| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is phoA [H]
Identifier: 157960972
GI number: 157960972
Start: 1380744
End: 1382351
Strand: Reverse
Name: phoA [H]
Synonym: Spea_1144
Alternate gene names: 157960972
Gene position: 1382351-1380744 (Counterclockwise)
Preceding gene: 157960973
Following gene: 157960971
Centisome position: 26.71
GC content: 51.24
Gene sequence:
>1608_bases ATGAACAAGAAATTACTGGTACTATCAATTACAGCTATGTTGGGCCTAGCCGCTTGTGGCGATGATGGTGACAAAGGCGC CGATGGTAACGATGGTCAAGATTGGACTGCGGTCAACCAATGGTTCGTTGACGGTCAATCCCGCGTCACGAAGGCACAAG AGCTAAGCGTTAATAATGAAGCTGGCGCCGCAAAAAACATCATTCTATTTGTGGGTGATGGCATGGGCGTATCAACTGTA ACTGCGGCGCGGATCCTAGAAGGACAATTAAAAGGGCAAACCGGTGAAGAAAACTCGCTGTCTTTTGAGACCTTACCTTA TGTCGGCCTAGCCAAAACCTACAACGTCGACGGCCAAACACCGGACTCTGCGGGCACCATGACTGCCATGGTCACCGGCG TTAAAACTGATGTGGGCGTGATTTCACAAGCTGAAGGGGTAACTCGCGGTAACTGCGCCTCGACCGATGGCCAAAACTTA GTGACCTCGCTTGAACTGGCGGCAATGGCCGGCTTATCGACCGGCGTTGTCTCTACTGCACGCATTACTCACGCAACTCC AGCGGCAGCTTATGCCCATGCCCCCGAGCGTAACTGGGAAAGTGATGCTGACTTACCCGATGAAGCCATCACTAATGGTT GTAGTGACATCGCATCGCAGCTTCTAAGCTTTGATTATGGCGCGGGGCTCAATGTGGTCATGGGCGGAGGCCGTCGCGCA TTTATCCCTAACACTGTGACTGACACAGAAGGTAAAGCCGGTAAGCGATTAGATAGTCGCGATCTCACCTCTGAGTGGCT AACGAAATATACCAACAGTGCGTATGTCGCCAGTAGAGATGAGTTCTTAGCACTCGATCCTGCTACTACCGACCATGCTC TTGGCTTATTTAATTCATCACATATGGAGTATGAACTCGACCGCACTACGGATGGGGTCACGGGCGAACCTTCATTGGCT GAAATGACCGCCAAGTCTATCGATATATTGCAGAAAAACGATAAAGGTTTTGTGCTAATTATTGAAGCAGGACGCATCGA CCATGCTCACCATGCTGGCAACGCCGCCCGCGCTTTACACGACACTATCGCACTGTCTGAAGCGGTGCGCGTCGCCATGG AAAAAACCTCTGAAAAAGACACCCTGTTAATGGTTACCGCAGATCACAGCCATGTATTTACCATTGCAGGCTACCCCACT CGCGGCAATCCAATTTTAGGCCTAGTGAAAGGTAACGGCGCTGACGGACAGCCTGCCGTGACTAATGCAACCGATGCCAA TGGTTTACCTTACACCACTGTCGGTTATGCCAACGGTCTTGGTTACGCCAATCTTGAAACCGGTGGTGATGAGCGTTATG GCTACGCAGCGGCGCCCGGGCGATTTGACCTCAATTATGTCGATACTCAAAGCGCGGGTTTTCACCAAGAAGCACTCGTG CCCCTTGGCAGCGAAACCCATGCGGGTGAAGACGTAGGGATTTTTGCAAGCGGCCCCGGTGCTCACTTAGTGCAAGGCAC GGTTGAACAAAATCATCTTTTCCATGTGATGAATCATGCTGGCAGCTTAGTCGAAAAAGCTGAGGCGGCTCAGTCAACTT CGAATTAA
Upstream 100 bases:
>100_bases CCAAATACTAACCAATGAGTACTCATATCAGCAGTACGAATTAACTACTGACACTCACTGACGAATCCGTCAGCACGAGT ACCCATTTATGGAGTTAAAA
Downstream 100 bases:
>100_bases CGACCTTAGCGCCATGAATTGCCACCGAGAAGTCACTCGGTGGCCTGACGCTATGCCAACTCTATCCCATTTCACTAGGG CGTTATCCGAGGCTTTATGT
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MNKKLLVLSITAMLGLAACGDDGDKGADGNDGQDWTAVNQWFVDGQSRVTKAQELSVNNEAGAAKNIILFVGDGMGVSTV TAARILEGQLKGQTGEENSLSFETLPYVGLAKTYNVDGQTPDSAGTMTAMVTGVKTDVGVISQAEGVTRGNCASTDGQNL VTSLELAAMAGLSTGVVSTARITHATPAAAYAHAPERNWESDADLPDEAITNGCSDIASQLLSFDYGAGLNVVMGGGRRA FIPNTVTDTEGKAGKRLDSRDLTSEWLTKYTNSAYVASRDEFLALDPATTDHALGLFNSSHMEYELDRTTDGVTGEPSLA EMTAKSIDILQKNDKGFVLIIEAGRIDHAHHAGNAARALHDTIALSEAVRVAMEKTSEKDTLLMVTADHSHVFTIAGYPT RGNPILGLVKGNGADGQPAVTNATDANGLPYTTVGYANGLGYANLETGGDERYGYAAAPGRFDLNYVDTQSAGFHQEALV PLGSETHAGEDVGIFASGPGAHLVQGTVEQNHLFHVMNHAGSLVEKAEAAQSTSN
Sequences:
>Translated_535_residues MNKKLLVLSITAMLGLAACGDDGDKGADGNDGQDWTAVNQWFVDGQSRVTKAQELSVNNEAGAAKNIILFVGDGMGVSTV TAARILEGQLKGQTGEENSLSFETLPYVGLAKTYNVDGQTPDSAGTMTAMVTGVKTDVGVISQAEGVTRGNCASTDGQNL VTSLELAAMAGLSTGVVSTARITHATPAAAYAHAPERNWESDADLPDEAITNGCSDIASQLLSFDYGAGLNVVMGGGRRA FIPNTVTDTEGKAGKRLDSRDLTSEWLTKYTNSAYVASRDEFLALDPATTDHALGLFNSSHMEYELDRTTDGVTGEPSLA EMTAKSIDILQKNDKGFVLIIEAGRIDHAHHAGNAARALHDTIALSEAVRVAMEKTSEKDTLLMVTADHSHVFTIAGYPT RGNPILGLVKGNGADGQPAVTNATDANGLPYTTVGYANGLGYANLETGGDERYGYAAAPGRFDLNYVDTQSAGFHQEALV PLGSETHAGEDVGIFASGPGAHLVQGTVEQNHLFHVMNHAGSLVEKAEAAQSTSN >Mature_535_residues MNKKLLVLSITAMLGLAACGDDGDKGADGNDGQDWTAVNQWFVDGQSRVTKAQELSVNNEAGAAKNIILFVGDGMGVSTV TAARILEGQLKGQTGEENSLSFETLPYVGLAKTYNVDGQTPDSAGTMTAMVTGVKTDVGVISQAEGVTRGNCASTDGQNL VTSLELAAMAGLSTGVVSTARITHATPAAAYAHAPERNWESDADLPDEAITNGCSDIASQLLSFDYGAGLNVVMGGGRRA FIPNTVTDTEGKAGKRLDSRDLTSEWLTKYTNSAYVASRDEFLALDPATTDHALGLFNSSHMEYELDRTTDGVTGEPSLA EMTAKSIDILQKNDKGFVLIIEAGRIDHAHHAGNAARALHDTIALSEAVRVAMEKTSEKDTLLMVTADHSHVFTIAGYPT RGNPILGLVKGNGADGQPAVTNATDANGLPYTTVGYANGLGYANLETGGDERYGYAAAPGRFDLNYVDTQSAGFHQEALV PLGSETHAGEDVGIFASGPGAHLVQGTVEQNHLFHVMNHAGSLVEKAEAAQSTSN
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=491, Percent_Identity=43.9918533604888, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI294660770, Length=463, Percent_Identity=44.4924406047516, Blast_Score=384, Evalue=1e-106, Organism=Homo sapiens, GI157266296, Length=468, Percent_Identity=44.8717948717949, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI94721246, Length=468, Percent_Identity=44.4444444444444, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI157266292, Length=467, Percent_Identity=43.4689507494647, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI294660772, Length=419, Percent_Identity=42.7207637231504, Blast_Score=328, Evalue=8e-90, Organism=Escherichia coli, GI48994877, Length=491, Percent_Identity=30.3462321792261, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320689, Length=356, Percent_Identity=30.6179775280899, Blast_Score=114, Evalue=3e-26, Organism=Drosophila melanogaster, GI21358067, Length=525, Percent_Identity=41.3333333333333, Blast_Score=358, Evalue=6e-99, Organism=Drosophila melanogaster, GI21355149, Length=545, Percent_Identity=40.5504587155963, Blast_Score=356, Evalue=2e-98, Organism=Drosophila melanogaster, GI85725200, Length=471, Percent_Identity=42.0382165605096, Blast_Score=342, Evalue=4e-94, Organism=Drosophila melanogaster, GI85815833, Length=471, Percent_Identity=42.0382165605096, Blast_Score=342, Evalue=4e-94, Organism=Drosophila melanogaster, GI21355151, Length=493, Percent_Identity=40.973630831643, Blast_Score=338, Evalue=7e-93, Organism=Drosophila melanogaster, GI21355981, Length=499, Percent_Identity=41.6833667334669, Blast_Score=334, Evalue=1e-91, Organism=Drosophila melanogaster, GI19921912, Length=496, Percent_Identity=40.9274193548387, Blast_Score=326, Evalue=3e-89, Organism=Drosophila melanogaster, GI24657842, Length=487, Percent_Identity=38.8090349075975, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24651554, Length=531, Percent_Identity=38.9830508474576, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24657835, Length=489, Percent_Identity=39.4683026584867, Blast_Score=314, Evalue=8e-86, Organism=Drosophila melanogaster, GI24657827, Length=473, Percent_Identity=39.5348837209302, Blast_Score=302, Evalue=5e-82, Organism=Drosophila melanogaster, GI24585213, Length=501, Percent_Identity=38.12375249501, Blast_Score=300, Evalue=2e-81, Organism=Drosophila melanogaster, GI24651556, Length=467, Percent_Identity=40.2569593147752, Blast_Score=292, Evalue=4e-79, Organism=Drosophila melanogaster, GI18859923, Length=491, Percent_Identity=35.234215885947, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI24645593, Length=403, Percent_Identity=26.5508684863524, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 55955; Mature: 55955
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLVLSITAMLGLAACGDDGDKGADGNDGQDWTAVNQWFVDGQSRVTKAQELSVNNE CCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEECCHHHHHHHHHCCCCCC AGAAKNIILFVGDGMGVSTVTAARILEGQLKGQTGEENSLSFETLPYVGLAKTYNVDGQT CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECEEEECCCCCC PDSAGTMTAMVTGVKTDVGVISQAEGVTRGNCASTDGQNLVTSLELAAMAGLSTGVVSTA CCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE RITHATPAAAYAHAPERNWESDADLPDEAITNGCSDIASQLLSFDYGAGLNVVMGGGRRA EEECCCCHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCEEE FIPNTVTDTEGKAGKRLDSRDLTSEWLTKYTNSAYVASRDEFLALDPATTDHALGLFNSS ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCHHEEEECCC HMEYELDRTTDGVTGEPSLAEMTAKSIDILQKNDKGFVLIIEAGRIDHAHHAGNAARALH CCEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHCCCHHHHHH DTIALSEAVRVAMEKTSEKDTLLMVTADHSHVFTIAGYPTRGNPILGLVKGNGADGQPAV HHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCC TNATDANGLPYTTVGYANGLGYANLETGGDERYGYAAAPGRFDLNYVDTQSAGFHQEALV CCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCEEECCCCEECEEECCCCCCCCHHHCC PLGSETHAGEDVGIFASGPGAHLVQGTVEQNHLFHVMNHAGSLVEKAEAAQSTSN CCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKKLLVLSITAMLGLAACGDDGDKGADGNDGQDWTAVNQWFVDGQSRVTKAQELSVNNE CCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEECCHHHHHHHHHCCCCCC AGAAKNIILFVGDGMGVSTVTAARILEGQLKGQTGEENSLSFETLPYVGLAKTYNVDGQT CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECEEEECCCCCC PDSAGTMTAMVTGVKTDVGVISQAEGVTRGNCASTDGQNLVTSLELAAMAGLSTGVVSTA CCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE RITHATPAAAYAHAPERNWESDADLPDEAITNGCSDIASQLLSFDYGAGLNVVMGGGRRA EEECCCCHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCEEE FIPNTVTDTEGKAGKRLDSRDLTSEWLTKYTNSAYVASRDEFLALDPATTDHALGLFNSS ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCHHEEEECCC HMEYELDRTTDGVTGEPSLAEMTAKSIDILQKNDKGFVLIIEAGRIDHAHHAGNAARALH CCEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHCCCHHHHHH DTIALSEAVRVAMEKTSEKDTLLMVTADHSHVFTIAGYPTRGNPILGLVKGNGADGQPAV HHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCC TNATDANGLPYTTVGYANGLGYANLETGGDERYGYAAAPGRFDLNYVDTQSAGFHQEALV CCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCEEECCCCEECEEECCCCCCCCHHHCC PLGSETHAGEDVGIFASGPGAHLVQGTVEQNHLFHVMNHAGSLVEKAEAAQSTSN CCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]