| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961084
Identifier: 157961084
GI number: 157961084
Start: 1528687
End: 1529100
Strand: Reverse
Name: 157961084
Synonym: Spea_1256
Alternate gene names: NA
Gene position: 1529100-1528687 (Counterclockwise)
Preceding gene: 157961085
Following gene: 157961083
Centisome position: 29.55
GC content: 44.69
Gene sequence:
>414_bases ATGTCTATTCAACTCGACAAGAACCAAATACCTAAAATGTCTCGCGCATTCTATCAATTGCTTGAACAACAGCTTCAAAG CCTCCCCCCCAAAGAGGCTAATGCCATCACGCTGAACTTTCGCGATCCCGACTACAGCGCCGAAAACGGCGGCTATCAGC CGGTAGAGGTGAGATTAGAGAAACAGCAAGATCTTTGGCGACTCGTGTACGTCACTGATTTTGCTTATCACGGCCATCCC TATCCAGAGCTAGTTAAGGACATTGATATCTGCTTTAACTCCAAGCAAGTGTATAGCTTGTTCAGTGGTTGGATTGGTGA ACTAGAATCTCGAGAGTTGGTCTCGATGTTTAGCGAAAATTTTATCGCTTATCAAGAGATGGGCGCTTATACCGTTTACA TCCAATTAGATTAG
Upstream 100 bases:
>100_bases AACACTGCTAGCCCTTTAGCGACATCCGTAACCGCTTCAATATCACCAAGCCTTGTGCTGGTGGCAGCCCCTTACTATCT AATTCTTTAAGGAATAACTC
Downstream 100 bases:
>100_bases TACTGCAGTCAATGCGTTAGGTTCCCGTTTTACCAAAACGGGAACCTGCAAACCTAGGCTACATGGGGGGGCCGCTATCC CTGAACCTCTTAGGGGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSIQLDKNQIPKMSRAFYQLLEQQLQSLPPKEANAITLNFRDPDYSAENGGYQPVEVRLEKQQDLWRLVYVTDFAYHGHP YPELVKDIDICFNSKQVYSLFSGWIGELESRELVSMFSENFIAYQEMGAYTVYIQLD
Sequences:
>Translated_137_residues MSIQLDKNQIPKMSRAFYQLLEQQLQSLPPKEANAITLNFRDPDYSAENGGYQPVEVRLEKQQDLWRLVYVTDFAYHGHP YPELVKDIDICFNSKQVYSLFSGWIGELESRELVSMFSENFIAYQEMGAYTVYIQLD >Mature_136_residues SIQLDKNQIPKMSRAFYQLLEQQLQSLPPKEANAITLNFRDPDYSAENGGYQPVEVRLEKQQDLWRLVYVTDFAYHGHPY PELVKDIDICFNSKQVYSLFSGWIGELESRELVSMFSENFIAYQEMGAYTVYIQLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16044; Mature: 15913
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQLDKNQIPKMSRAFYQLLEQQLQSLPPKEANAITLNFRDPDYSAENGGYQPVEVRLE CCEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE KQQDLWRLVYVTDFAYHGHPYPELVKDIDICFNSKQVYSLFSGWIGELESRELVSMFSEN CCCCCEEEHEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHC FIAYQEMGAYTVYIQLD CHHEECCCEEEEEEEEC >Mature Secondary Structure SIQLDKNQIPKMSRAFYQLLEQQLQSLPPKEANAITLNFRDPDYSAENGGYQPVEVRLE CEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE KQQDLWRLVYVTDFAYHGHPYPELVKDIDICFNSKQVYSLFSGWIGELESRELVSMFSEN CCCCCEEEHEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHC FIAYQEMGAYTVYIQLD CHHEECCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA