| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is gltT [H]
Identifier: 157961034
GI number: 157961034
Start: 1467001
End: 1468251
Strand: Reverse
Name: gltT [H]
Synonym: Spea_1206
Alternate gene names: 157961034
Gene position: 1468251-1467001 (Counterclockwise)
Preceding gene: 157961042
Following gene: 157961033
Centisome position: 28.37
GC content: 47.32
Gene sequence:
>1251_bases ATGTGGCAAGCGATTAAAAACATCCCATTTTGGCAGAAGGTACTAGCAGCCTTTATATTGGGCGCCGGTGTTGGTGTCAT TTTCGGTGAGTCGGCAACTGTATTAAAGCCACTTGGCGATCTATTTATCAGCGCAATTAAGATGTTAGTTGCGCCACTCA TTTTCTGCGCCATCGTTGTCAGCATCACCTCTTTAGGCTCTGAAGTCAGTTTAAAAAGACTGAGCTTTAAAACCTTAGGC ATGTTCATGCTTACTGGCACTATAGCCTCTCTCATTGGATTAACCATTGGTTCTGTGATTGATATGGGCGGTTCGATGGA GCTGGTTGCTACTGAGGTTCGTGAACGCAATGTTCCGGGTTTTGCTCAAGTTTTATTGGATATGATCCCGGTTAACCCAT TTGCTTCGCTTGCCGAAGGTAAGGTGTTACAGATCATCGTCTTCGCTGCACTTATCGGTATTGCGATTAATAAAGTCGGC GAAAAAGCAGCCCCGCTAAAGCGTACGATTGAAGCAGGCGCTGAAGTGATGTTCCAACTTACTCGCATGGTACTGCAACT CACCCCAATTGGTGTGTTTGGTTTAATGGCTTGGGTAGTTGGCGAATACGGCTTATCGATGTTACTGCCTTTAGGTAAGT TTATTGGTGCTATTTATCTTGCTGCACTTATCCATATTATTTTCGTCTACGGTGGTTTGGTTAAGTTTGTCGCCAAGCTG AGTCCAGTACAATTTTTCCGTAAAGCGATACCAGCACAAATAGTGGCTTTCACCACGGCTTCAAGTTTTGGTACTTTGCC AGCAAGCACACGTTGCACCGAGTCTATGGGTGTCTCTAAGCGTTATGGCTCTTTCGTCCTGCCATTAGGTGCCACCATGA ACATGGATGGCTGTGGCGGTATTTACCCAGCGATTGCGGCTATTTTCATTGCGCAAATCTACGGTATTCCACTTGATATG ACTGACTATATGTTGATTGCCGTAACCGCGACCGTTGCCTCCGTTGGTACCGCTGGCGTACCTGGCAGCGCCATGGTTAT GCTCACAGTCACCTTGGGCGTTGTTGGTTTGCCACTTGAAGGCATCGCCTTTATCGCTGCAGTCGATCGCATTATCGATA TGATCCGCACCGCCACCAATGTCACCGGCGATATGATGACCGCTGTGGTGATTGGTAAGTCTGAAGGCCAGCTGGATGAA ACGCAGTTTTACACTCCAGAGAATGGCTCGCTAGAGCAGGCCAAGAGCTAA
Upstream 100 bases:
>100_bases AATGTAAATTTAAACAGTTATTGCCTGAAACTAATACTGGAGTGAACAAAGATTCACCCGTAGAGTAACTTGATAAAAAT TAAATAATTGGAATTCGATA
Downstream 100 bases:
>100_bases ACTCAGACATTTACTGAATAAAAAGGCCGCAATTGCGGCCTTTTTAATTTATACTTTTCAATATTATACTGGGTAACTAG GTTATTTTAGGAGCGGCTGG
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MWQAIKNIPFWQKVLAAFILGAGVGVIFGESATVLKPLGDLFISAIKMLVAPLIFCAIVVSITSLGSEVSLKRLSFKTLG MFMLTGTIASLIGLTIGSVIDMGGSMELVATEVRERNVPGFAQVLLDMIPVNPFASLAEGKVLQIIVFAALIGIAINKVG EKAAPLKRTIEAGAEVMFQLTRMVLQLTPIGVFGLMAWVVGEYGLSMLLPLGKFIGAIYLAALIHIIFVYGGLVKFVAKL SPVQFFRKAIPAQIVAFTTASSFGTLPASTRCTESMGVSKRYGSFVLPLGATMNMDGCGGIYPAIAAIFIAQIYGIPLDM TDYMLIAVTATVASVGTAGVPGSAMVMLTVTLGVVGLPLEGIAFIAAVDRIIDMIRTATNVTGDMMTAVVIGKSEGQLDE TQFYTPENGSLEQAKS
Sequences:
>Translated_416_residues MWQAIKNIPFWQKVLAAFILGAGVGVIFGESATVLKPLGDLFISAIKMLVAPLIFCAIVVSITSLGSEVSLKRLSFKTLG MFMLTGTIASLIGLTIGSVIDMGGSMELVATEVRERNVPGFAQVLLDMIPVNPFASLAEGKVLQIIVFAALIGIAINKVG EKAAPLKRTIEAGAEVMFQLTRMVLQLTPIGVFGLMAWVVGEYGLSMLLPLGKFIGAIYLAALIHIIFVYGGLVKFVAKL SPVQFFRKAIPAQIVAFTTASSFGTLPASTRCTESMGVSKRYGSFVLPLGATMNMDGCGGIYPAIAAIFIAQIYGIPLDM TDYMLIAVTATVASVGTAGVPGSAMVMLTVTLGVVGLPLEGIAFIAAVDRIIDMIRTATNVTGDMMTAVVIGKSEGQLDE TQFYTPENGSLEQAKS >Mature_416_residues MWQAIKNIPFWQKVLAAFILGAGVGVIFGESATVLKPLGDLFISAIKMLVAPLIFCAIVVSITSLGSEVSLKRLSFKTLG MFMLTGTIASLIGLTIGSVIDMGGSMELVATEVRERNVPGFAQVLLDMIPVNPFASLAEGKVLQIIVFAALIGIAINKVG EKAAPLKRTIEAGAEVMFQLTRMVLQLTPIGVFGLMAWVVGEYGLSMLLPLGKFIGAIYLAALIHIIFVYGGLVKFVAKL SPVQFFRKAIPAQIVAFTTASSFGTLPASTRCTESMGVSKRYGSFVLPLGATMNMDGCGGIYPAIAAIFIAQIYGIPLDM TDYMLIAVTATVASVGTAGVPGSAMVMLTVTLGVVGLPLEGIAFIAAVDRIIDMIRTATNVTGDMMTAVVIGKSEGQLDE TQFYTPENGSLEQAKS
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=301, Percent_Identity=35.2159468438538, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI194239697, Length=289, Percent_Identity=34.2560553633218, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI40254478, Length=282, Percent_Identity=35.4609929078014, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI66773030, Length=271, Percent_Identity=34.3173431734317, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI21314632, Length=436, Percent_Identity=28.6697247706422, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI169790839, Length=252, Percent_Identity=35.3174603174603, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI223468566, Length=313, Percent_Identity=33.2268370607029, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI223468564, Length=279, Percent_Identity=34.4086021505376, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI5032093, Length=311, Percent_Identity=33.4405144694534, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI301601644, Length=183, Percent_Identity=36.0655737704918, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI262359914, Length=180, Percent_Identity=32.7777777777778, Blast_Score=86, Evalue=9e-17, Organism=Escherichia