| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yicG [C]
Identifier: 157960969
GI number: 157960969
Start: 1377216
End: 1377854
Strand: Reverse
Name: yicG [C]
Synonym: Spea_1141
Alternate gene names: 157960969
Gene position: 1377854-1377216 (Counterclockwise)
Preceding gene: 157960971
Following gene: 157960964
Centisome position: 26.63
GC content: 43.66
Gene sequence:
>639_bases ATGTTAGAAGTTAAAGTTATCAGCTTTTTATGGTTAATCGGTATTTTGGCCGAAGCAATGACAGGTGCACTGGCTGCTGG TAAAAAACAGATGGACCTGTTTGGCGTAGTCATTATAGGCTGTGTTACCGCGATTGGTGGTGGCACGTTGCGCGATATTT TGCTCGGCAACTACCCATTAATCTGGATTGAGAATGTCCATTACTTGATTGCCATTGCTGCTGCCTCTTTACTTACAGTA ATGATCGCTCCAGTTATGCGTCACCTGTCTAAACTCTTTCTCGCAATCGATGCGATAGGTTTAGCCGTGTTCTCGATTAT CGGTGCACAGAAAACCTTATTGTTAGGCTTTAGTCCTGAAATTGCGATTGTGATGGGTGTAGTAACAGGCGTATTTGGCG GCGTGATCCGCGATATTCTTTGTAATCAAGTGCCACTTATCTTCAAGAAAGAGCTCTATGCATTGGTCGCGTTATTGACG GCATCGGCTTACGTCGCCATGAAGTTTAATGGTGTACCCGAGTGGCTTAACCTTTCAATATCTCTGATCTTTGGCTTTAG CTTCAGAATGCTCGCCATTCGCTATAAGTGGTCAATGCCTAAATTTGATTATCAGTATCAGTCTGATAACGCCCATTAG
Upstream 100 bases:
>100_bases ATTCATTAGAAAATGTAATGCATCAATTTAACTTTTATCATTGTATTTTTGATCTAAAAAGAGGCAAAATCCACCTCCTT TTATTTAGCTAGTGCAAATT
Downstream 100 bases:
>100_bases GTTTAATAAGAAATTCTAATAAAAAGGTCGGCATATGCCGACCTTTTTATTATCCAATATCTACTGGCTTTGTTTAAGCC GCAGGGGTCTCTTTTACATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLEVKVISFLWLIGILAEAMTGALAAGKKQMDLFGVVIIGCVTAIGGGTLRDILLGNYPLIWIENVHYLIAIAAASLLTV MIAPVMRHLSKLFLAIDAIGLAVFSIIGAQKTLLLGFSPEIAIVMGVVTGVFGGVIRDILCNQVPLIFKKELYALVALLT ASAYVAMKFNGVPEWLNLSISLIFGFSFRMLAIRYKWSMPKFDYQYQSDNAH
Sequences:
>Translated_212_residues MLEVKVISFLWLIGILAEAMTGALAAGKKQMDLFGVVIIGCVTAIGGGTLRDILLGNYPLIWIENVHYLIAIAAASLLTV MIAPVMRHLSKLFLAIDAIGLAVFSIIGAQKTLLLGFSPEIAIVMGVVTGVFGGVIRDILCNQVPLIFKKELYALVALLT ASAYVAMKFNGVPEWLNLSISLIFGFSFRMLAIRYKWSMPKFDYQYQSDNAH >Mature_212_residues MLEVKVISFLWLIGILAEAMTGALAAGKKQMDLFGVVIIGCVTAIGGGTLRDILLGNYPLIWIENVHYLIAIAAASLLTV MIAPVMRHLSKLFLAIDAIGLAVFSIIGAQKTLLLGFSPEIAIVMGVVTGVFGGVIRDILCNQVPLIFKKELYALVALLT ASAYVAMKFNGVPEWLNLSISLIFGFSFRMLAIRYKWSMPKFDYQYQSDNAH
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=200, Percent_Identity=52.5, Blast_Score=201, Evalue=3e-53, Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=36.3636363636364, Blast_Score=108, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 23128; Mature: 23128
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVKVISFLWLIGILAEAMTGALAAGKKQMDLFGVVIIGCVTAIGGGTLRDILLGNYPL CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCE IWIENVHYLIAIAAASLLTVMIAPVMRHLSKLFLAIDAIGLAVFSIIGAQKTLLLGFSPE EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH IAIVMGVVTGVFGGVIRDILCNQVPLIFKKELYALVALLTASAYVAMKFNGVPEWLNLSI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH SLIFGFSFRMLAIRYKWSMPKFDYQYQSDNAH HHHHHHHHHHHHEEEECCCCCCCCEECCCCCC >Mature Secondary Structure MLEVKVISFLWLIGILAEAMTGALAAGKKQMDLFGVVIIGCVTAIGGGTLRDILLGNYPL CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCE IWIENVHYLIAIAAASLLTVMIAPVMRHLSKLFLAIDAIGLAVFSIIGAQKTLLLGFSPE EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH IAIVMGVVTGVFGGVIRDILCNQVPLIFKKELYALVALLTASAYVAMKFNGVPEWLNLSI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH SLIFGFSFRMLAIRYKWSMPKFDYQYQSDNAH HHHHHHHHHHHHEEEECCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]