| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is phoA [H]
Identifier: 157960973
GI number: 157960973
Start: 1382441
End: 1383940
Strand: Reverse
Name: phoA [H]
Synonym: Spea_1145
Alternate gene names: 157960973
Gene position: 1383940-1382441 (Counterclockwise)
Preceding gene: 157960974
Following gene: 157960972
Centisome position: 26.74
GC content: 48.87
Gene sequence:
>1500_bases GTGAATAATATCAAAAAAATAGCTGTGATTATCTCATCCGCTCTAGCAACTTTCGCGGCCAATGCTGCTGTATTGCCCAG CAGCCAAACTGACAGTCAATGGTACCAAGACAGCGCCAAGCTCGTCAGTGAAAAAACCAAACAAACGAGTGCTACAACAG CTAAAAACGTCATTCTATTTGTCGGTGACGGTATGGGAGTATCGACACTCACTGCGGCACGTATTTTTGAAGGACAACAA CAAGCTAATAACCAAGGCGGAGAGGAAAATTTCCTAAGCTTTGAGCTGTTCCCAAAAACGGCGCTAGTTAAAACCTACAA CACCAATCAGCAAACACCCGACTCAGCAGGCACCATGACGGCTATCGCTACTGGCGTAAAATCTAAGGCGGGTGTGTTAT CGGTATCAGATACCAGCCTTAGAGCCAATTGCTTATCTTCAAAGGGTAATGAACTGGTGACCTTAGTCGATTTAGCCAAT GCCAAAGGACTCTCTACTGGCATTGTTAGTACGGCGAGGATCACCCATGCAACGCCAGCAGCAACTTATGCCACCTCTCC TGAGCGTAATTGGGAGGCCGACTCAAACCTTCCCACAGAAGCCGTTGCCAACGAGTGCAAGGATATTGCTTATCAACTGG TGATGCGTGATGAAGTTGACGCGCTGACGGTTGCCTTAGGTGGCGGACGTAGAAACTTCATCCCCAGTGATATGACCGAC GGCGAAGATAAGGCTGGTCGCCGTGAAGATGGTTTAGATCTAACAAAGTCTTGGACTGACAACCTGAGTAACTCGGCTTA CGTTTGGGACAAAGCGGGATTCGACGCTGTCGATGTCGCCTCGACCGATCATCTGCTTGGCTTATTTAATTCGTCACATA TGCAGTATGAAGCCGACCGTTTAGATGACACAGCAGGAGAGCCCTCGTTAACCGAGATGACCACTAAATCGATAGAACTG CTCAATAAAAATGACCAAGGTTACTTATTGATAGTGGAATCGGGTCGAATCGATCACGCTCACCATGCCGGTAATGCCTA TCGCGCCATGATGGATACTGTTGAGCTTTCGAATGCCGTTCGCGCCGCGGTCGAAAACACCAATCCTGAAGAAACCTTAA TCATGGTCACCGCCGACCATAGTCACGTATTTACCATTGCGGGTTATCCAAAGCGTGGCAACCCAATATTAGGCCTAGTG CATGGTATCGATGGCAGTGTCACTATCGCCAAAGACGGTAAACCCTATACCACAGTTGGCTACACCAATGGCCCTGGAGC CGTGGTCGGTCTTCGCGATGACCTAAGCTCTGTCGATACTCAAGATAAAGAGTTTATGCAGCAAGCGCTCGTGCCAATGG GCAGTGAAACTCACGCTGGCGAAGATATTACTCTGCACGCTACAGGAGCGGGGTCAGATCTCGTTCAGGGCGTAATGGAG CAAAACGTTATCTTCCACATCATCAACCAGGCCCAATCCCTCGGTGGCACCAAATACTAA
Upstream 100 bases:
>100_bases ACCGACATAAATCCGACTCAATAGCGTCATACTTTTGCCCGACAATCACCAAGCCACAAAGGAATCTACCTATAAACCTT ACAAATTTTCGGTGATAATA
Downstream 100 bases:
>100_bases CCAATGAGTACTCATATCAGCAGTACGAATTAACTACTGACACTCACTGACGAATCCGTCAGCACGAGTACCCATTTATG GAGTTAAAAATGAACAAGAA
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MNNIKKIAVIISSALATFAANAAVLPSSQTDSQWYQDSAKLVSEKTKQTSATTAKNVILFVGDGMGVSTLTAARIFEGQQ QANNQGGEENFLSFELFPKTALVKTYNTNQQTPDSAGTMTAIATGVKSKAGVLSVSDTSLRANCLSSKGNELVTLVDLAN AKGLSTGIVSTARITHATPAATYATSPERNWEADSNLPTEAVANECKDIAYQLVMRDEVDALTVALGGGRRNFIPSDMTD GEDKAGRREDGLDLTKSWTDNLSNSAYVWDKAGFDAVDVASTDHLLGLFNSSHMQYEADRLDDTAGEPSLTEMTTKSIEL LNKNDQGYLLIVESGRIDHAHHAGNAYRAMMDTVELSNAVRAAVENTNPEETLIMVTADHSHVFTIAGYPKRGNPILGLV HGIDGSVTIAKDGKPYTTVGYTNGPGAVVGLRDDLSSVDTQDKEFMQQALVPMGSETHAGEDITLHATGAGSDLVQGVME QNVIFHIINQAQSLGGTKY
Sequences:
>Translated_499_residues MNNIKKIAVIISSALATFAANAAVLPSSQTDSQWYQDSAKLVSEKTKQTSATTAKNVILFVGDGMGVSTLTAARIFEGQQ QANNQGGEENFLSFELFPKTALVKTYNTNQQTPDSAGTMTAIATGVKSKAGVLSVSDTSLRANCLSSKGNELVTLVDLAN AKGLSTGIVSTARITHATPAATYATSPERNWEADSNLPTEAVANECKDIAYQLVMRDEVDALTVALGGGRRNFIPSDMTD GEDKAGRREDGLDLTKSWTDNLSNSAYVWDKAGFDAVDVASTDHLLGLFNSSHMQYEADRLDDTAGEPSLTEMTTKSIEL LNKNDQGYLLIVESGRIDHAHHAGNAYRAMMDTVELSNAVRAAVENTNPEETLIMVTADHSHVFTIAGYPKRGNPILGLV HGIDGSVTIAKDGKPYTTVGYTNGPGAVVGLRDDLSSVDTQDKEFMQQALVPMGSETHAGEDITLHATGAGSDLVQGVME QNVIFHIINQAQSLGGTKY >Mature_499_residues MNNIKKIAVIISSALATFAANAAVLPSSQTDSQWYQDSAKLVSEKTKQTSATTAKNVILFVGDGMGVSTLTAARIFEGQQ QANNQGGEENFLSFELFPKTALVKTYNTNQQTPDSAGTMTAIATGVKSKAGVLSVSDTSLRANCLSSKGNELVTLVDLAN AKGLSTGIVSTARITHATPAATYATSPERNWEADSNLPTEAVANECKDIAYQLVMRDEVDALTVALGGGRRNFIPSDMTD GEDKAGRREDGLDLTKSWTDNLSNSAYVWDKAGFDAVDVASTDHLLGLFNSSHMQYEADRLDDTAGEPSLTEMTTKSIEL LNKNDQGYLLIVESGRIDHAHHAGNAYRAMMDTVELSNAVRAAVENTNPEETLIMVTADHSHVFTIAGYPKRGNPILGLV HGIDGSVTIAKDGKPYTTVGYTNGPGAVVGLRDDLSSVDTQDKEFMQQALVPMGSETHAGEDITLHATGAGSDLVQGVME QNVIFHIINQAQSLGGTKY
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=504, Percent_Identity=42.4603174603175, Blast_Score=387, Evalue=1e-107, Organism=Homo sapiens, GI294660770, Length=449, Percent_Identity=44.543429844098, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI157266296, Length=481, Percent_Identity=40.1247401247401, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI94721246, Length=470, Percent_Identity=41.063829787234, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI157266292, Length=481, Percent_Identity=39.9168399168399, Blast_Score=351, Evalue=1e-96, Organism=Homo sapiens, GI294660772, Length=403, Percent_Identity=43.1761786600496, Blast_Score=323, Evalue=2e-88, Organism=Escherichia coli, GI48994877, Length=394, Percent_Identity=31.9796954314721, Blast_Score=125, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6320689, Length=350, Percent_Identity=29.1428571428571, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355149, Length=489, Percent_Identity=40.2862985685072, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI21355981, Length=482, Percent_Identity=39.6265560165975, Blast_Score=323, Evalue=1e-88, Organism=Drosophila melanogaster, GI19921912, Length=492, Percent_Identity=40.0406504065041, Blast_Score=323, Evalue=2e-88, Organism=Drosophila melanogaster, GI21355151, Length=480, Percent_Identity=40, Blast_Score=313, Evalue=2e-85, Organism=Drosophila melanogaster, GI24585213, Length=498, Percent_Identity=38.5542168674699, Blast_Score=305, Evalue=6e-83, Organism=Drosophila melanogaster, GI24651554, Length=489, Percent_Identity=38.241308793456, Blast_Score=300, Evalue=2e-81, Organism=Drosophila melanogaster, GI85725200, Length=458, Percent_Identity=38.4279475982533, Blast_Score=298, Evalue=4e-81, Organism=Drosophila melanogaster, GI85815833, Length=458, Percent_Identity=38.4279475982533, Blast_Score=298, Evalue=4e-81, Organism=Drosophila melanogaster, GI21358067, Length=476, Percent_Identity=38.655462184874, Blast_Score=298, Evalue=7e-81, Organism=Drosophila melanogaster, GI24657842, Length=499, Percent_Identity=36.2725450901804, Blast_Score=289, Evalue=4e-78, Organism=Drosophila melanogaster, GI24657835, Length=498, Percent_Identity=35.9437751004016, Blast_Score=287, Evalue=1e-77, Organism=Drosophila melanogaster, GI24657827, Length=482, Percent_Identity=37.344398340249, Blast_Score=286, Evalue=2e-77, Organism=Drosophila melanogaster, GI24651556, Length=463, Percent_Identity=38.0129589632829, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI18859923, Length=478, Percent_Identity=34.1004184100418, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24645593, Length=313, Percent_Identity=27.4760383386581, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 53160; Mature: 53160
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIKKIAVIISSALATFAANAAVLPSSQTDSQWYQDSAKLVSEKTKQTSATTAKNVILF CCCHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VGDGMGVSTLTAARIFEGQQQANNQGGEENFLSFELFPKTALVKTYNTNQQTPDSAGTMT EECCCCHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCHH AIATGVKSKAGVLSVSDTSLRANCLSSKGNELVTLVDLANAKGLSTGIVSTARITHATPA HHHHCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCC ATYATSPERNWEADSNLPTEAVANECKDIAYQLVMRDEVDALTVALGGGRRNFIPSDMTD CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC GEDKAGRREDGLDLTKSWTDNLSNSAYVWDKAGFDAVDVASTDHLLGLFNSSHMQYEADR CCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEECCCCCHHEEEECCCCCEEEHHH LDDTAGEPSLTEMTTKSIELLNKNDQGYLLIVESGRIDHAHHAGNAYRAMMDTVELSNAV CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHH RAAVENTNPEETLIMVTADHSHVFTIAGYPKRGNPILGLVHGIDGSVTIAKDGKPYTTVG HHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCEEEEE YTNGPGAVVGLRDDLSSVDTQDKEFMQQALVPMGSETHAGEDITLHATGAGSDLVQGVME EECCCCEEEEEHHCHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHH QNVIFHIINQAQSLGGTKY CCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNNIKKIAVIISSALATFAANAAVLPSSQTDSQWYQDSAKLVSEKTKQTSATTAKNVILF CCCHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VGDGMGVSTLTAARIFEGQQQANNQGGEENFLSFELFPKTALVKTYNTNQQTPDSAGTMT EECCCCHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCHH AIATGVKSKAGVLSVSDTSLRANCLSSKGNELVTLVDLANAKGLSTGIVSTARITHATPA HHHHCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCC ATYATSPERNWEADSNLPTEAVANECKDIAYQLVMRDEVDALTVALGGGRRNFIPSDMTD CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC GEDKAGRREDGLDLTKSWTDNLSNSAYVWDKAGFDAVDVASTDHLLGLFNSSHMQYEADR CCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEECCCCCHHEEEECCCCCEEEHHH LDDTAGEPSLTEMTTKSIELLNKNDQGYLLIVESGRIDHAHHAGNAYRAMMDTVELSNAV CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHH RAAVENTNPEETLIMVTADHSHVFTIAGYPKRGNPILGLVHGIDGSVTIAKDGKPYTTVG HHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCEEEEE YTNGPGAVVGLRDDLSSVDTQDKEFMQQALVPMGSETHAGEDITLHATGAGSDLVQGVME EECCCCEEEEEHHCHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHH QNVIFHIINQAQSLGGTKY CCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]