| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yjaG [H]
Identifier: 157961007
GI number: 157961007
Start: 1429957
End: 1430562
Strand: Reverse
Name: yjaG [H]
Synonym: Spea_1179
Alternate gene names: 157961007
Gene position: 1430562-1429957 (Counterclockwise)
Preceding gene: 157961008
Following gene: 157961005
Centisome position: 27.65
GC content: 41.42
Gene sequence:
>606_bases ATGACAAACAAACAGGGATTTTTTAAACGTTTAAAAGCATTAGAGTTACCCCAGAAAAAGCTTTTTGCGGTTGCCCTATG CCAACGCATGCTACCTAACTATCAGCTTTTTTCTGAAGTGTGCGAATTTGGCGATCCAAAAGTACTCGACACCTTGCTTA ATCTACTTTGGCAATCGATGTACGATAACAAGCTCAAGCTGAACATAGATATCTACCTTGAACGCCTTGAAGACAATACC CCTGAACCAAGCGACTTTGATGTTTACGGTGTGTATCCAGCTATGGATGCCGCAGTTGCATTAACCTCACTTATCAGTGC GCTACAGAGCAAAGTCGAAGAAGATATTACTAACATTAGTAAACTATCTTCATCCACAGTTGCTAACTACATCGAAGCAA CCTGTGAGCAGGAGTTCAAAAACGAAGACGAGCTCGATGACTATATCTTCGGCCACGAAGTGATGCAGGAAGAGAAAGAG ATGCAAGAATCTCTTTTACAAATCATCGAGGAAAACCCATCAATGAAGGCCGACTTCATTAAAGGTTTGCGTAAAGAAAT CGTTGAGATCGGTGTATCAAATATTGGTATCGAAGCGAGCCGATAA
Upstream 100 bases:
>100_bases GAAGATGTAGAACCGGAAATACTAGAGTTACTTGACGAGCTAACTAAGGTAGAATCTGCCGCTAATCAAGTGATCTCCCA GCTATCAGTGGATATATAAG
Downstream 100 bases:
>100_bases GTCTAATCAGCCATACTTAAATGTCTGAAGCACGATCACTCTAAAGCGCATAAGGTTAATCACCTTGTGCGCTTTTTTGT AACAGGTTTAAGCCCGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTNKQGFFKRLKALELPQKKLFAVALCQRMLPNYQLFSEVCEFGDPKVLDTLLNLLWQSMYDNKLKLNIDIYLERLEDNT PEPSDFDVYGVYPAMDAAVALTSLISALQSKVEEDITNISKLSSSTVANYIEATCEQEFKNEDELDDYIFGHEVMQEEKE MQESLLQIIEENPSMKADFIKGLRKEIVEIGVSNIGIEASR
Sequences:
>Translated_201_residues MTNKQGFFKRLKALELPQKKLFAVALCQRMLPNYQLFSEVCEFGDPKVLDTLLNLLWQSMYDNKLKLNIDIYLERLEDNT PEPSDFDVYGVYPAMDAAVALTSLISALQSKVEEDITNISKLSSSTVANYIEATCEQEFKNEDELDDYIFGHEVMQEEKE MQESLLQIIEENPSMKADFIKGLRKEIVEIGVSNIGIEASR >Mature_200_residues TNKQGFFKRLKALELPQKKLFAVALCQRMLPNYQLFSEVCEFGDPKVLDTLLNLLWQSMYDNKLKLNIDIYLERLEDNTP EPSDFDVYGVYPAMDAAVALTSLISALQSKVEEDITNISKLSSSTVANYIEATCEQEFKNEDELDDYIFGHEVMQEEKEM QESLLQIIEENPSMKADFIKGLRKEIVEIGVSNIGIEASR
Specific function: Unknown
COG id: COG3068
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0431 [H]
Homologues:
Organism=Escherichia coli, GI1790432, Length=189, Percent_Identity=37.037037037037, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007338 [H]
Pfam domain/function: PF04222 DUF416 [H]
EC number: NA
Molecular weight: Translated: 22991; Mature: 22860
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKQGFFKRLKALELPQKKLFAVALCQRMLPNYQLFSEVCEFGDPKVLDTLLNLLWQSM CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH YDNKLKLNIDIYLERLEDNTPEPSDFDVYGVYPAMDAAVALTSLISALQSKVEEDITNIS CCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLSSSTVANYIEATCEQEFKNEDELDDYIFGHEVMQEEKEMQESLLQIIEENPSMKADFI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KGLRKEIVEIGVSNIGIEASR HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNKQGFFKRLKALELPQKKLFAVALCQRMLPNYQLFSEVCEFGDPKVLDTLLNLLWQSM CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH YDNKLKLNIDIYLERLEDNTPEPSDFDVYGVYPAMDAAVALTSLISALQSKVEEDITNIS CCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLSSSTVANYIEATCEQEFKNEDELDDYIFGHEVMQEEKEMQESLLQIIEENPSMKADFI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KGLRKEIVEIGVSNIGIEASR HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]