| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961048
Identifier: 157961048
GI number: 157961048
Start: 1485341
End: 1485868
Strand: Reverse
Name: 157961048
Synonym: Spea_1220
Alternate gene names: NA
Gene position: 1485868-1485341 (Counterclockwise)
Preceding gene: 157961049
Following gene: 157961047
Centisome position: 28.71
GC content: 46.97
Gene sequence:
>528_bases ATGATGCTTGTTTCAAATTCGCCTGCTTTAAATACGCCTGTTTTAAGTCCACTTGTTTCAAATCATAGCCCACAGCAAGT AGGCAACACGGCACAGGCAAATAACCTTAACCAAGTCCAGAAAAGTTCAAGTTCAAGTTCACCATTTAACAGCCAGCAAA CTCTTCAATCAAATGGTGCCGCCGTGGTACAAATCGATACCGTGACCCTTAGCGCTAAGTCTACAGCTCTTAGCGAGCAA GCTCTAGACGCCAATCCCCCACAAACACTCCCCGCACAGCCAAAGCAGCCTAACCAAGGGGAGAAAGTCGAAGGGTATGT GGAATATAAAAAAGCCAAGCTTCAGTACCAGATTTATGCAGACATGGCAGGGGTTGCCACAGGAAACGGCAATGGGCTCT CCCCTATAACGGCTTACTATCTATCAAACAATGACGATGCTCGAGCGGCGACGGTAAACGCTAAGTCCCAGCAACTACAG TTAGCAAGTATGCAAACCTACTGTAGAGACAAGCCAAAACGCTCATGA
Upstream 100 bases:
>100_bases CTCTAATACCAATTCTAAAGAAGCATTTAAAATCTGGTTCAGCTTATGTACAGCTATTAAACGCTAAGGTCATAATTATA AATAAGACTGACATGGAAAG
Downstream 100 bases:
>100_bases TAAATAATACCAATCAGTATAACCCTGACTAAATTTTGCAACTCACTCGAAGACAGTAAGGACAAACTTACTCTTTCTCT AAAATCCTATTGTTCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGAAVVQIDTVTLSAKSTALSEQ ALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYADMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQ LASMQTYCRDKPKRS
Sequences:
>Translated_175_residues MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGAAVVQIDTVTLSAKSTALSEQ ALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYADMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQ LASMQTYCRDKPKRS >Mature_175_residues MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGAAVVQIDTVTLSAKSTALSEQ ALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYADMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQ LASMQTYCRDKPKRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18629; Mature: 18629
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGA CEEECCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCC AVVQIDTVTLSAKSTALSEQALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYA EEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEHHEEEEEEEE DMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQLASMQTYCRDKPKRS CCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGA CEEECCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCC AVVQIDTVTLSAKSTALSEQALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYA EEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEHHEEEEEEEE DMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQLASMQTYCRDKPKRS CCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA