| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961138
Identifier: 157961138
GI number: 157961138
Start: 1595153
End: 1595872
Strand: Reverse
Name: 157961138
Synonym: Spea_1310
Alternate gene names: NA
Gene position: 1595872-1595153 (Counterclockwise)
Preceding gene: 157961139
Following gene: 157961129
Centisome position: 30.84
GC content: 40.0
Gene sequence:
>720_bases ATGCAAATAAATATGAGTAGAACGATAAAATGGTCAGCTGGCCTAATATTGGCTGCATTAAACCTAAATGTAAATGCAGC ACCAGAGAGCGAAGTTGTTATCTCTGACAGTTTTACAGCTGCGGCGTTAAAGCATGGATTCAAACCAGAATTGCTAAATC GTTTATGCGAGCCTCTGCCTGATATTGTCAGTGTTACTTGTCACCATTCAGGCGAAGATGGGCCATTTGAAAACTTGATT GTGCAATATCGTTACAATAGTCGTGTGACTGAACATGAAATGTATAAGCATACAGAGTTAAACGACATTCGAATCGATTT AAAACATAAGCAAATTGACTTCTGCAGTGGCCATCAAATAACCACGCCAGACCGTATAAGCGTAAACAGAATTGAAGGTA CCAGCCACTCTTATATTGAAACCGGCGCCATGAAAGGCTCTGTCAATCGCACAGACAGAAGATTTCAACAACAAAGAGAC ACTGAATATGAGTTAACTCACACCTCTGAATTCGCCTACAAATACCAAGATCTAAAACAAGCCATTGACGCAATAAAACA TTACCAAAAAATGGTTAGCGACAATGACTATGTCGTAGCCTATAAAGAAGATCAGGTTATTGAGCCCGTAGAAATTATGC AAGGTGCCAGTTTTACGTTTCCGATGAGTGAACCTCTGAAGCAACGACTCATAGATGTGATGCAACAGAGCGAAAAGTAA
Upstream 100 bases:
>100_bases TTTACTTGCAGTGACATGATTCACTGAATTTTTATCTCTTCTATAGGAAAATAAACGTCAAAATCACAAAAGCCATCTAG CAAAAGATAAAATAAATTAC
Downstream 100 bases:
>100_bases TCTGAACGGCTACAACAAAAAAGGAACCCTGAGGTTCCTTTTTTAAGCTATTTTGCTTATTTCAATCAAGAACAAGAATT AATCTTTATTCTTATCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQINMSRTIKWSAGLILAALNLNVNAAPESEVVISDSFTAAALKHGFKPELLNRLCEPLPDIVSVTCHHSGEDGPFENLI VQYRYNSRVTEHEMYKHTELNDIRIDLKHKQIDFCSGHQITTPDRISVNRIEGTSHSYIETGAMKGSVNRTDRRFQQQRD TEYELTHTSEFAYKYQDLKQAIDAIKHYQKMVSDNDYVVAYKEDQVIEPVEIMQGASFTFPMSEPLKQRLIDVMQQSEK
Sequences:
>Translated_239_residues MQINMSRTIKWSAGLILAALNLNVNAAPESEVVISDSFTAAALKHGFKPELLNRLCEPLPDIVSVTCHHSGEDGPFENLI VQYRYNSRVTEHEMYKHTELNDIRIDLKHKQIDFCSGHQITTPDRISVNRIEGTSHSYIETGAMKGSVNRTDRRFQQQRD TEYELTHTSEFAYKYQDLKQAIDAIKHYQKMVSDNDYVVAYKEDQVIEPVEIMQGASFTFPMSEPLKQRLIDVMQQSEK >Mature_239_residues MQINMSRTIKWSAGLILAALNLNVNAAPESEVVISDSFTAAALKHGFKPELLNRLCEPLPDIVSVTCHHSGEDGPFENLI VQYRYNSRVTEHEMYKHTELNDIRIDLKHKQIDFCSGHQITTPDRISVNRIEGTSHSYIETGAMKGSVNRTDRRFQQQRD TEYELTHTSEFAYKYQDLKQAIDAIKHYQKMVSDNDYVVAYKEDQVIEPVEIMQGASFTFPMSEPLKQRLIDVMQQSEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27469; Mature: 27469
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQINMSRTIKWSAGLILAALNLNVNAAPESEVVISDSFTAAALKHGFKPELLNRLCEPLP CCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHCCH DIVSVTCHHSGEDGPFENLIVQYRYNSRVTEHEMYKHTELNDIRIDLKHKQIDFCSGHQI HHHEEEECCCCCCCCHHHEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCEEEECCCCCC TTPDRISVNRIEGTSHSYIETGAMKGSVNRTDRRFQQQRDTEYELTHTSEFAYKYQDLKQ CCCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH AIDAIKHYQKMVSDNDYVVAYKEDQVIEPVEIMQGASFTFPMSEPLKQRLIDVMQQSEK HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQINMSRTIKWSAGLILAALNLNVNAAPESEVVISDSFTAAALKHGFKPELLNRLCEPLP CCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHCCH DIVSVTCHHSGEDGPFENLIVQYRYNSRVTEHEMYKHTELNDIRIDLKHKQIDFCSGHQI HHHEEEECCCCCCCCHHHEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCEEEECCCCCC TTPDRISVNRIEGTSHSYIETGAMKGSVNRTDRRFQQQRDTEYELTHTSEFAYKYQDLKQ CCCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH AIDAIKHYQKMVSDNDYVVAYKEDQVIEPVEIMQGASFTFPMSEPLKQRLIDVMQQSEK HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA