| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961047
Identifier: 157961047
GI number: 157961047
Start: 1484621
End: 1485064
Strand: Reverse
Name: 157961047
Synonym: Spea_1219
Alternate gene names: NA
Gene position: 1485064-1484621 (Counterclockwise)
Preceding gene: 157961048
Following gene: 157961042
Centisome position: 28.7
GC content: 41.67
Gene sequence:
>444_bases ATGAGTTTTAATATTAATCTCAGTTGGCATACATCTGCAGAGCCAGTTGTAGAACCACAAAGCTTCTGCCGAGATCACCA AATCACATTTGGCAGCGGTCAGCAAGTCCAGGGCTCATCCGCCCCTGAATATAGCGGCAATGCCGTTCATGTTAACCCAG AAGAAAGTCTACTCGCTGCGCTAAGCTCCTGCCATATGTTAACCTTCCTAACTATTGCGCATCTAAAGCGTCTGCCTATA ATCTCATATCAAGATAAAGCCTATGCAGAACTTGGTAAGAATGCAGCCGGAAAAATCTTTGTCAGTAAAATAGTCTTGAG CCCAATGGTTGAGTTTGCTACCGAAGTTGATCAAGACGTTATCGCCAAAATCCATGAAAAGTCTCACAGTAATTGTTTTA TTGCTAATAGCTTAAGCCCTGAGACAATATTTGAAATCAAATAA
Upstream 100 bases:
>100_bases TTTGCAGTTGCAACTTATTGACTCAAAGGGTTAGTTTAAATACTTTTCCCTAGTCGATAGGCAAGCATTTGTATATTCAT CTATTAAAAGAGTTATCAGT
Downstream 100 bases:
>100_bases GCGCTGTTAGAGCGGCTCTATCAGGCACAAAAAAAGCTAGGTGATAACCTAGCTTTTTTTGTGCCTGATAAATTAAGTGT TAGCCATCGTTTTCAACGAA
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein; OsmC/Ohr Family Protein; Osmc Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Regulator Of Disulfide Bond Formation; OsmC-Family Protein Like; Stress-Induced Protein OsmC-Like Protein; OsmC-Like Family; General Stress O
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSFNINLSWHTSAEPVVEPQSFCRDHQITFGSGQQVQGSSAPEYSGNAVHVNPEESLLAALSSCHMLTFLTIAHLKRLPI ISYQDKAYAELGKNAAGKIFVSKIVLSPMVEFATEVDQDVIAKIHEKSHSNCFIANSLSPETIFEIK
Sequences:
>Translated_147_residues MSFNINLSWHTSAEPVVEPQSFCRDHQITFGSGQQVQGSSAPEYSGNAVHVNPEESLLAALSSCHMLTFLTIAHLKRLPI ISYQDKAYAELGKNAAGKIFVSKIVLSPMVEFATEVDQDVIAKIHEKSHSNCFIANSLSPETIFEIK >Mature_146_residues SFNINLSWHTSAEPVVEPQSFCRDHQITFGSGQQVQGSSAPEYSGNAVHVNPEESLLAALSSCHMLTFLTIAHLKRLPII SYQDKAYAELGKNAAGKIFVSKIVLSPMVEFATEVDQDVIAKIHEKSHSNCFIANSLSPETIFEIK
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16162; Mature: 16031
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNINLSWHTSAEPVVEPQSFCRDHQITFGSGQQVQGSSAPEYSGNAVHVNPEESLLAA CEEEEEEEECCCCCCCCCHHHHHCCCCEECCCCCEECCCCCCCCCCCEEEECCHHHHHHH LSSCHMLTFLTIAHLKRLPIISYQDKAYAELGKNAAGKIFVSKIVLSPMVEFATEVDQDV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH IAKIHEKSHSNCFIANSLSPETIFEIK HHHHHHCCCCCEEEECCCCCCEEEEEC >Mature Secondary Structure SFNINLSWHTSAEPVVEPQSFCRDHQITFGSGQQVQGSSAPEYSGNAVHVNPEESLLAA EEEEEEEECCCCCCCCCHHHHHCCCCEECCCCCEECCCCCCCCCCCEEEECCHHHHHHH LSSCHMLTFLTIAHLKRLPIISYQDKAYAELGKNAAGKIFVSKIVLSPMVEFATEVDQDV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH IAKIHEKSHSNCFIANSLSPETIFEIK HHHHHHCCCCCEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA