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The map label for this gene is yfjD [C]

Identifier: 157961129

GI number: 157961129

Start: 1584981

End: 1586051

Strand: Reverse

Name: yfjD [C]

Synonym: Spea_1301

Alternate gene names: 157961129

Gene position: 1586051-1584981 (Counterclockwise)

Preceding gene: 157961138

Following gene: 157961128

Centisome position: 30.65

GC content: 42.58

Gene sequence:

>1071_bases
ATGATAACCCTTATCATTATAATATTTGTCGCGATAACCGTCTCTTTTCTTTGTAGTGTGTTTGAAGCCGTATTGCTTTC
AGTGACACCAAGTTACATAGCCTCATTAACTAAAACCAATCCAGGTGCAGCTAATAGATTACGTAAGCAAAAAGAGAATG
TTGAATCTCCACTCGTTTCAATCCTGACCTTAAACACTATCGCTCACACCGTCGGTGCTGCAGTTGCTGGTGCGCAAGCG
GCTAAGGTATTTGGCGATGAGATGTTAGGCGTATTTTCTGGTGTTCTTACCTTCTTAATTCTCTTCTTCTCAGAGATCAT
CCCTAAGACCCTAGGTGCAAACTACTGGCGTTCACTCGCTCCAACTGTATCTATCGCCTTGGTTTGGATGGAACGAAGTA
CCTTGCCTCTTATCTGGATGTCTAATCAAGTTACTAAACTGATGGGCAAAGGCGATGAAGGTCAGTACATTCGTCAAGAG
ATGAGTGCGATGGCAGAGATTGGTCGTGCATCTGGAGAGCTTGATGAGCAAGAGTCAAAGATTTTGACTCAGATGCTGTC
GGTTAAAGAAATGCCTGTAACCGCTATCATGACGCCAAGAACAGTATTGTTTAGACTGCCTACCGACTTAACTCAGGATC
AGTTTACACGTCAGTACATGGCAAAACCTTTTACTCGAATTCCTGTCTATGACCAAGAGCCAGATAACATTATTGGTTAC
GTGAATAGAAACGATATTTTGCTTGCTGAGCGTAACACTCCAAAAGAGTCGATCGCCGTGCTTAAGAAGAGCCTATTGGT
GATCCCAGAGACCGCCAAGATTTTGCCTCTATTTGAGCTAATGATTAAGCGAAATACTAAGATTGCTATGGTAGTAGATG
AATACGGTTCTCACGAAGGTATTGTTACCTTAGAAGATATCGTTGAATCATTACTCGGCCTTGAGATTGTCGATTCAAAC
GACCCTGTAACAGACATGCAGCAATTTGCACGTAAGTTATGGAGTCGCCGCATGAAAGACAAAGGCATAGTATTATCTGA
TGATGGCGATTTCGAAAAAGAAGAGCGCTAA

Upstream 100 bases:

>100_bases
ACAAATATTAGCCAGTGGGCTATCACCAAAGTTAAAAAGCTGTGCTAGAATCCGCGCAGACTACTTTTGGTCTGCCATTT
GGAGGTGTAATTTCACCTTT

Downstream 100 bases:

>100_bases
TATCTGTTAACCAAATTGTTGGTTACTAAAAAGGGAGCTTGGCTCCCTTTTTTAATATCTAAACTCTATCGCTAGCAATA
TTCGGCAGTTATACCAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPGAANRLRKQKENVESPLVSILTLNTIAHTVGAAVAGAQA
AKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLAPTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQE
MSAMAEIGRASGELDEQESKILTQMLSVKEMPVTAIMTPRTVLFRLPTDLTQDQFTRQYMAKPFTRIPVYDQEPDNIIGY
VNRNDILLAERNTPKESIAVLKKSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSHEGIVTLEDIVESLLGLEIVDSN
DPVTDMQQFARKLWSRRMKDKGIVLSDDGDFEKEER

Sequences:

>Translated_356_residues
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPGAANRLRKQKENVESPLVSILTLNTIAHTVGAAVAGAQA
AKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLAPTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQE
MSAMAEIGRASGELDEQESKILTQMLSVKEMPVTAIMTPRTVLFRLPTDLTQDQFTRQYMAKPFTRIPVYDQEPDNIIGY
VNRNDILLAERNTPKESIAVLKKSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSHEGIVTLEDIVESLLGLEIVDSN
DPVTDMQQFARKLWSRRMKDKGIVLSDDGDFEKEER
>Mature_356_residues
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPGAANRLRKQKENVESPLVSILTLNTIAHTVGAAVAGAQA
AKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLAPTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQE
MSAMAEIGRASGELDEQESKILTQMLSVKEMPVTAIMTPRTVLFRLPTDLTQDQFTRQYMAKPFTRIPVYDQEPDNIIGY
VNRNDILLAERNTPKESIAVLKKSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSHEGIVTLEDIVESLLGLEIVDSN
DPVTDMQQFARKLWSRRMKDKGIVLSDDGDFEKEER

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=264, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=6e-18,
Organism=Escherichia coli, GI145693175, Length=306, Percent_Identity=25.8169934640523, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790664, Length=338, Percent_Identity=23.3727810650888, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082033, Length=195, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788119, Length=192, Percent_Identity=24.4791666666667, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786879, Length=174, Percent_Identity=26.4367816091954, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=250, Percent_Identity=26.8, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 39751; Mature: 39751

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPGAANRLRKQKENVESPLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ILTLNTIAHTVGAAVAGAQAAKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
PTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQEMSAMAEIGRASGELDEQESK
HHHHEEEEEEECCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
ILTQMLSVKEMPVTAIMTPRTVLFRLPTDLTQDQFTRQYMAKPFTRIPVYDQEPDNIIGY
HHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
VNRNDILLAERNTPKESIAVLKKSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSHEG
ECCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
IVTLEDIVESLLGLEIVDSNDPVTDMQQFARKLWSRRMKDKGIVLSDDGDFEKEER
CEEHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPGAANRLRKQKENVESPLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ILTLNTIAHTVGAAVAGAQAAKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
PTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQEMSAMAEIGRASGELDEQESK
HHHHEEEEEEECCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
ILTQMLSVKEMPVTAIMTPRTVLFRLPTDLTQDQFTRQYMAKPFTRIPVYDQEPDNIIGY
HHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
VNRNDILLAERNTPKESIAVLKKSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSHEG
ECCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
IVTLEDIVESLLGLEIVDSNDPVTDMQQFARKLWSRRMKDKGIVLSDDGDFEKEER
CEEHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]