coli, GI1790514, Length=422, Percent_Identity=36.4928909952607, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1789947, Length=416, Percent_Identity=31.7307692307692, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI1788024, Length=422, Percent_Identity=30.3317535545024, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1789473, Length=378, Percent_Identity=24.0740740740741, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71996953, Length=428, Percent_Identity=30.8411214953271, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71983106, Length=415, Percent_Identity=31.3253012048193, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI71983099, Length=415, Percent_Identity=31.3253012048193, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17537407, Length=384, Percent_Identity=30.9895833333333, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI193206505, Length=429, Percent_Identity=27.2727272727273, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI193206654, Length=420, Percent_Identity=28.3333333333333, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17541374, Length=392, Percent_Identity=27.2959183673469, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24583025, Length=403, Percent_Identity=26.0545905707196, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI17137668, Length=403, Percent_Identity=26.0545905707196, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24583023, Length=403, Percent_Identity=26.0545905707196, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI281360483, Length=429, Percent_Identity=27.039627039627, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI17137666, Length=429, Percent_Identity=27.039627039627, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI281360481, Length=429, Percent_Identity=27.039627039627, Blast_Score=99, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43838; Mature: 43838
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAIKNIPFWQKVLAAFILGAGVGVIFGESATVLKPLGDLFISAIKMLVAPLIFCAIVV CCCCCCCCCHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SITSLGSEVSLKRLSFKTLGMFMLTGTIASLIGLTIGSVIDMGGSMELVATEVRERNVPG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH FAQVLLDMIPVNPFASLAEGKVLQIIVFAALIGIAINKVGEKAAPLKRTIEAGAEVMFQL HHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TRMVLQLTPIGVFGLMAWVVGEYGLSMLLPLGKFIGAIYLAALIHIIFVYGGLVKFVAKL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPVQFFRKAIPAQIVAFTTASSFGTLPASTRCTESMGVSKRYGSFVLPLGATMNMDGCGG CHHHHHHHHCCHHHHHEEECCCCCCCCCCCHHHHHCCCHHHCCCEEEECCCEECCCCCCC IYPAIAAIFIAQIYGIPLDMTDYMLIAVTATVASVGTAGVPGSAMVMLTVTLGVVGLPLE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHH GIAFIAAVDRIIDMIRTATNVTGDMMTAVVIGKSEGQLDETQFYTPENGSLEQAKS HHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCEEECCCCCCHHCCCC >Mature Secondary Structure MWQAIKNIPFWQKVLAAFILGAGVGVIFGESATVLKPLGDLFISAIKMLVAPLIFCAIVV CCCCCCCCCHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SITSLGSEVSLKRLSFKTLGMFMLTGTIASLIGLTIGSVIDMGGSMELVATEVRERNVPG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH FAQVLLDMIPVNPFASLAEGKVLQIIVFAALIGIAINKVGEKAAPLKRTIEAGAEVMFQL HHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TRMVLQLTPIGVFGLMAWVVGEYGLSMLLPLGKFIGAIYLAALIHIIFVYGGLVKFVAKL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPVQFFRKAIPAQIVAFTTASSFGTLPASTRCTESMGVSKRYGSFVLPLGATMNMDGCGG CHHHHHHHHCCHHHHHEEECCCCCCCCCCCHHHHHCCCHHHCCCEEEECCCEECCCCCCC IYPAIAAIFIAQIYGIPLDMTDYMLIAVTATVASVGTAGVPGSAMVMLTVTLGVVGLPLE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHH GIAFIAAVDRIIDMIRTATNVTGDMMTAVVIGKSEGQLDETQFYTPENGSLEQAKS HHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]