| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961072
Identifier: 157961072
GI number: 157961072
Start: 1518035
End: 1518595
Strand: Reverse
Name: 157961072
Synonym: Spea_1244
Alternate gene names: NA
Gene position: 1518595-1518035 (Counterclockwise)
Preceding gene: 157961077
Following gene: 157961069
Centisome position: 29.35
GC content: 42.07
Gene sequence:
>561_bases ATGAGAAACCTAGAACTATTTAGCACAGCTTCAATCGATCACTTAATGTGGTCACAAAAAGAGTATTCAGCAAACCTCGA CTCCCCAGCCCTGTCCATTTTTACTGATTTTGACCATTCTCAACCTATGGTTATAGACTCCTCTGCTAGCGCTGTAGATA CCGCTGACATAATGGTGAAGACCCATGCATTTATGCGACTGGTCGTCGATAAAAGTAACCGTTTTCTGGGCGTTATCACT CAATATGAATTATCCCATAGTAAGATGATGAAATTGGCGACCAAAAACTCAGGGCATATTTCCGATCTTCAAGTGACAGA TATGATGGTGCCACGAGAAGACTTAATGGCATTAGACTACCATCAAGTGACGACAGCCAACGTAAGCGATGTTGTACGGG CGTTACAAGAAAATGGCTTGCATCACATGTTAGTCATCGATCATGAACTACACCATATTAGAGGCTTAATTGCCGCTAGT GATGTAGCAAGAAAGCTTAATATCCCGATTGATATCCAGCAGCCGCCATCATTTATACAGATTTTCAAGGCCACGAGATA A
Upstream 100 bases:
>100_bases TATTGACCTGTTACTACTACAGGAATAGGTTAATAAACATATGGTGCAGAGATCACATTTTGCCATCTCCGTCAGCCATT CATATTCATGGAGTATTCTG
Downstream 100 bases:
>100_bases CCCCTGCTTACTGTTTTCAGCTGCAAGAGTTTACTGATTTTGAGTAATCAAAGCTTACTGACTTTCAATTGTCAAAGTAA GTCGATATTTGAGTATCAGA
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain Containing Protein; CBS Domain Protein; Signal Transduction Protein; Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRNLELFSTASIDHLMWSQKEYSANLDSPALSIFTDFDHSQPMVIDSSASAVDTADIMVKTHAFMRLVVDKSNRFLGVIT QYELSHSKMMKLATKNSGHISDLQVTDMMVPREDLMALDYHQVTTANVSDVVRALQENGLHHMLVIDHELHHIRGLIAAS DVARKLNIPIDIQQPPSFIQIFKATR
Sequences:
>Translated_186_residues MRNLELFSTASIDHLMWSQKEYSANLDSPALSIFTDFDHSQPMVIDSSASAVDTADIMVKTHAFMRLVVDKSNRFLGVIT QYELSHSKMMKLATKNSGHISDLQVTDMMVPREDLMALDYHQVTTANVSDVVRALQENGLHHMLVIDHELHHIRGLIAAS DVARKLNIPIDIQQPPSFIQIFKATR >Mature_186_residues MRNLELFSTASIDHLMWSQKEYSANLDSPALSIFTDFDHSQPMVIDSSASAVDTADIMVKTHAFMRLVVDKSNRFLGVIT QYELSHSKMMKLATKNSGHISDLQVTDMMVPREDLMALDYHQVTTANVSDVVRALQENGLHHMLVIDHELHHIRGLIAAS DVARKLNIPIDIQQPPSFIQIFKATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20983; Mature: 20983
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLELFSTASIDHLMWSQKEYSANLDSPALSIFTDFDHSQPMVIDSSASAVDTADIMVK CCCCCEEECCCHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHH THAFMRLVVDKSNRFLGVITQYELSHSKMMKLATKNSGHISDLQVTDMMVPREDLMALDY HHHHEEEEEECCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEHEECCHHHHHEECC HQVTTANVSDVVRALQENGLHHMLVIDHELHHIRGLIAASDVARKLNIPIDIQQPPSFIQ HHEEECCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHH IFKATR HEECCC >Mature Secondary Structure MRNLELFSTASIDHLMWSQKEYSANLDSPALSIFTDFDHSQPMVIDSSASAVDTADIMVK CCCCCEEECCCHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHH THAFMRLVVDKSNRFLGVITQYELSHSKMMKLATKNSGHISDLQVTDMMVPREDLMALDY HHHHEEEEEECCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEHEECCHHHHHEECC HQVTTANVSDVVRALQENGLHHMLVIDHELHHIRGLIAASDVARKLNIPIDIQQPPSFIQ HHEEECCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHH IFKATR HEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA