Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yfjZ [H]

Identifier: 157961085

GI number: 157961085

Start: 1529279

End: 1529620

Strand: Reverse

Name: yfjZ [H]

Synonym: Spea_1257

Alternate gene names: 157961085

Gene position: 1529620-1529279 (Counterclockwise)

Preceding gene: 157961086

Following gene: 157961084

Centisome position: 29.56

GC content: 50.29

Gene sequence:

>342_bases
ATGACAACGATTCAACCATCTATGCCCTATCAATGGGGTTTACAGCGTAATATTACGCCGCGATTTGGTGCGCGGCTTAT
TCTGCAAGGCAGTCGCTTAGACTTCCTGTGGGATCGCTCAGGCTTTGTCGGCAGCTTTCCCCCAGCGCAAGGTCAGCTAC
TCAACGACGCCTTCTCAGAGATCATTAAGCAACTTGAGAACCAAGTATCACTGGGTCACCTCGATGCGCGTCAGCAACGC
AGCATAACCTTACAGCACGCTGGCTTTACCTGTGAGGCCGATACACTCGGTAGTCACGGATATCTCTATATTGCGATCTA
TCCAACCACAGCTAACCATTAA

Upstream 100 bases:

>100_bases
GTTAAACATCTGCCATCACCACTTATCTGTTGTTCTATAGCGTTACCTTACATCAACCAGCAACACATAAACTCAAGCAA
GTATTAAAAGGAGTTTCAGC

Downstream 100 bases:

>100_bases
GGCAATCAACGCTACGCTGACAACAGCCCCCCCCCCCTCAAGACTCATCATCGCACGCTAACTTTAGCGGAAACATTCAA
CACTGCTAGCCCTTTAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTTIQPSMPYQWGLQRNITPRFGARLILQGSRLDFLWDRSGFVGSFPPAQGQLLNDAFSEIIKQLENQVSLGHLDARQQR
SITLQHAGFTCEADTLGSHGYLYIAIYPTTANH

Sequences:

>Translated_113_residues
MTTIQPSMPYQWGLQRNITPRFGARLILQGSRLDFLWDRSGFVGSFPPAQGQLLNDAFSEIIKQLENQVSLGHLDARQQR
SITLQHAGFTCEADTLGSHGYLYIAIYPTTANH
>Mature_112_residues
TTIQPSMPYQWGLQRNITPRFGARLILQGSRLDFLWDRSGFVGSFPPAQGQLLNDAFSEIIKQLENQVSLGHLDARQQRS
ITLQHAGFTCEADTLGSHGYLYIAIYPTTANH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafW, yagB and yeeU [H]

Homologues:

Organism=Escherichia coli, GI1788998, Length=98, Percent_Identity=52.0408163265306, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI1786440, Length=97, Percent_Identity=48.4536082474227, Blast_Score=100, Evalue=3e-23,
Organism=Escherichia coli, GI1788314, Length=98, Percent_Identity=47.9591836734694, Blast_Score=99, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009320 [H]

Pfam domain/function: PF06154 YagB_YeeU_YfjZ [H]

EC number: NA

Molecular weight: Translated: 12693; Mature: 12561

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIQPSMPYQWGLQRNITPRFGARLILQGSRLDFLWDRSGFVGSFPPAQGQLLNDAFSE
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
IIKQLENQVSLGHLDARQQRSITLQHAGFTCEADTLGSHGYLYIAIYPTTANH
HHHHHHHHCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
TTIQPSMPYQWGLQRNITPRFGARLILQGSRLDFLWDRSGFVGSFPPAQGQLLNDAFSE
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
IIKQLENQVSLGHLDARQQRSITLQHAGFTCEADTLGSHGYLYIAIYPTTANH
HHHHHHHHCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]