| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960827
Identifier: 157960827
GI number: 157960827
Start: 1216341
End: 1216730
Strand: Reverse
Name: 157960827
Synonym: Spea_0999
Alternate gene names: NA
Gene position: 1216730-1216341 (Counterclockwise)
Preceding gene: 157960828
Following gene: 157960826
Centisome position: 23.51
GC content: 41.54
Gene sequence:
>390_bases TTGTTCGATAATATCCATGTTTCGTTAACTACGCCTGCCTTACTCTTTCCGGCGATCTCTTTGCTACTGCTGGCTTATAC CAATCGTTTCTTTGCCTTAGCGGCGCTTATTCGTAACTTGAGTAATGATGGTAAGCCAATCCATAACAGCCAGTTAAAGA ATCTTCGTCAAAGGATCAGCATCATTAGGCGTATGCAGGAGTCAGGTGCTTTAAGCTTCGCCTTGTGTGTATTGTGTATG ATCTTTATCTACATTGGCTTTAACAAGGTGGGCGCTTTTATCTTTGGTTGCAGCCTATTCTTACTACTTTATTCACTGTT ACTTTCGGTTATTGAGATCCGTATATCGGTCGATGCCCTCAATATTCATCTTGAAGAGATGGACAGATGA
Upstream 100 bases:
>100_bases TGCTTATTTACCCACAGGATTGTAATCATCTTGTATAAATTGTTGGCATTGGTATTATCCCTAAAACTCTTGTGTTGACT CGTTTATAGGGCTGAATCCA
Downstream 100 bases:
>100_bases TCGATTGGATCTATTTCTTCGACTTGTGTGGTACCGCGGTATTTGCCCTGTCAGGCGCATTAGCTGCTGGCAGGCACAAG ATGGACCCTTTTGGGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MFDNIHVSLTTPALLFPAISLLLLAYTNRFFALAALIRNLSNDGKPIHNSQLKNLRQRISIIRRMQESGALSFALCVLCM IFIYIGFNKVGAFIFGCSLFLLLYSLLLSVIEIRISVDALNIHLEEMDR
Sequences:
>Translated_129_residues MFDNIHVSLTTPALLFPAISLLLLAYTNRFFALAALIRNLSNDGKPIHNSQLKNLRQRISIIRRMQESGALSFALCVLCM IFIYIGFNKVGAFIFGCSLFLLLYSLLLSVIEIRISVDALNIHLEEMDR >Mature_129_residues MFDNIHVSLTTPALLFPAISLLLLAYTNRFFALAALIRNLSNDGKPIHNSQLKNLRQRISIIRRMQESGALSFALCVLCM IFIYIGFNKVGAFIFGCSLFLLLYSLLLSVIEIRISVDALNIHLEEMDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14591; Mature: 14591
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDNIHVSLTTPALLFPAISLLLLAYTNRFFALAALIRNLSNDGKPIHNSQLKNLRQRIS CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IIRRMQESGALSFALCVLCMIFIYIGFNKVGAFIFGCSLFLLLYSLLLSVIEIRISVDAL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIHLEEMDR HHHHHHHCC >Mature Secondary Structure MFDNIHVSLTTPALLFPAISLLLLAYTNRFFALAALIRNLSNDGKPIHNSQLKNLRQRIS CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IIRRMQESGALSFALCVLCMIFIYIGFNKVGAFIFGCSLFLLLYSLLLSVIEIRISVDAL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIHLEEMDR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA