTTGCCTTTTATATTTACAAT
AAGACCCGAAAATTTAACTA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MNYKNWPIAKQIGLLALLLTVVVFGFLGCVSYLTASDVLRDKGISAMKAQTEGTADLIELQYESLLSLAKRNADVFRSMY
PGDFYKPNKTVRVMGVETPALRHKKEQINASKSKVDRYSNLTGGNATVFVRDGDNFIRISTSLKKSDGKRALGTNLDKDH
PAYSAALKGQSYEGYAQLFGKDYMTIYRPIKNSGGETIGILYIGFDISSSLIQLREAINKLQLEESGSYLLVHKSDLTVI
SHPQHQPGEKVSTELLGGLSIEQALTHQGSWEYTNNHGAKAYAYTINIPGWDWSLIGQVDAAELNEESVSLLNINMAVSV
IGMIVITLLLSQVLIRALKPLGCLQGQLEKLGAGDLSQTFTAINTNSKNEVDLITNSTSKMATNLRELILALQQSVTALQ
AHSNHTQETARLNGEEAQSLMAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQTNLNDLVNGLQSLSNQL
TDSHNSVEIVNKESQAISKITEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSIAEISQTITQL
QSQVKFTTEQMNQSNELGDVSAAQGNEAIAQLLEINTSIAELAATSTSIASATEQQSAVAEEITRNLHQITELARDGEQR
AGESVDSAESLATIANEINAKISVFKA

Sequences:

>Translated_667_residues
MNYKNWPIAKQIGLLALLLTVVVFGFLGCVSYLTASDVLRDKGISAMKAQTEGTADLIELQYESLLSLAKRNADVFRSMY
PGDFYKPNKTVRVMGVETPALRHKKEQINASKSKVDRYSNLTGGNATVFVRDGDNFIRISTSLKKSDGKRALGTNLDKDH
PAYSAALKGQSYEGYAQLFGKDYMTIYRPIKNSGGETIGILYIGFDISSSLIQLREAINKLQLEESGSYLLVHKSDLTVI
SHPQHQPGEKVSTELLGGLSIEQALTHQGSWEYTNNHGAKAYAYTINIPGWDWSLIGQVDAAELNEESVSLLNINMAVSV
IGMIVITLLLSQVLIRALKPLGCLQGQLEKLGAGDLSQTFTAINTNSKNEVDLITNSTSKMATNLRELILALQQSVTALQ
AHSNHTQETARLNGEEAQSLMAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQTNLNDLVNGLQSLSNQL
TDSHNSVEIVNKESQAISKITEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSIAEISQTITQL
QSQVKFTTEQMNQSNELGDVSAAQGNEAIAQLLEINTSIAELAATSTSIASATEQQSAVAEEITRNLHQITELARDGEQR
AGESVDSAESLATIANEINAKISVFKA
>Mature_667_residues
MNYKNWPIAKQIGLLALLLTVVVFGFLGCVSYLTASDVLRDKGISAMKAQTEGTADLIELQYESLLSLAKRNADVFRSMY
PGDFYKPNKTVRVMGVETPALRHKKEQINASKSKVDRYSNLTGGNATVFVRDGDNFIRISTSLKKSDGKRALGTNLDKDH
PAYSAALKGQSYEGYAQLFGKDYMTIYRPIKNSGGETIGILYIGFDISSSLIQLREAINKLQLEESGSYLLVHKSDLTVI
SHPQHQPGEKVSTELLGGLSIEQALTHQGSWEYTNNHGAKAYAYTINIPGWDWSLIGQVDAAELNEESVSLLNINMAVSV
IGMIVITLLLSQVLIRALKPLGCLQGQLEKLGAGDLSQTFTAINTNSKNEVDLITNSTSKMATNLRELILALQQSVTALQ
AHSNHTQETARLNGEEAQSLMAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQTNLNDLVNGLQSLSNQL
TDSHNSVEIVNKESQAISKITEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSIAEISQTITQL
QSQVKFTTEQMNQSNELGDVSAAQGNEAIAQLLEINTSIAELAATSTSIASATEQQSAVAEEITRNLHQITELARDGEQR
AGESVDSAESLATIANEINAKISVFKA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=425, Percent_Identity=26.1176470588235, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1787690, Length=370, Percent_Identity=28.3783783783784, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI1788195, Length=287, Percent_Identity=31.3588850174216, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI2367378, Length=306, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI1789453, Length=300, Percent_Identity=27.6666666666667, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72080; Mature: 72080

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKNWPIAKQIGLLALLLTVVVFGFLGCVSYLTASDVLRDKGISAMKAQTEGTADLIEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH
QYESLLSLAKRNADVFRSMYPGDFYKPNKTVRVMGVETPALRHKKEQINASKSKVDRYSN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHC
LTGGNATVFVRDGDNFIRISTSLKKSDGKRALGTNLDKDHPAYSAALKGQSYEGYAQLFG
CCCCCEEEEEECCCCEEEEEECHHHCCCCHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHC
KDYMTIYRPIKNSGGETIGILYIGFDISSSLIQLREAINKLQLEESGSYLLVHKSDLTVI
CHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEE
SHPQHQPGEKVSTELLGGLSIEQALTHQGSWEYTNNHGAKAYAYTINIPGWDWSLIGQVD
ECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCEEEEEEEECCCCCCHHCCCCC
AAELNEESVSLLNINMAVSVIGMIVITLLLSQVLIRALKPLGCLQGQLEKLGAGDLSQTF
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHH
TAINTNSKNEVDLITNSTSKMATNLRELILALQQSVTALQAHSNHTQETARLNGEEAQSL
HEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH
MAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQTNLNDLVNGLQSLSNQL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TDSHNSVEIVNKESQAISKITEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHH
TLAQRTQTSIAEISQTITQLQSQVKFTTEQMNQSNELGDVSAAQGNEAIAQLLEINTSIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ELAATSTSIASATEQQSAVAEEITRNLHQITELARDGEQRAGESVDSAESLATIANEINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCC
KISVFKA
CEEEEEC
>Mature Secondary Structure
MNYKNWPIAKQIGLLALLLTVVVFGFLGCVSYLTASDVLRDKGISAMKAQTEGTADLIEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH
QYESLLSLAKRNADVFRSMYPGDFYKPNKTVRVMGVETPALRHKKEQINASKSKVDRYSN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHC
LTGGNATVFVRDGDNFIRISTSLKKSDGKRALGTNLDKDHPAYSAALKGQSYEGYAQLFG
CCCCCEEEEEECCCCEEEEEECHHHCCCCHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHC
KDYMTIYRPIKNSGGETIGILYIGFDISSSLIQLREAINKLQLEESGSYLLVHKSDLTVI
CHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEE
SHPQHQPGEKVSTELLGGLSIEQALTHQGSWEYTNNHGAKAYAYTINIPGWDWSLIGQVD
ECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCEEEEEEEECCCCCCHHCCCCC
AAELNEESVSLLNINMAVSVIGMIVITLLLSQVLIRALKPLGCLQGQLEKLGAGDLSQTF
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHH
TAINTNSKNEVDLITNSTSKMATNLRELILALQQSVTALQAHSNHTQETARLNGEEAQSL
HEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH
MAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQTNLNDLVNGLQSLSNQL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TDSHNSVEIVNKESQAISKITEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHH
TLAQRTQTSIAEISQTITQLQSQVKFTTEQMNQSNELGDVSAAQGNEAIAQLLEINTSIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ELAATSTSIASATEQQSAVAEEITRNLHQITELARDGEQRAGESVDSAESLATIANEINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCC
KISVFKA
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]