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The map label for this gene is yeeY [H]

Identifier: 157960964

GI number: 157960964

Start: 1371822

End: 1372700

Strand: Reverse

Name: yeeY [H]

Synonym: Spea_1136

Alternate gene names: 157960964

Gene position: 1372700-1371822 (Counterclockwise)

Preceding gene: 157960969

Following gene: 157960962

Centisome position: 26.53

GC content: 45.16

Gene sequence:

>879_bases
ATGTTGACCATTGAACAGCTCTATTCATTTGTAACGACCGTCGAAACAGGCTCCTTTTCTGCAGCAGCGAGAAAGCTTGG
CAAGGTACAGTCTGCGATTAGTCAGCACATTATCAATCTCGAAATCGACACCAACCAAACCCTGTTTGATAGAAGCCACC
GTTACCCCATTTTGACACGTGCAGGCGAGCAGTTATTGCCTCAGGCCAAAGCTGTGCTGGCACAGCATCAACGTCTTAAC
TTGCAGGTACTCGCGCTGGATAAACAAGATAATTTAAAGCTCACCCTTGCCGTTGATGAAGGGATCCCCTATAACAAATT
CACAGCTTTACTCAGCAGCCTCTCGAACCAATACCCCGAATGCGAGCTGGAATTACTTTGTGCTTCCAGTCTAGATATCA
TTCATCTCGTGGATACCAAACGAGCCGACCTAGGTATTGTCTTTAGCGAACTAACATACTCTGAGAGTCTCGATTTCGAG
TCACTCGGAACAGTAAAGTTTGAATTACTGGTGAACCCAAACCATCCTCTTGCTCAGGAAACCTCGTCGCACATTGATGT
GCTCAAACTCCACAGACAGTTAGTCATTGGCTCGAAAGCAAAACAAAAGGGTTGGTTTAATACCCCCCACTCTCCCGATG
TATGGCATGCCGATAACTATTACATGTTACTCGAACTCGCTAAAGCAGGCTTTGGTTGGGCGCTATTACCACTTCACCTT
TGTGAAGAAGCTATAGCGGCTCAACAACTCTGTAAGCTTAAGATTGATTTTGAGCAATTGGGTTGGCAAGCAAACGTCGA
TGTTATTCAACATAAAAGCCGCGCTGAAAATGAGTTCAATAAAGAAGTCAGAGCGTTAATGCGCGGATTACTTACCTAA

Upstream 100 bases:

>100_bases
CTGTCTTTAACTGTCATGATAAATAACCCTAAATTAAGTTGCAGCTATTATCATCTTTATCTACGATACATGAAAATTAG
ATACCATCACTTTTACTGAT

Downstream 100 bases:

>100_bases
AGAATCTCGACTTATTCAGCTGTGAACTAGAGGGGTTACCTAAAAAAATAGGTATAAAAAAACGGCCTGATGGCCGTTTT
TTCGTTACTGGAAGCTAAGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTRAGEQLLPQAKAVLAQHQRLN
LQVLALDKQDNLKLTLAVDEGIPYNKFTALLSSLSNQYPECELELLCASSLDIIHLVDTKRADLGIVFSELTYSESLDFE
SLGTVKFELLVNPNHPLAQETSSHIDVLKLHRQLVIGSKAKQKGWFNTPHSPDVWHADNYYMLLELAKAGFGWALLPLHL
CEEAIAAQQLCKLKIDFEQLGWQANVDVIQHKSRAENEFNKEVRALMRGLLT

Sequences:

>Translated_292_residues
MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTRAGEQLLPQAKAVLAQHQRLN
LQVLALDKQDNLKLTLAVDEGIPYNKFTALLSSLSNQYPECELELLCASSLDIIHLVDTKRADLGIVFSELTYSESLDFE
SLGTVKFELLVNPNHPLAQETSSHIDVLKLHRQLVIGSKAKQKGWFNTPHSPDVWHADNYYMLLELAKAGFGWALLPLHL
CEEAIAAQQLCKLKIDFEQLGWQANVDVIQHKSRAENEFNKEVRALMRGLLT
>Mature_292_residues
MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTRAGEQLLPQAKAVLAQHQRLN
LQVLALDKQDNLKLTLAVDEGIPYNKFTALLSSLSNQYPECELELLCASSLDIIHLVDTKRADLGIVFSELTYSESLDFE
SLGTVKFELLVNPNHPLAQETSSHIDVLKLHRQLVIGSKAKQKGWFNTPHSPDVWHADNYYMLLELAKAGFGWALLPLHL
CEEAIAAQQLCKLKIDFEQLGWQANVDVIQHKSRAENEFNKEVRALMRGLLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=244, Percent_Identity=28.2786885245902, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI145693105, Length=243, Percent_Identity=25.9259259259259, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1786401, Length=263, Percent_Identity=27.7566539923954, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786508, Length=262, Percent_Identity=24.0458015267176, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786713, Length=267, Percent_Identity=26.5917602996255, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789492, Length=258, Percent_Identity=25.5813953488372, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32887; Mature: 32887

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHCCCCCCHHHH
AGEQLLPQAKAVLAQHQRLNLQVLALDKQDNLKLTLAVDEGIPYNKFTALLSSLSNQYPE
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC
CELELLCASSLDIIHLVDTKRADLGIVFSELTYSESLDFESLGTVKFELLVNPNHPLAQE
CEEEEEECCCCCEEEEECCCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCCCHHH
TSSHIDVLKLHRQLVIGSKAKQKGWFNTPHSPDVWHADNYYMLLELAKAGFGWALLPLHL
HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEECCCCEEEEEHHHCCCCHHHHHHHH
CEEAIAAQQLCKLKIDFEQLGWQANVDVIQHKSRAENEFNKEVRALMRGLLT
HHHHHHHHHHHHEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHCCCCCCHHHH
AGEQLLPQAKAVLAQHQRLNLQVLALDKQDNLKLTLAVDEGIPYNKFTALLSSLSNQYPE
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC
CELELLCASSLDIIHLVDTKRADLGIVFSELTYSESLDFESLGTVKFELLVNPNHPLAQE
CEEEEEECCCCCEEEEECCCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCCCHHH
TSSHIDVLKLHRQLVIGSKAKQKGWFNTPHSPDVWHADNYYMLLELAKAGFGWALLPLHL
HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEECCCCEEEEEHHHCCCCHHHHHHHH
CEEAIAAQQLCKLKIDFEQLGWQANVDVIQHKSRAENEFNKEVRALMRGLLT
HHHHHHHHHHHHEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]