| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961042
Identifier: 157961042
GI number: 157961042
Start: 1477295
End: 1477711
Strand: Reverse
Name: 157961042
Synonym: Spea_1214
Alternate gene names: NA
Gene position: 1477711-1477295 (Counterclockwise)
Preceding gene: 157961047
Following gene: 157961034
Centisome position: 28.56
GC content: 41.73
Gene sequence:
>417_bases ATGCCAAAAGACTATCTTCGCCCGTCTCTTAAAGATGATTCAAGTGTTAACCGAGCCCTTAGCAATATGCCTAAGAGCCA TGCCGATAGTTTTTCAGAACCTCAGCTACTCTACCTAAGGCGAGCATTAACCAACAACAGATGGCAAAAACATATGATAG ATAGTCGTGGTAGTTTCTATCTGCCTTTTCTGGGTTGGCGTTTTTTCTATGTATTCCTGCTTGGTCGTAACAATCGCGCT TACACTCGCAAGGAAAAGCAGCTTTCATTGGTCTTGTTTTTACTCAGCGTGCTGGCATTTATCTTGATATCACTCGCTTT TGGATTGCTACTTCTCTACCTATTAAAGTCTATGCTTGGTATCGATATTTTAGAGGGGACCTCCCTTGGTATTTGGGATT GGTTTAAATCGCTCTAA
Upstream 100 bases:
>100_bases TCATCGACATAAGACAAAATAACTAAAATAGTCCAAGTTCTATAACTGCTATGCTTAACTTTTAACCATCATGCGCAAAA TGAATGATCATGAGGAATGA
Downstream 100 bases:
>100_bases TAAAAGCGGTTGCTAGATGCTATAGCCAAGAGCACTAATCAAAAGAGCCTTAAGTGGTACTCTCTAAGCAAAACTTTTAG TAAAATATAACCCAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPKDYLRPSLKDDSSVNRALSNMPKSHADSFSEPQLLYLRRALTNNRWQKHMIDSRGSFYLPFLGWRFFYVFLLGRNNRA YTRKEKQLSLVLFLLSVLAFILISLAFGLLLLYLLKSMLGIDILEGTSLGIWDWFKSL
Sequences:
>Translated_138_residues MPKDYLRPSLKDDSSVNRALSNMPKSHADSFSEPQLLYLRRALTNNRWQKHMIDSRGSFYLPFLGWRFFYVFLLGRNNRA YTRKEKQLSLVLFLLSVLAFILISLAFGLLLLYLLKSMLGIDILEGTSLGIWDWFKSL >Mature_137_residues PKDYLRPSLKDDSSVNRALSNMPKSHADSFSEPQLLYLRRALTNNRWQKHMIDSRGSFYLPFLGWRFFYVFLLGRNNRAY TRKEKQLSLVLFLLSVLAFILISLAFGLLLLYLLKSMLGIDILEGTSLGIWDWFKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16140; Mature: 16009
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDYLRPSLKDDSSVNRALSNMPKSHADSFSEPQLLYLRRALTNNRWQKHMIDSRGSFY CCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEE LPFLGWRFFYVFLLGRNNRAYTRKEKQLSLVLFLLSVLAFILISLAFGLLLLYLLKSMLG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDILEGTSLGIWDWFKSL CCHHCCCCCCHHHHHHCC >Mature Secondary Structure PKDYLRPSLKDDSSVNRALSNMPKSHADSFSEPQLLYLRRALTNNRWQKHMIDSRGSFY CCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEE LPFLGWRFFYVFLLGRNNRAYTRKEKQLSLVLFLLSVLAFILISLAFGLLLLYLLKSMLG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDILEGTSLGIWDWFKSL CCHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA