| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960971
Identifier: 157960971
GI number: 157960971
Start: 1379729
End: 1380616
Strand: Reverse
Name: 157960971
Synonym: Spea_1143
Alternate gene names: NA
Gene position: 1380616-1379729 (Counterclockwise)
Preceding gene: 157960972
Following gene: 157960969
Centisome position: 26.68
GC content: 44.82
Gene sequence:
>888_bases ATGCTAGTTTCATTTTGTTCACGAGCGGCTGAGCCTCAGGCCAGCATCAGCCAAACCGAGAAGTCGATTGTCGACAAATC GATTATCAATAAATCAATAATCAAGACGTCAATGACCAAAGCTGCCTTCTTCACAAGCCTCATCAGCCTTTGCGCCACAA GCCTCACTGCAGCGAATGCCACAGAGCTTAGCTGCAATGATATTGACGCCAACCATCTGAGCGCGACATACAAGGTACAC CATGCATCTGGTCAACAAAGTACAATGACCTTACTCAGAAACAAAGATCAAGTGATCTACCAACGCAGCCCCGTTAGTTT TGAAATGTGGAATAAACAAGGGGAGTACGTACGTTACTTCCCAGAGCAGCAGCGCTCAATCTCCTACCGTAAAGGCGATT TACGCTCACTCAATATGCACTTTGACTTTGAGCAATTAAACCATCTTGTATCAACAAGCCTTATCAGCAAGCTCACTCAG AGTGAACAAGCAATCCAGCCAATCGCTGCTGACAGAGAAAATCAAATTACGGCACTTGAGTGTTTAAATGCAAACCGCTA TCACGGTGCGCTACATCTAAGCCAAGTTCAACTTGTTTGGGCTGAAAAAATCGCCTTACCCGTCACTATGGACGTTACTA TGGATATGCAACAAGCTAACCAAAAAGTAAGTTATCAATTAACGTCGTTAAAAGCCCTTTCTAATGATGATTTTACCAGT TTGATTTCAGGCTATCGAGATATGGACTTTGCCGATGTCGGTGATAATGAGTCCGATCCCTTTATCGCCAAGATGATCCA TCAAGGCTTTATTCAACATGGCAGCTCGGGCTTCTATGACAGCCAAGGTAATCAGCTCTCTGGCGGTGATAGCGGCCACC AGCATTAG
Upstream 100 bases:
>100_bases AGAAGTCACTCGGTGGCCTGACGCTATGCCAACTCTATCCCATTTCACTAGGGCGTTATCCGAGGCTTTATGTCTTTGTT TGTCCCCAGTAGGAGCATAT
Downstream 100 bases:
>100_bases CGATTAGCCTAAAGTAAAAGATCCACCTTCTGAAGAAGGTGGCTTTGCCCATCTGTTATAAAGCAGACTCCCTAAAAGGA AGCTTTCCTACCGTGCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MLVSFCSRAAEPQASISQTEKSIVDKSIINKSIIKTSMTKAAFFTSLISLCATSLTAANATELSCNDIDANHLSATYKVH HASGQQSTMTLLRNKDQVIYQRSPVSFEMWNKQGEYVRYFPEQQRSISYRKGDLRSLNMHFDFEQLNHLVSTSLISKLTQ SEQAIQPIAADRENQITALECLNANRYHGALHLSQVQLVWAEKIALPVTMDVTMDMQQANQKVSYQLTSLKALSNDDFTS LISGYRDMDFADVGDNESDPFIAKMIHQGFIQHGSSGFYDSQGNQLSGGDSGHQH
Sequences:
>Translated_295_residues MLVSFCSRAAEPQASISQTEKSIVDKSIINKSIIKTSMTKAAFFTSLISLCATSLTAANATELSCNDIDANHLSATYKVH HASGQQSTMTLLRNKDQVIYQRSPVSFEMWNKQGEYVRYFPEQQRSISYRKGDLRSLNMHFDFEQLNHLVSTSLISKLTQ SEQAIQPIAADRENQITALECLNANRYHGALHLSQVQLVWAEKIALPVTMDVTMDMQQANQKVSYQLTSLKALSNDDFTS LISGYRDMDFADVGDNESDPFIAKMIHQGFIQHGSSGFYDSQGNQLSGGDSGHQH >Mature_295_residues MLVSFCSRAAEPQASISQTEKSIVDKSIINKSIIKTSMTKAAFFTSLISLCATSLTAANATELSCNDIDANHLSATYKVH HASGQQSTMTLLRNKDQVIYQRSPVSFEMWNKQGEYVRYFPEQQRSISYRKGDLRSLNMHFDFEQLNHLVSTSLISKLTQ SEQAIQPIAADRENQITALECLNANRYHGALHLSQVQLVWAEKIALPVTMDVTMDMQQANQKVSYQLTSLKALSNDDFTS LISGYRDMDFADVGDNESDPFIAKMIHQGFIQHGSSGFYDSQGNQLSGGDSGHQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32902; Mature: 32902
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSFCSRAAEPQASISQTEKSIVDKSIINKSIIKTSMTKAAFFTSLISLCATSLTAANA CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TELSCNDIDANHLSATYKVHHASGQQSTMTLLRNKDQVIYQRSPVSFEMWNKQGEYVRYF CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEECCCCCCEEEEC PEQQRSISYRKGDLRSLNMHFDFEQLNHLVSTSLISKLTQSEQAIQPIAADRENQITALE CHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEE CLNANRYHGALHLSQVQLVWAEKIALPVTMDVTMDMQQANQKVSYQLTSLKALSNDDFTS CCCCCCCCCEEEHHHHHHHHHHHHEEEEEEEEEECHHHHCCHHHHHHHHHHHCCCCCHHH LISGYRDMDFADVGDNESDPFIAKMIHQGFIQHGSSGFYDSQGNQLSGGDSGHQH HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVSFCSRAAEPQASISQTEKSIVDKSIINKSIIKTSMTKAAFFTSLISLCATSLTAANA CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TELSCNDIDANHLSATYKVHHASGQQSTMTLLRNKDQVIYQRSPVSFEMWNKQGEYVRYF CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEECCCCCCEEEEC PEQQRSISYRKGDLRSLNMHFDFEQLNHLVSTSLISKLTQSEQAIQPIAADRENQITALE CHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEE CLNANRYHGALHLSQVQLVWAEKIALPVTMDVTMDMQQANQKVSYQLTSLKALSNDDFTS CCCCCCCCCEEEHHHHHHHHHHHHEEEEEEEEEECHHHHCCHHHHHHHHHHHCCCCCHHH LISGYRDMDFADVGDNESDPFIAKMIHQGFIQHGSSGFYDSQGNQLSGGDSGHQH HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA